BGIOSGA017538

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Revision as of 02:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017538| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017538, complete gene.| tag = OsI_210...")
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Gene Name

BGIOSGA017538

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017538, complete gene.

LocusTag

OsI_21041

Ensembl Transcript ID

BGIOSGA017538-TA

Ensembl Protein ID

BGIOSGA017538-PA

Length

5518

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29687436..29692953

Sequence Coding Region

29691733..29692953,29690203..29690487,29689826..29689888,29689703..29689749,29689544..29689613
,29689182..29689244,29688870..29688908,29688561..29688788,29688239..29688324
,29688105..29688153,29687912..29687992,29687721..29687814,29687436..29687557

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29687436..29692953 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29687436..29692953 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAGTCTTCTGCGGGGACATGATCCCGGTAGAGTTGTGGTGGGAGATCCTGCTCAGGGCACCAACCAAAGACGTCGCCCGGTCAAGCTGCGTGTCAACGCAGTGGCGCGGCATCGTCAGCGACCCCTCCTTTCGGAAGCTCCACCATGACAGGCATGCCGTGCCCAACCTCAACGACGGCATCTCCGACACTTTGCTCGTCGCCACGTCTGACGTCGACGGTGAAAGCGTCTCCAGCGTCTTCCCGGCTGCACTGGTCTCTCCGGCGGTGACGGGCCAGGCGCCCATCTGCCGGGTCAACAACCCATACGGCTACAGCCTCACCAACGTCTGCAATGGATTCCTCTGCTTCGCCTCCTGGAGCAGAGCCAAGGTCATCGTGTGCAACCCCGTCACCGGCGAGAAGCTGGCGCTCCCCAGGGCTCCTCACCTTGGACTCGAGAAGCGTCGACGTTACTCGCGGCCGGTCACGTTCGCCTTGGGGTACACGCTTGCCGCTGCTGGCGGTTGGCGCCAACACCCGTTTCCTCACCCGTACCGCGTGGTACAAAATACGCCAACTATTGTTGTAGGTGGTAAGATATGCATGCTGACAGCCAACCCGGCGTCGCATCAGCACCCAAACGATGTTGGCAAACCCGGTCCGGTGATGGTTGTCGATGTCGCAAGCGAGGAGTACCGCACGTACAACCCAGCGGACTATGGGTGCCTGTGGGCCGACATGGCAGTGAGCGGCTTTGAGCTGCACGGACGGCTATGCCTGGCCATCAGGTCTGATACGGAAATCCATTTCTGGAAAATGCCTGTTGAAGAAATATCCATGCGTGCTTGGCTCGATGGTGATACCCACACGTTGTGCTACGGAGTGGACAATAAGTTGTACTCCAGGTATGTCGGCACAACCATGACGATGACAACATCGCTGGCGGCACGGTGTCTTTCTCCGACCGAGGTTATGTCATGGGACTGCAAAATCCGTCTCCCTACGACTCCACCGTGGTTAGTGTCGTGCAACTGGAACATCTACACGGGATACCGCCCCAGCCTGCTCTCGCCTCTCACCTTTGCGTCCCAGCAAGATAACAACGACGATGATGAAGATGAAGGCGACGAGTCCCGTCCATTCGTCCGCAGATTGTTGTGTGCACTACGACACCAGAAATCGCAGAAACGCCGCATGTCTCCAACATCAACCGATCATACCAACGGCAAGAGAAACGAACGCTCAGGGACAACAGATCGATACACAACACGAGTGAAGGTACACAAGCTAATCGGAGCATCCCGTGATATGCTAGCATACTACTTAACCGTCGTCAGGCAGAAGCAGCAAGGCCGTCGAGTCGTCGCTCAATCGCTCATCAGTGTGTCGTCATCAGGTGAAAACCCTCCCGGCGTGCGCCGTAGTCATCGCCGGCAGATCAACCTCCCGGAGATCGGTCTTCAAGCCCTTGCCGGCGGCATTCGCCAGCGGGTGGATGCCGTGATCCGGGCCGCTCATGTAGCTAACATTTTTACTCTGTATGATGTTTCAAACATCTGGCGTGTTCCTCTGTTATTGCGGGACCAAAAGGCAGATCAAGCTATTCTTAAAGTTTTGAATCTTGAAAGCGTTGCCGAAGAGCCTAACTTGGAGGAATGGATGGCAAGGGCTGATCTATATGACACTTTACATGAAACAGTCAGGATTGCCATGGTTGGAAAATATACCGGTGTATCTGATACATACCTTTCTGTGATGAAGGCACCTGATGCTTACAGCACAGCATGGAGTTTACTGAGGGGTGCAGATGGCATTTTAGTACCTGGTGGCTTTGGAGAAAGAGGTGTTGAGGGGAAAATATTGGCTACCAAGCACGCCCGCGAAAACGATGTCCCTTTCCTGGGCATATGCCTTGGCATGCAGCTCGCCGTGGTAGAATTCGCATGCCATGTTTTGAAACTGCCTGATGCGAACAGCACAGAGTTTGATGCCAAAACGGAGAACCCATGTGTAATTATAATGCCAGAGTGCTCCAACGAAGGAAAGGGTGGTACCATGCGGCGTGGATCAAAGAGGACATTTTTCAAGGTTGCAAATAGCAAGTCTGCCAAGCTATATGGTAGCGTCAACCACATAGATGAGAGGTTTCGGCACAGATACCAGGTAAATCCCAATGTGGTGCAATTATTTGAGAACAATGGGCTTCAGGTTGTAGGCACAGACAAGACCGGAGAAATTGTGCAGATCGTCGAAATACCCAATCATCGATTTTTCGTTGGCGTTCAATTTCACCCCGAGTTTATGTCGAGACCTTCGAAACCTTCCGCACTTTTTGTCGGACTAATCGCTGCATCGTGTGGGCAACTGGATGGTGTGCTGCAAGATGCGGCTTGTAACCATGAGCCACAGCAGAATCAGCGTGCAGAGAAGCGTCCTGCTGCTAGTGATCTAGGAGATTGA</cdnaseq>

