BGIOSGA017546

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Revision as of 02:20, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017546| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017546, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017546

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017546, complete gene.

LocusTag

OS05G0567300

Ensembl Transcript ID

BGIOSGA017546-TA

Ensembl Protein ID

BGIOSGA017546-PA

Length

2369

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29576984..29579352

Sequence Coding Region

29578977..29579352,29578683..29578828,29578444..29578584,29578238..29578351,29578026..29578151
,29577667..29577765,29577479..29577580,29577173..29577253,29576984..29577070

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29576984..29579352 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29576984..29579352 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTAGGCCTCGCGCTGCGGCTCGTCGCGCCGCCGCCTCGTCTCCCCTGTAGAGCTCTCCAGCCGCCGCCGATGCCTTGTTTCTCTCCGTGTGCGGCCCGAAGAAGCCGCATCCGCTCCTCGAGGTTGGAGCGCAGGGTTGGGGTTGTTGTATCCGGTGGGAGTATGGCTTCCTTGGCAATGCAGGAGGAGGAAGAGGAAGAGTGGGAAGAAGCGGAGGAAGAAGCGGAAGGATGGCAAGAGGAGGAGGCTGCAGTGGTGACGACGAGGCCGCGTCTGGAGCTCATCGAGAAGCCGGACCGGAGCCTGTGTCTGCTCGACGAGTACGAGTCGGAGGAGCTAGGCACCTCTCATTGTGCCAACCACCGCAGCGGTTATGTTGCTGTATTAGGAAAGCCAAATGTTGGAAAGAGCACCCTAATTAACCAAATTGTTGGTCAGAAACTTTCAATTGTGACAGACAAACCGCAAACCACACGGCATCGCATTCTTGGTATATGTTCTGAACCAGAATACCAGATAATACTTTATGACACGCCAGGTGTCATCAAAAAGGAAATGCATAAGCTAGACACAATGATGATGAAGAATGTTAGGAGTGCCGTTGGCAGTGCAGATTGTGTGCTTGTTGTTGTTGATGCTTGCAAAATGCCTGAAAAGATTGATGAAATACTGGAAGAAGGTGTGGGGAACAAAGATACTGAGCTTCCAGTACTGTTGGTATTAAACAAGAAAGATCTCATAAAGCCAGGAGAAATTGCAAAGAAACTTGAGTGGTATCAAAAATTCACTAATGCTGATGACGTCATACCTATAAGTGCTAAATTTGGGCATGGAGTGGATGATATCAAGGAGTGGATATTATCAAAGCTCCCTCTGGGGCCTGCTTACTATCCAAAGGACATAGCTAGTGAGCACCCTGAGAGATTTTTTGTGGGGGAAATAGTGAGAGAAAAGATTTTTCTTCAGTATCGTCAAGAAATTCCATATGCTTGTCAGGTTAATGTCATAAGTTACAAGAGCAGACCTACAGCCAAGGATTTTATTCAAGTTGAGATACTCGTTGAGAAGGAATCACAAAGAAGCATTATACTTGGGAAGGATGGAAAAGCAATCAAGATGCTAGCAACAGCATCAAGACTTGATATCGAGGATTTCCTACAAAAGAAGGTCTATCTTGAGATAATGGTCAAGGTGAAGGAAAACTGGCGGCAGGATGAACTTCTTTTGAAGCGTTATGGCTATGGAGGGGAGATTCAAGCACTATGA</cdnaseq>

Protein Sequence

<aaseq>MELGLALRLVAPPPRLPCRALQPPPMPCFSPCAARRSRIRSSRLERRVGVVVSGGSMASLAMQEEEEEEWEEAEEEAEGWQEEEAAVVTTRPRLELIEKPDRSLCLLDEYESEELGTSHCANHRSGYVAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQIILYDTPGVIKKEMHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGVGNKDTELPVLLVLNKKDLIKPGEIAKKLEWYQKFTNADDVIPISAKFGHGVDDIKEWILSKLPLGPAYYPKDIASEHPERFFVGEIVREKIFLQYRQEIPYACQVNVISYKSRPTAKDFIQVEILVEKESQRSIILGKDGKAIKMLATASRLDIEDFLQKKVYLEIMVKVKENWRQDELLLKRYGYGGEIQAL</aaseq>

