Os09g0352000

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0352000| Description = Protein kinase-like domain containing protein| Version = NM_001069492.1 GI:115478726 GeneID:4346823| Length = 5453 b...")
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Gene Name

Os09g0352000

Description

Protein kinase-like domain containing protein

Version

NM_001069492.1 GI:115478726 GeneID:4346823

Length

5453 bp

Definition

Oryza sativa Japonica Group Os09g0352000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11773711..11779163

Sequence Coding Region

11773711..11774104,11774218..11774410,11774491..11774559,11775650..11775776,11775924..11776177
,11776287..11776441,11776591..11776665,11777059..11777130,11777224..11777359
,11777454..11777929,11778556..11779163

Expression

GEO Profiles:Os09g0352000

Genome Context

<gbrowseImage1> name=NC_008402:11773711..11779163 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11773711..11779163 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccatttttcattcctccatccgtttgcgcattaggtttcctaagcatcgattgcggtctggaaggagacgacagctacccggatgaccagaccggcattacttatgtccctgatggtccatatgtcgactctggggagaaccacagggtaaccaccgtgtacaggaactactggggccaggactaccgtactctcaagacgctcaggagcttcccttccgcttctggtaagcggaactgctacagcctccctaccaacgtcggggacaagtaccttgtcaggctggaattcttatatggcaactacgacagcatggacagctctttgcttaaattcaacttatctcttggggtgaaccactggaacaccgtgaatttggacaccaccgacgaccaagatggttataacttttatgaggcggtgttcgtggcatgggcgagctgggcgccggtgtgcctcatcaacattggccaaggcataccatttgtgtccacagtagagctgaggctgctcggcactttgccctacccggctatcatcggcaatcagtcactctccctctatgtcagaaggagcataggatcgagcgctgacgatgatatgaggtatcctgatgatcagtatgatcggtactggatcatgggagaaacaacaggagctgccgacatgtccaacatttccaccccgacgatcatcccgccgagcgtcccttttgcagtgccctcgcctatactccagaaggcagttgtgccagctgacaactcaatgaaactagttttccactcagaccaattagatgcacagctccgtgaccaccttgtgatcctacacttcgccgacttccagaataacaagtcccgggaattcactgtttcaattgacagtggtgtacagagcggcccattcagtccaccatacctgaaagttttgtccatcaccacagattggtccagcgataccgaaggcaagtataacttcacactcacggccacatcaacgtcttccctgcccccgatcctcaatgcttacgaggtctacggtcgcatcatccatgacaatccaatgacattctcccaagattttgatgcgatcatggctattaaatatgagtatggaataaggaagaactggatgggtgatccgtgtttcccacctgaatttgcttgggatggtgttgaatgtagcagtgacggaaaaactatgaggataatatctctcgatctctccaacagcgaactgcacgggttaatatccaataatttcacattgcttactgccctcaagtatttaaacctgtcatgcaatcaactgaatggagcaattccagactccctccgtagaaagaatggatcaatggttctaagttatgagtctggtggagatatgtgcaaaaaaccagtaagtccgtcgtcaagaaacagagcagctgccttagctgtttcagtagtggttccaatgctggcagtggccatacttggtctggcatatttattctggagagccaaaagaaagcacaataatgatcctcccacggtactagaactcacgggtgctccaggacataagacaaatcattgggaccgtctacaaaaacctgaaaatcgtcgattcacatttgaggagctacagaagttcactgataacttcaaacgtttaattgggcatggaggctttgggcatgtgtattatggttctctagaagacagtactgaggttgcagtcaagatgcgatctgaatcatcattgcatgggcttgatgagttcttagctgaggttcagagcttgaccacggtgcatcatagaaatcttgtctctttgtttggttactgctgggacgacgatcacttagcgcttgtctatgagtacatgtctagtggcaatctttgtgattatctgagaggtaaaaccagtatgaccgaaacgtttaattgggcaacacgtgtaaaaattgcgttagaagctgcacaaggcctggattatctacacaagggttgcaacttgccaataattcatggggatgtgaagacaaataacattctcttgggtcgaaatctaaaagccaaaatagcagattttgggctttctaaaacctatcatagcgactctcaaactcacatatcagctagtattgcagctggatctatgggttatattgaccctgagtactacaccaccggcaggctcactgagagcagtgatgtctatagcttcggtgttgttttactggaggtaactaccggtgaacctcccataatacctggaaatggacacgttgttcagcgtgtgaagcagaagattgtcacaggtaacatcagctctattgttgatacacgtcttggaggttcctataatgttagctccatgtggaaggttctagatgctgccatgatgtgcacaacaaatattgctgctgaaaggccaacaatggctacagtggttatgcaactgaaggaaagtctagaattagaggaagctcatggtgaaaggggtgatatggaaaaccaagcaagggataacacatatttgatgtccacatttggtccattggcaagataa</cdnaseq>