Protein Sequence

<aaseq>MAAVFCGDMIPVELWWEILLRAPTKDVARSSCVSTQWRGIVSDPSFRKLHHDRHAVPNLNDGISDTLLVATSDVDGESVSSVFPAALVSPAVTGQAPICRVNNPYGYSLTNVCNGFLCFASWSRAKVIVCNPVTGEKLALPRAPHLGLEKRRRYSRPVTFALGYTLAAAGGWRQHPFPHPYRVVQNTPTIVVGGKICMLTANPASHQHPNDVGKPGPVMVVDVASEEYRTYNPADYGCLWADMAVSGFELHGRLCLAIRSDTEIHFWKMPVEEISMRAWLDGDTHTLCYGVDNKLYSRYVGTTMTMTTSLAARCLSPTEVMSWDCKIRLPTTPPWLVSCNWNIYTGYRPSLLSPLTFASQQDNNDDDEDEGDESRPFVRRLLCALRHQKSQKRRMSPTSTDHTNGKRNERSGTTDRYTTRVKVHKLIGASRDMLAYYLTVVRQKQQGRRVVAQSLISVSSSGENPPGVRRSHRRQINLPEIGLQALAGGIRQRVDAVIRAAHVANIFTLYDVSNIWRVPLLLRDQKADQAILKVLNLESVAEEPNLEEWMARADLYDTLHETVRIAMVGKYTGVSDTYLSVMKAPDAYSTAWSLLRGADGILVPGGFGERGVEGKILATKHARENDVPFLGICLGMQLAVVEFACHVLKLPDANSTEFDAKTENPCVIIMPECSNEGKGGTMRRGSKRTFFKVANSKSAKLYGSVNHIDERFRHRYQVNPNVVQLFENNGLQVVGTDKTGEIVQIVEIPNHRFFVGVQFHPEFMSRPSKPSALFVGLIAASCGQLDGVLQDAACNHEPQQNQRAEKRPAASDLGD</aaseq>

