BGIOSGA017541

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Revision as of 02:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017541| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017541, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017541

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017541, complete gene.

LocusTag

OSJNBA0040E06.5

Ensembl Transcript ID

BGIOSGA017541-TA

Ensembl Protein ID

BGIOSGA017541-PA

Length

3225

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29652186..29655410

Sequence Coding Region

29654995..29655410,29654790..29654912,29653973..29654144,29653437..29653474,29653106..29653304
,29652867..29653019,29652344..29652478,29652186..29652263

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29652186..29655410 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29652186..29655410 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCTCCTCCTCTGCCGCCGCCTGCTTCCTCTCCCCGTCCCCTCCTCCCCCCCCGCGCCACCATTCCATCAAACACCTGGCGTGCGCCGCCTCCAGGTCGCCGTCGCCGGGGCCCTCCTCCTCCCGCTCCCTCGCCCTCCCTTCGCCTTCGGCTTCGGCTTCTCCGTCGCCGTGGCCGCGGCGGCTCCGCGACCTGCTCCCCGACGAGACCGGCCGGATCCTGTCGTCCGCCACGGGCTCCCTCATCGTCGCCCTCGCCTCGGCCGCGCTGATCCTCGGCGACGCCGGCTCCGCCTCCGCGTTCGTCGTCGCCACGCCGCGGAAGCTGCAGGCCGACGAGCTCGCCACCGTGCGCCTCTTCCAGGAGAACACGCCCTCCGTCGTCTACATTACCAACCTCGCCGTGAGGCAGGATGCCTTCACGCTGGACGTGCTCGAGGTGCCGCAGGGGTCCGGGTCGGGGTTCGTCTGGGACAAGAGCGGCCACATAGTCACCAATTTCCATGTCATCCGTGGCGCGTCAGATCTCAGGGTCACACTTGCTGATCAGACAGTGTATGAAGCGCAAGTTGTTGGATTTGACCAGGATAAGGATGTTGCTGTTTTGCGTATTAAAGCACCAACAGATAAATTAAGACCTATACCAGTTGGTGTGTCGGCAGACTTACTGGTCGGTCAGAAAGTATTTGCCATAGGGAACCCGTTTGGTCTTGACCACACTCTTACTACAGGAGTCATCAGTGGATTGCGTAGAGAAATCAGTTCAGCTGCAACAGGACGCCCTATACAGGATGTGATACAAACTGATGCTGCTATCAATCCTGGTAACAGTGGTGGGCCACTTCTTGATAGCTCAGGAAACTTGATAGGTGTAAACACTGCTATATACTCACCTTCAGGAGCATCATCCGGTGTTGGCTTTTCCATTCCAGTTGATACAGTTGGTGGTATTGTGGATCAGCTTATAAAGTTTGGTAAAGTAACAAGACCTATTCTAGGGATAAAATTTGCTCCAGATCAATCTGTAGAGCAGCTTGGATTAAGTGGAGTGCTTGTCTTGGATGCTCCTCCAAATGGACCAGCAGGCAAAGCGGGTCTGCAATCGACCAAGCGGGATTCCTATGGTCGGCTTATCCTAGGGGACATAATTACTTCTGTGAATGGAACAAAGGTAACAAATGGAAGCGACTTGTATAGGATTCTGGATCAGTGTAAAGTTGGAGAGAAGGTGACTGTGGAAGTATTGCGTGGAGATCAAAAGGAGAAGATACCCGTGATTCTTGAACCAAAGCCAGATGAATCATAA</cdnaseq>

Protein Sequence

<aaseq>MAAASSSAAACFLSPSPPPPPRHHSIKHLACAASRSPSPGPSSSRSLALPSPSASASPSPWPRRLRDLLPDETGRILSSATGSLIVALASAALILGDAGSASAFVVATPRKLQADELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKSGHIVTNFHVIRGASDLRVTLADQTVYEAQVVGFDQDKDVAVLRIKAPTDKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGKVTRPILGIKFAPDQSVEQLGLSGVLVLDAPPNGPAGKAGLQSTKRDSYGRLILGDIITSVNGTKVTNGSDLYRILDQCKVGEKVTVEVLRGDQKEKIPVILEPKPDES</aaseq>