Protein Sequence

<aaseq>MPFFIPPSVCALGFLSIDCGLEGDDSYPDDQTGITYVPDGPYVD SGENHRVTTVYRNYWGQDYRTLKTLRSFPSASGKRNCYSLPTNVGDKYLVRLEFLYGN YDSMDSSLLKFNLSLGVNHWNTVNLDTTDDQDGYNFYEAVFVAWASWAPVCLINIGQG IPFVSTVELRLLGTLPYPAIIGNQSLSLYVRRSIGSSADDDMRYPDDQYDRYWIMGET TGAADMSNISTPTIIPPSVPFAVPSPILQKAVVPADNSMKLVFHSDQLDAQLRDHLVI LHFADFQNNKSREFTVSIDSGVQSGPFSPPYLKVLSITTDWSSDTEGKYNFTLTATST SSLPPILNAYEVYGRIIHDNPMTFSQDFDAIMAIKYEYGIRKNWMGDPCFPPEFAWDG VECSSDGKTMRIISLDLSNSELHGLISNNFTLLTALKYLNLSCNQLNGAIPDSLRRKN GSMVLSYESGGDMCKKPVSPSSRNRAAALAVSVVVPMLAVAILGLAYLFWRAKRKHNN DPPTVLELTGAPGHKTNHWDRLQKPENRRFTFEELQKFTDNFKRLIGHGGFGHVYYGS LEDSTEVAVKMRSESSLHGLDEFLAEVQSLTTVHHRNLVSLFGYCWDDDHLALVYEYM SSGNLCDYLRGKTSMTETFNWATRVKIALEAAQGLDYLHKGCNLPIIHGDVKTNNILL GRNLKAKIADFGLSKTYHSDSQTHISASIAAGSMGYIDPEYYTTGRLTESSDVYSFGV VLLEVTTGEPPIIPGNGHVVQRVKQKIVTGNISSIVDTRLGGSYNVSSMWKVLDAAMM CTTNIAAERPTMATVVMQLKESLELEEAHGERGDMENQARDNTYLMSTFGPLAR</aaseq>