Gene Sequence

<dnaseqindica>1..1221#2467..2751#3066..3128#3205..3251#3341..3410#3710..3772#4046..4084#4166..4393#4630..4715#4801..4849#4962..5042#5140..5233#5397..5518#ATGGCGGCAGTCTTCTGCGGGGACATGATCCCGGTAGAGTTGTGGTGGGAGATCCTGCTCAGGGCACCAACCAAAGACGTCGCCCGGTCAAGCTGCGTGTCAACGCAGTGGCGCGGCATCGTCAGCGACCCCTCCTTTCGGAAGCTCCACCATGACAGGCATGCCGTGCCCAACCTCAACGACGGCATCTCCGACACTTTGCTCGTCGCCACGTCTGACGTCGACGGTGAAAGCGTCTCCAGCGTCTTCCCGGCTGCACTGGTCTCTCCGGCGGTGACGGGCCAGGCGCCCATCTGCCGGGTCAACAACCCATACGGCTACAGCCTCACCAACGTCTGCAATGGATTCCTCTGCTTCGCCTCCTGGAGCAGAGCCAAGGTCATCGTGTGCAACCCCGTCACCGGCGAGAAGCTGGCGCTCCCCAGGGCTCCTCACCTTGGACTCGAGAAGCGTCGACGTTACTCGCGGCCGGTCACGTTCGCCTTGGGGTACACGCTTGCCGCTGCTGGCGGTTGGCGCCAACACCCGTTTCCTCACCCGTACCGCGTGGTACAAAATACGCCAACTATTGTTGTAGGTGGTAAGATATGCATGCTGACAGCCAACCCGGCGTCGCATCAGCACCCAAACGATGTTGGCAAACCCGGTCCGGTGATGGTTGTCGATGTCGCAAGCGAGGAGTACCGCACGTACAACCCAGCGGACTATGGGTGCCTGTGGGCCGACATGGCAGTGAGCGGCTTTGAGCTGCACGGACGGCTATGCCTGGCCATCAGGTCTGATACGGAAATCCATTTCTGGAAAATGCCTGTTGAAGAAATATCCATGCGTGCTTGGCTCGATGGTGATACCCACACGTTGTGCTACGGAGTGGACAATAAGTTGTACTCCAGGTATGTCGGCACAACCATGACGATGACAACATCGCTGGCGGCACGGTGTCTTTCTCCGACCGAGGTTATGTCATGGGACTGCAAAATCCGTCTCCCTACGACTCCACCGTGGTTAGTGTCGTGCAACTGGAACATCTACACGGGATACCGCCCCAGCCTGCTCTCGCCTCTCACCTTTGCGTCCCAGCAAGATAACAACGACGATGATGAAGATGAAGGCGACGAGTCCCGTCCATTCGTCCGCAGATTGTTGTGTGCACTACGACACCAGAAATCGCAGAAACGCCGCATGTCTCCAACATCAACCGATCATACCAACGGCAAGAGAGTTTACTATAGAAATCCATGCATATGCTAATGTAAATATGTAATTCCCCGATCCTCGTTGACAATATTCACATAGAAATTGTATTTTAAGCAGTACAAACAATACATAAACTTATTTATGTGGTGGATTCAATCAATCCTTTCCGGCCCAAAAAATATGGCCCACGTAGACCACATCCCCTTTTAGGCGGCCCATCGAGCTAGCGGCCAGACCGTACTTGTACCGTCTATTTGAATTTTTTTCATTTTTAAATTTTTTTCTTTTAATATTTACATAAATAATCTATGGCGCAAAAAATTACAAAAATAAACCTAGGGCGGCAAACTGACGTGGCATCTGCAAAAATTACATTTAGCCCCTTGCCGCCCTCTGTAAGGGTTGCAAGAGGCTAAATGCAATTTTCGTAGCCCTAAAGAGCATTTGGCTGGTACTTTTGCATCTGGGCCCCTTACCGCCCAGATGCAAAAAGTACCAAGGGCGGCAAAAGTCCCACATACAAAAAGTATCAGCCAAAAAGTATTAGGCCCGGGTTGGCTTTTTTTCATGTGAAAAAAAAAACCCTCTCTCTCCCGTCACCGCCCGTCTGCCGTCACCGCCCGTCCCTCTCCTATTTGCAACGTCAGCTTGCCGCCCGTCTGCCGTTACCGCCCGTCCCTCCCCCGTTTGCCACGTCAGCTTACCGCCCTAATGAAGGGCAGTAGGGTCTATTTTTGTAATTTTTTGCGCCGATGGATTATTTCTGTAAATATTAAAAGAAAAAAATTTAAAAATGAAAAAAATTCCCGTCGCTTTCAACTCGCAGCGCTGATACCTGGCCGTCTCCGGGGGATCGGTGACCACTACGGCGTCCTGGCGCTGTGGAACCCGCTCCACGCGCCGTTACGCGACAGCGCGTGCACCGTACAGCGGTGTGGCCCTTGAGATCCAAAAGGCATCAAGACAGGTAACCACAACCCTCTAAAAAAGAAAAATATTTGGAAAATATTTGCCCCTTCGTGTGAGAGTTCTGTGTCGTCGTACGTACGTGCGTGGTGACGTGTAGACTCGGGGAGACGTGAGACGAGTCAACACAGTACAGATGGGGAGACGTGAGACGAGTCGAGACAGGTACAGATGTCACGTTTTGAACTAGCTATACACAACCTGTTCTGTTGTTCTTGTGTTCATCTCCATGAACCGATATGCAAGCTGCTAGAAAAGAGGCTACAGGTACTACAGTCGGATACTCTAGTGTGCTTCTTTCAGAACGAACGCTCAGGGACAACAGATCGATACACAACACGAGTGAAGGTACACAAGCTAATCGGAGCATCCCGTGATATGCTAGCATACTACTTAACCGTCGTCAGGCAGAAGCAGCAAGGCCGTCGAGTCGTCGCTCAATCGCTCATCAGTGTGTCGTCATCAGGTGAAAACCCTCCCGGCGTGCGCCGTAGTCATCGCCGGCAGATCAACCTCCCGGAGATCGGTCTTCAAGCCCTTGCCGGCGGCATTCGCCAGCGGGTGGATGCCGTGATCCGGGCCGCTCATGTACGCTCGGTTCTCCCTCTCCTTGTCGAACGACACGCTGAACTTCTCCTCCACACCTGCAATGCACGCACCAATCACCAACACAAGTAGTTAAGCTGTGACGACTGACGATAGATTGGAGAAAAAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGGAACGGAGAAAAGTGAAGAAAAACTCTCTCTCTTCTGCCAGTGCCGGTAATGAAATTTTCTGGCTTTTAGTTATGATTATTTTCAGCAACTAATGCTCTAGATGCTAATGAACTCTTGTGGTCATCGCAGGTAGCTAACATTTTTACTCTGTATGATGTTTCAAACATCTGGCGTGTTCCTCTGTTATTGCGGGTAAACAGCTTTCTTATACACCAGACGAAAATTTTCACCCTTGCACTGTGCTGAATATCTTCCTCCATCGTTTTAGGACCAAAAGGCAGATCAAGCTATTCTTAAAGTTTTGAATCTTGAAAGGTAAAATTTCCATGTGTCATATATATATGTAAGTTGAAGGTGTCATGCTGCTATACGCAATCCTAAATTCTCCTTTATCTCATTTGCAGCGTTGCCGAAGAGCCTAACTTGGAGGAATGGATGGCAAGGGCTGATCTATATGACACTTTACATGAAACAGTCAGCCTCTTTTTCATCCTTTTTTAAATAACGGATTTTTCATAAATCCGGTCTTTATATTTACGAAAGATATACGCATCCAATATTTTTTATCCTCGTGATGGAAACGAAAAGGATATTTGAGATTACATTAAAAAAGGAAAAATATATACGTTCTATTGTTTTTCTTACTAACACTGATGTGTCATGGTGTGAGTACATCTAGATTTATCTAAATCAAACTATTGAGATCATTGTTAGTAAAAGTTCAGTAAGAAAAATTTAGAAAGACCTAAGCAATCTGTGTACTCTTTTTTCAGGTCAGGATTGCCATGGTTGGAAAATATACCGGTGTATCTGATACATACCTTTCTGTGATGAAGGTGGGATGGATGGATCCCTATGGTGTTTTCTTCCTTCAGTCCATTATAAACCTCATCGGTTTTGTCCAACATATTTTTTGATTTGCAATTCTTGTAGGCTCTTCTACATGCTTGTATAGCTTGTGGCAGAAAACTTCTTGTTGATTGGGTTCCTTCCACCGATCTTGAGGATTCAACTGCCAGTGTGGTTTGAAAAACTTACACTATGCATCATATTTTGCTCTGTAGTATATATATTTGTCTCCTTACATGTTTTTTGTTAAATTTTAATAGGCACCTGATGCTTACAGCACAGCATGGAGTTTACTGAGGGTGAGAAGTTTACTCCTGAAATATTTGCTACATGTAGAATTTTTATTATATATGCTTTATCTGAAATATATTTCATTTCAGGGTGCAGATGGCATTTTAGTACCTGGTGGCTTTGGAGAAAGAGGTGTTGAGGGGAAAATATTGGCTACCAAGCACGCCCGCGAAAACGATGTCCCTTTCCTGGGCATATGCCTTGGCATGCAGCTCGCCGTGGTAGAATTCGCATGCCATGTTTTGAAACTGCCTGATGCGAACAGCACAGAGTTTGATGCCAAAACGGAGAACCCATGTGTAATTATAATGCCAGAGGTAATTAACTGTCAAACCCTCAGTCTATATATATAGATAATAACATTTATATCCACTCGTGAATATAAATATCAGATTTCTATTTATTGTGTAAAAACGTGTATTTGCCTTTAGTTTTTTTTTTAGAAAAATGTGTTGCATTTAGGTGTATGTACTGGTTAGCTATAAACTTAATTTAGGCCATTAGTTACTTGTTTCCTTAAATAAGTAACTTAATTTACTTGCATTTCCTTCAGTGCTCCAACGAAGGAAAGGGTGGTACCATGCGGCGTGGATCAAAGAGGACATTTTTCAAGGTTGCAAATAGCAAGTCTGCCAAGCTGTGAGTGATCATGAACACTTACCCTTACTGTAATTGCATTGTTTCTGTTTTAATTTTCTGTGTTAATTACGTTGCAATCACTCAGATATGGTAGCGTCAACCACATAGATGAGAGGTTTCGGCACAGATACCAGGTTTGTTGTTCAATATCTTTAGTGTAGTTCATCATAATGTTACTCATGGTGTTTTAATTGCTTTTTTACCTTTTTTTTAAAAAAAGAACTGTGATATTGACTAACTTCCCAGGTAAATCCCAATGTGGTGCAATTATTTGAGAACAATGGGCTTCAGGTTGTAGGCACAGACAAGACCGGAGAAATTGTGCAGGTACAAGCTGAAGAACCCAGCTTGCTTGAACAAATTTCAACTTTTCACTTTTCCATTATTCATGCATGCTGATGTTATTGTTTGTCCAATTTTCTAGATCGTCGAAATACCCAATCATCGATTTTTCGTTGGCGTTCAATTTCACCCCGAGTTTATGTCGAGACCTTCGAAACCTTCCGCACTTTTTGTCGGTAAGCTACTTAAACCTCTGTAAACGACCCAAGGGAAGTTGATATATATCTTTCTTTTGAAAAAAAAAACAAGTTAGCGATGTAATATCAACATACCGCTTTCTCGAGTACCGTCAAAATTTCTGTCTTTGACAATCTGATCAACATGTATACCGACCTGCAGGACTAATCGCTGCATCGTGTGGGCAACTGGATGGTGTGCTGCAAGATGCGGCTTGTAACCATGAGCCACAGCAGAATCAGCGTGCAGAGAAGCGTCCTGCTGCTAGTGATCTAGGAGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017538

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017538&oldid=46294"