Gene Sequence

<dnaseqindica>1..416#499..621#1267..1438#1937..1974#2107..2305#2392..2544#2933..3067#3148..3225#ATGGCCGCCGCCTCCTCCTCTGCCGCCGCCTGCTTCCTCTCCCCGTCCCCTCCTCCCCCCCCGCGCCACCATTCCATCAAACACCTGGCGTGCGCCGCCTCCAGGTCGCCGTCGCCGGGGCCCTCCTCCTCCCGCTCCCTCGCCCTCCCTTCGCCTTCGGCTTCGGCTTCTCCGTCGCCGTGGCCGCGGCGGCTCCGCGACCTGCTCCCCGACGAGACCGGCCGGATCCTGTCGTCCGCCACGGGCTCCCTCATCGTCGCCCTCGCCTCGGCCGCGCTGATCCTCGGCGACGCCGGCTCCGCCTCCGCGTTCGTCGTCGCCACGCCGCGGAAGCTGCAGGCCGACGAGCTCGCCACCGTGCGCCTCTTCCAGGAGAACACGCCCTCCGTCGTCTACATTACCAACCTCGCCGTGAGGTAGAAATCCGCCGCGTTCGTCCTCCTCGGCTTGCCTTTTTTTTTTTTTCACGCGTACTGATGCGAATTCGGGTTGCTATAGGCAGGATGCCTTCACGCTGGACGTGCTCGAGGTGCCGCAGGGGTCCGGGTCGGGGTTCGTCTGGGACAAGAGCGGCCACATAGTCACCAATTTCCATGTCATCCGTGGCGCGTCAGATCTCAGGTTTGTTAAAATGACATGCTGCTGTCGCCCACTTAGAGCTGAATTCGAATCATACTTCACAATTCTGATAGATTTTTTTGGGTGCATGAAGATTTGTATAGGAGTGTAAATTGCTCTAGACTTCTAGAACTTGAAATGGATGGAGTAATGCAAATAGATGTTGGTTAGCTGCAGTAATGTGGTTACAGTGACAACTGACAACGGTTCAGTGAACTGTAAACACTTCCTACTAGTGACTCATTATTCAATGGCTTCCTTTTTCTTAGTTTAATATGTTCAAAGGTGCTATGATATAGATTAGTCATAGTTTCTGACAGGATTGTGTGTTTGAAGCTTTAAAACGATTATATTTTGCATATCATTTTCATTATGTACTTAAATGCTACACTTGAGTATTTGGTGCACAATAATTCATTCCCGAGCCCAACAATAACTTGCGTTTTGGTTTCTTCTAAGCCGCATATACTAGTATGCTGTGTACACTGTTCTGCTAATGCTACATGGTGCCAACTTATTGACAATGCATTATTGCATATAGAGCTAAAACATCCATCCATCTAAGATACTGTTTTGATGAATTCTTATGACATAATAACCTCCAACGGTATCATTGCGAAGTGAAGTTACCACGCTAGTTTTATGCAGGGTCACACTTGCTGATCAGACAGTGTATGAAGCGCAAGTTGTTGGATTTGACCAGGATAAGGATGTTGCTGTTTTGCGTATTAAAGCACCAACAGATAAATTAAGACCTATACCAGTTGGTGTGTCGGCAGACTTACTGGTCGGTCAGAAAGTATTTGCCATAGGGAACCCGGTGAGTGTTTCTTACACCAACTGTTCGGTGTATTACCCATTCATGACAACTGGCTCATAAGCTTAATAAAATGTATTCTAACATAGTCTCAAAAAAACACTATCCAGTTCTTTACTTGTGATGTGCACCCCTGAATAATTTATTTCCATAGTTTCAATGTACTTTTCTGTTCAGAGCTGAAACAACCTTAGAAATCCCCCTAGCTGTTCATGAATATGTCTGACATTGTAATGAAAATACAATATATGCTAGAGAATATTGTACACAAAAAAATACAATTAATCACTATGCAAACAACCAATATATCAAAATGATCTTATGCCACTAAGACTATGTATCGCGTGTTTTGGTGATATCTTTAGGCTTTTAGCACGTATTGATTCCTGGATAGAAAAATATGCTTACAACACTTGATTATTCTGAGTTATTTTCTATCATGCTTGCATTAACTTACTGATCACTAACAGTCTGTAACATGTTATGTCTATGTTTATGCAGTTTGGTCTTGACCACACTCTTACTACAGGAGTCATCAGGTGTAATGTTGTTTGAGTAAACAGATTCTGTCTTTTGCTGATTCATAATGCAATACATGTCTTTTGCTGATTCATAATGCAATACACTGAGACACCTCTGTTTTGTTTTTCTGTTGACCCCCTTCCCTGCAGTGGATTGCGTAGAGAAATCAGTTCAGCTGCAACAGGACGCCCTATACAGGATGTGATACAAACTGATGCTGCTATCAATCCTGGTAACAGTGGTGGGCCACTTCTTGATAGCTCAGGAAACTTGATAGGTGTAAACACTGCTATATACTCACCTTCAGGAGCATCATCCGGTGTTGGCTTTTCCATTCCAGTTGATACAGTATGCAACTTGACATAAATACAAAACTCAGAGTTTCAGAATTTTTTATTTTCTATTCTATTAACATCTCTTTTGAACACATCCAGGTTGGTGGTATTGTGGATCAGCTTATAAAGTTTGGTAAAGTAACAAGACCTATTCTAGGGATAAAATTTGCTCCAGATCAATCTGTAGAGCAGCTTGGATTAAGTGGAGTGCTTGTCTTGGATGCTCCTCCAAATGGACCAGCAGGCAAAGCGGTATTGTCCATAGATCTTATTTATTGGTTTCCTGTAAATTGCAGTCAGTCTTAAAAGCACTGGTTTTCTTGCACTAGGCATGTTCCAATTACGTGTCAATTTGAGTTTACTGGGAGAACACCTGAGTTATTACTCCATAACATCATATGCTATGTTGATTGATGTCCTCTCGTGTGTTTTCAATCGTCACTAGGACTAAGGACAGCTGAACAGACATAACAGTGATAATTCATTTAGCATAAAGGCTAACCTTATGTGATTGATAGAACAAATCCTTTTTATTGCAGACACTGTATTTTCTTTGAACATGTTCGTGTAATAGAAGACTAGCTGCTTGCTTTGAAAATGACTGGTGCAACTAAAACTTATACATCTTGTTGTATGCTAGGGTCTGCAATCGACCAAGCGGGATTCCTATGGTCGGCTTATCCTAGGGGACATAATTACTTCTGTGAATGGAACAAAGGTAACAAATGGAAGCGACTTGTATAGGATTCTGGATCAGTGTAAAGTTGGAGAGAAGGTAAGCTTTCACACGTTTTTGTAAGGAAGAAATTGCTGTGATTGATAATAGCTCAGGTACTTATGCATATTGTGTTATAGGTGACTGTGGAAGTATTGCGTGGAGATCAAAAGGAGAAGATACCCGTGATTCTTGAACCAAAGCCAGATGAATCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017541

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017541&oldid=46297"