Gene Sequence

<dnaseqindica>5060..5453#4754..4946#4605..4673#3388..3514#2987..3240#2723..2877#2499..2573#2034..2105#1805..1940#1235..1710#1..608#atgccatttttcattcctccatccgtttgcgcattaggtttcctaagcatcgattgcggtctggaaggagacgacagctacccggatgaccagaccggcattacttatgtccctgatggtccatatgtcgactctggggagaaccacagggtaaccaccgtgtacaggaactactggggccaggactaccgtactctcaagacgctcaggagcttcccttccgcttctggtaagcggaactgctacagcctccctaccaacgtcggggacaagtaccttgtcaggctggaattcttatatggcaactacgacagcatggacagctctttgcttaaattcaacttatctcttggggtgaaccactggaacaccgtgaatttggacaccaccgacgaccaagatggttataacttttatgaggcggtgttcgtggcatgggcgagctgggcgccggtgtgcctcatcaacattggccaaggcataccatttgtgtccacagtagagctgaggctgctcggcactttgccctacccggctatcatcggcaatcagtcactctccctctatgtcagaaggagcataggatcgagcgctgacgatgatatgaggtacaaatgttctttccatggttgtagcataaagagcatattagtggcgcatatgcggacctatacaacaatggtagttttccttactcgtaattttctaaaccaacctaaatttttctcactcctaattttgctagtattcatcatagtcaacttgttttaaaattgtctaatgagaaaaactatatatatgtttttttttcttacaaagtcttacaaaaggtgatgtggcccaccataattgaatcttgatgttctatactctcaactaaataaatcattaaattattgccaatttggtgaaaaatttgaaatctgatttgagcttgcatttaattaggctcaaggagaattatagatctttagtgcaatcatggattgatcaattgtaactgttttagagcgtagttcttttctgccctttgtttcttagtatatacactcttttccatttatataaaatttatataccgtggaggccttccccactgtttcttggtaaaaaaaaattaaagcattaaatcaaacgggtgagaactttgtttggaagagttctataagaatttttcttaagtacatatatatagcactgctcttgtgtaatccttgtacattcgggatcataggtatcctgatgatcagtatgatcggtactggatcatgggagaaacaacaggagctgccgacatgtccaacatttccaccccgacgatcatcccgccgagcgtcccttttgcagtgccctcgcctatactccagaaggcagttgtgccagctgacaactcaatgaaactagttttccactcagaccaattagatgcacagctccgtgaccaccttgtgatcctacacttcgccgacttccagaataacaagtcccgggaattcactgtttcaattgacagtggtgtacagagcggcccattcagtccaccatacctgaaagttttgtccatcaccacagattggtccagcgataccgaaggcaagtataacttcacactcacggccacatcaacgtcttccctgcccccgatcctcaatgcttacgaggtctacggtcgcatcatccatgacaatccaatgacattctcccaagattgtaagctctctatctttgtctagcaacgtacactaaataacactgtcaactatctctcttgaatttcttaattatatttctattcatatgttagttgatgcgatcatggctattaaatatgagtatggaataaggaagaactggatgggtgatccgtgtttcccacctgaatttgcttgggatggtgttgaatgtagcagtgacggaaaaactatgaggataatatctctgtaagtattattgtgaaaatatacattcactaccatcattttatacatttggtaccatttcttgacatttgattacttaaaactataatgcagcgatctctccaacagcgaactgcacgggttaatatccaataatttcacattgcttactgccctcaagtatttgtaagtatattttccactgccttagatttgccacatctgaaattctcagttggcatgagtggggatcattatctgctagtgttaaatatgactgaaaaacaccaactataaatggtgactggatgcagttttacggtcgtaaaatggtataaaacgaaaacatgcttgttatattttactgcagctttatcacttaataatatcatcctttgtggcaaaaacgtagctttgaaatatacctgacaataattaaagaggtttggtacttaatatacctagtactctaccatgcttttacccttgtctaaatcttttagtggataggtttgttttcacattgttatcaagctagggacattgcttaatacctaaactgcatatcgctctgtacagaaacctgtcatgcaatcaactgaatggagcaattccagactccctccgtagaaagaatggatcaatggttctaaggtttggctatttttatattgatgttagatttactaattagcattatccggattgtggaatgttactctttatctaaaatttagggacgttaacaccaaacaatttcttttaaccaatttaaaattttaaactttggactgcaatttcagttatgagtctggtggagatatgtgcaaaaaaccagtaagtccgtcgtcaagaaacagagcagctgccttagctgtttcagtagtggttccaatgctggcagtggccatacttggtctggcatatttattctggagagccaaaagaaagcacaatagtgcgtaccctctgctattgtaatcttgaaaaaatattgttgcatggtttaccaactgcatttagtatttgctaatatatatctgttctttctgcacctgtttctacagatgatcctcccacggtactagaactcacgggtgctccaggacataagacaaatcattgggaccgtctacaaaaacctgaaaatcgtcgattcacatttgaggagctacagaagttcactgataacttcaaacgtttaattgggcatggaggctttgggcatgtgtattatggttctctagaagacagtactgaggttgcagtcaagatgcgatctgaatcatcattgcatgggcttgatgagttcttagctgaggtaccaacgacagatactattaagtttagcacagttataatctataggttccatatatggtatacacatttgaatataaacagtctcatccactgtgagatttcatacacactgagatttaatcttttgttttatcccgttacataggttcagagcttgaccacggtgcatcatagaaatcttgtctctttgtttggttactgctgggacgacgatcacttagcgcttgtctatgagtacatgtctagtggcaatctttgtgattatctgagaggttcgtccattacaaactttaaccattgaatgttgggaagtttttgggaggatactgggcacacgtgatgacctacacatagtgcaaaccaactagttggctattcatctttccttcttagaactatacactgccaaagcagctcgtgttgattctacgtgattctaggctaatgactcacttatgttaaacgacagtttgcggaaatactactattataagtactacttgcctggagagacgaccatagtttagattgttttaaataaaaaagagactcatggttcatagcaagccctcataaccaattcaccctaacactatgtctagtgactcatgtttctagtggtgacatgctattactctctactaaggaccttcatggccataaagataccataaaggattaagtgttgttttatattggtaccaaattctgccctatcaatcctttggttgtttagacagtagttcgattactttggattcagacgaactattggcaatctgacactattttggtaactttccaggtacgaatccaattcaacactgaattggtagtacactaagcatgattgttgcaaatttaccctaccaatagttttagtacttagggtagaaaacaaaacctatccttaattctgtctcttttgatgaagtatcttgatcttgtattttgtaaccttttgtcgtaattttaattgaaggaaaatttgtcatagttattcttgtttcattctcaacacaacacaatcacaatcacaacacaacacaacacaatcataataaataactgttttgcaatatattgaacctgaaaggccatcttgactgattttgaagacatgctactatgtgatatagaaactatttagttgaaacatacttctccttgctagtgcttgaaaacaaagtaatgccaagtcatgatttgcatctctctaagaaatcatcagattggttattatgttttgttaaaaagggataaatactatatgagtatagaaaaatgttgtacaacaacattaattgtggtatgaagttattcgtagagttctcttctaattgtatgtgtgcatgtatgaaggtaaaaccagtatgaccgaaacgtttaattgggcaacacgtgtaaaaattgcgttagaagctgcacaaggtatgctactataggaatacagacaaaattaaaaaattatattgtaatccttcttcttagtatggttttcttatgtgtaggcctggattatctacacaagggttgcaacttgccaataattcatggggatgtgaagacaaataacattctcttgggtcgaaatctaaaagccaaaatagcagattttgggctttctaaaacctatcatagcgactctcaaactcacatatcagctagtattgcagctggatctatgggttatattgaccctgagtatgagtctctatgtgcacactattacttttgtgctatctattcatatatatgattgttttataatattcaacttattcactctttgcaatcattatgttggccatttgtaggtactacaccaccggcaggctcactgagagcagtgatgtctatagcttcggtgttgttttactggaggtaactaccggtgaacctcccataatacctggaaatggacacgttgttcagcgtgtgaagcagaagattgtcacaggtaacatcagctctattgttgatacacgtcttggaggttcctataatgttagctccatgtggaaggttctagatgctgccatgatgtgcacaacaaatattgctgctgaaaggccaacaatggctacagtggttatgcaactgaaggaaagtctagaattagaggaagctcatggtgaaaggggtgatatggaaaaccaagcaagggataacacatatttgatgtccacatttggtccattggcaagataa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0352000, RefSeq:Os09g0352000