Gene Sequence

<dnaseqindica>1..376#525..670#769..909#1002..1115#1202..1327#1588..1686#1773..1874#2100..2180#2283..2369#ATGGAGCTAGGCCTCGCGCTGCGGCTCGTCGCGCCGCCGCCTCGTCTCCCCTGTAGAGCTCTCCAGCCGCCGCCGATGCCTTGTTTCTCTCCGTGTGCGGCCCGAAGAAGCCGCATCCGCTCCTCGAGGTTGGAGCGCAGGGTTGGGGTTGTTGTATCCGGTGGGAGTATGGCTTCCTTGGCAATGCAGGAGGAGGAAGAGGAAGAGTGGGAAGAAGCGGAGGAAGAAGCGGAAGGATGGCAAGAGGAGGAGGCTGCAGTGGTGACGACGAGGCCGCGTCTGGAGCTCATCGAGAAGCCGGACCGGAGCCTGTGTCTGCTCGACGAGTACGAGTCGGAGGAGCTAGGCACCTCTCATTGTGCCAACCACCGCAGCGGTGAGGCTTCTAGCTTCTGTGAAATTCACCTCTTCATTTCGATTCTGAAATAACAGCCTTTTTAGTTTATGATCTCCAAATGAAACTATTCTGCAGATGAATATTTTTTCATGTTGTTGTAATATTGATATACCATGTGTTTGCACAGGTTATGTTGCTGTATTAGGAAAGCCAAATGTTGGAAAGAGCACCCTAATTAACCAAATTGTTGGTCAGAAACTTTCAATTGTGACAGACAAACCGCAAACCACACGGCATCGCATTCTTGGTATATGTTCTGAACCAGAATACCAGGTATCACCTTTTAGTTTCTAAAGCTTTAGGATTATAGACTATGAAAGGGGGAAATGTTAATTTCTCACTGCTAATCTGAGTTATCATTTAGTTTGCAGATAATACTTTATGACACGCCAGGTGTCATCAAAAAGGAAATGCATAAGCTAGACACAATGATGATGAAGAATGTTAGGAGTGCCGTTGGCAGTGCAGATTGTGTGCTTGTTGTTGTTGATGCTTGCAAAATGCCTGAAAAGGTATTGCAACATAGGAAAGAGATGACTGAATTATGAAAAAAAAATTATTATGCCAATATACAATCTAAAATTCTGACATTTGTACCTTTTAGATTGATGAAATACTGGAAGAAGGTGTGGGGAACAAAGATACTGAGCTTCCAGTACTGTTGGTATTAAACAAGAAAGATCTCATAAAGCCAGGAGAAATTGCAAAGAAACTTGAGGTAAAATATCGTTACAAAAATTTGGAGATGGTTTTGTTTTTCCCTCTACTTCGATGTAATTGATTTACTGGCTACTATTTTCACAGTGGTATCAAAAATTCACTAATGCTGATGACGTCATACCTATAAGTGCTAAATTTGGGCATGGAGTGGATGATATCAAGGAGTGGATATTATCAAAGCTCCCTCTGGGGCCTGCTTACTATCCAAAGGTATTGGTGTATAAGATGAATTTTTTTTTCTTATTCTATTTCTGCAAGTGTTTCTTCATCTTTGGCACAAATTTTTCTGTACTCATGTAAAACCAGATAGCCATAGTGTGACTATAATATGTCTTTTCCATAGCATCATGTTTGTTCTTTAGATAGTGCTACTCACGATATCCAGTGCTTGCTTTGATGTTTAACTGCAGCCAATAAATACTGATACTACAAGATATCAAATATATTTGTTCATGTGATTCTCGTTCCAGGACATAGCTAGTGAGCACCCTGAGAGATTTTTTGTGGGGGAAATAGTGAGAGAAAAGATTTTTCTTCAGTATCGTCAAGAAATTCCATATGCTTGTCAGGTATATCTTCTGGTGCTTGCACCTATCAATTTTGTGCGGCATTTTTCTGCCAGCATGTGTCAGATGTGCGACTTTGTTTATGACAGGTTAATGTCATAAGTTACAAGAGCAGACCTACAGCCAAGGATTTTATTCAAGTTGAGATACTCGTTGAGAAGGAATCACAAAGAAGCATTATACTTGGGAAGGTAAAAAAAATAGTAAAACAGTACCTTTGTGCGCCTGAATATTTCAGGATTTTATGGTTACGAAATCAGTTAAGTTTAATCTTTTTCAAGTTAACATTGAGTATAGCTAAGGAAAATACCATAACTTGGGATGCATATTTGGGTAGAATGAAGCAGTTTCATGAAATCATCTTATTTGCATTGCTTTAGTGGGATATATTTTTGTAACATGTTTGGCAACTGCAGGATGGAAAAGCAATCAAGATGCTAGCAACAGCATCAAGACTTGATATCGAGGATTTCCTACAAAAGAAGGTCTATCTTGAGGTAGTAACTGCTTCCTTTGTTTGGAGGCTGTGAAATTTTGATCTACCTTGAGGATTTGTTCTGAGCAGTTTCCTAATATCAAATATACTATATATTGGACAGATAATGGTCAAGGTGAAGGAAAACTGGCGGCAGGATGAACTTCTTTTGAAGCGTTATGGCTATGGAGGGGAGATTCAAGCACTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017546