BGIOSGA017560

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Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017560| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017560, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017560

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017560, complete gene.

LocusTag

OS05G0564050

Ensembl Transcript ID

BGIOSGA017560-TA

Ensembl Protein ID

BGIOSGA017560-PA

Length

3315

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29374436..29377750

Sequence Coding Region

29377414..29377750,29376849..29376958,29376345..29376449,29374436..29375164

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29374436..29377750 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29374436..29377750 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCCAAGGCGGCGGCGAAGGCGAAGCGCTCGCACACGGTGCGGGGGCGGCGCGCCCACCAGACTCCCGCCGCCGCCGCCGCTCACAGGCAGAAGCGCGCGGAAGCCGCCGCCGCCGCCGCCGCCTCCGCCTCCGGCCCCCGCGGCCGCAACCTCCCGTCGAACTGGGACCGCTACGACGGCGAGGACGATGCCGATGAATCCGCGGCCCCCTCGGAGTGGACCGGCGAGGTGGCGCCGCGCAGCAAGGGCGCAGACTTCGGCTTCCTGCTCGAGCAGGCTCGGGCTCAGCCCCGCGAGGCGCAGCGTCTCTCCTCCCAGGATTCGCCATTCGATTTTATGCAGGCTTCAACCTCTATGCTTGAAGCTAAAGGGGAAGAGATTTTGTCCTGGTGTGAAGATGACAACTTCATCTTAGAAGATGATTTAGCACCCGATTTCGAGGTACCTTTTCTCTCCATGGATCTGCATGCATTGGCCACCCATCTTTCGAAGCTTAAGCTTTCTGAGAGGCTTTTCTTAGAGAAAGATCTGCTACCTGAGGATCTGGCTGTTGCATCTGAGGTCAATCAAATACAGATTCAAAGAGGCACAGATGTGGATAGTGATGCTAAAGGCAGCTTGATTCATGACCATGACAGCATTCGTTGTGATGATCAAATGAAAGCAGATTGTCAGTTGAAATGTTTTGAAGAAGATAAATCCACATCATCACCCAAGACTAGTTCTCACTCTGTGCATTTGGACACTGGAGAAGATAATAACAATAGTGAAGGGGCAAAGTTTGAGGTGGTTGCTGCAGAAGAACTTGATATGCTTCTTAATACGCTTGGTGGAACTCATCTTTCTGGCTCCAATTTAGATGAATCATTTGGAAACAAATCAACATTGCAAGATGTGAAAGTCAATCAACCAGATAAGAAAGTTACACCTAGCACTTCATCCAAATCATCGGTGACTGCTGCTTGTGACGATGCTCTAGATGACTTGCTTTCAGAGACTTCTCCTTCTGTCCAGAATGAAGGTTTTGCTGAACCAGGCTCAACTTCCAAGAATGACCACAATATTGACATCAGATATGCTAACCAGATAGATATATCTACATCTATTGATGATTTGGTGGATGACTTGCTCACTGACACTTCACTGTGCTTGAATGGACAGAAACAAACTACATCTGCTAAGGGCAAAGACAACATCTCAAGTGTCAGTGTTCCTCCTAATTCCGGACCCTCAAATGCGTCGGACGATTTTGATTCATGGTTTGATTCTCTCTAG</cdnaseq>

Protein Sequence

<aaseq>MDPKAAAKAKRSHTVRGRRAHQTPAAAAAHRQKRAEAAAAAAASASGPRGRNLPSNWDRYDGEDDADESAAPSEWTGEVAPRSKGADFGFLLEQARAQPREAQRLSSQDSPFDFMQASTSMLEAKGEEILSWCEDDNFILEDDLAPDFEVPFLSMDLHALATHLSKLKLSERLFLEKDLLPEDLAVASEVNQIQIQRGTDVDSDAKGSLIHDHDSIRCDDQMKADCQLKCFEEDKSTSSPKTSSHSVHLDTGEDNNNSEGAKFEVVAAEELDMLLNTLGGTHLSGSNLDESFGNKSTLQDVKVNQPDKKVTPSTSSKSSVTAACDDALDDLLSETSPSVQNEGFAEPGSTSKNDHNIDIRYANQIDISTSIDDLVDDLLTDTSLCLNGQKQTTSAKGKDNISSVSVPPNSGPSNASDDFDSWFDSL</aaseq>

Gene Sequence

<dnaseqindica>1..337#793..902#1302..1406#2587..3315#ATGGATCCCAAGGCGGCGGCGAAGGCGAAGCGCTCGCACACGGTGCGGGGGCGGCGCGCCCACCAGACTCCCGCCGCCGCCGCCGCTCACAGGCAGAAGCGCGCGGAAGCCGCCGCCGCCGCCGCCGCCTCCGCCTCCGGCCCCCGCGGCCGCAACCTCCCGTCGAACTGGGACCGCTACGACGGCGAGGACGATGCCGATGAATCCGCGGCCCCCTCGGAGTGGACCGGCGAGGTGGCGCCGCGCAGCAAGGGCGCAGACTTCGGCTTCCTGCTCGAGCAGGCTCGGGCTCAGCCCCGCGAGGCGCAGCGTCTCTCCTCCCAGGATTCGCCATTCGGTGAGTGACCCTACCTCCACTACCTCATTGACAAAGCTCATCGGGAGAATCGCTTCAAGCATGAACTGCGATCCTTGCTTACCATTACATAGACACGATCACACGAAACGAGGGCACTAGCTAAACTGAGAAATATTTTGTTCTTAGTCATATTAAACCTCACTTAAGAAGCCAGTTGAGCATACCAAACATCATGAGGTACTCCTTTGTTTATAGAATTTGAGTTGAGCATACATCTCGTAGGCCGCTAGGTAGTTCAAACGGAGTTTCTGCTGTGTCAGTTAGTATATAACCACAACTTACATTTTGGTTTGAGAGTTTTGGAAAATTGATGTCTGTAATCGGTTATTTTGATGATGATCATGTGATGTGTCCTTTGGGAAGTGGGCCTACTATTTGTGATTGCTTTCTCCACTGTTGCTAAGTTTGTTAATTTTATTTTTCTTTTTTTTTAGATTTTATGCAGGCTTCAACCTCTATGCTTGAAGCTAAAGGGGAAGAGATTTTGTCCTGGTGTGAAGATGACAACTTCATCTTAGAAGATGATTTAGCACCCGATTTCGAGGTAAAATTTGGTGCTGTGATATTACGTTTGTTACTTGTCTTGTGCTGCCACATCAAGTAAACTATTGTAATGTTTGGTCTTAGTGAGACGAATGACATGTACATGGTTAAAATGTTTTGTTTGAGCATGGTTGGGGCTATGACTGAAACCTCTCTTTGTTTCTTGCATTGAGACTATTGTCAGTTTACAGAGTGAAATTTGTCTGGATAGCTTGATGATAGTAGTCCGAACAGACAGGGATGTGGAATTTAGACTTTATTTTGATTTGTAGACCCTCATGTAGTTTTGATTATGTACCTTACAATTTGTGTATCAACTCTTAAAACCTTGTGAATTTGGGCAGCTTCATATCACATTTTTAGATATTTATGTGAGAATTTGTTTCCCCTCAACTTTTAGGTACCTTTTCTCTCCATGGATCTGCATGCATTGGCCACCCATCTTTCGAAGCTTAAGCTTTCTGAGAGGCTTTTCTTAGAGAAAGATCTGCTACCTGAGGATCTGGTACGTCTGTTTATAGCAATTTTCTTTAGTTTTGCTAATTTTCCAAGTACTCAAATGTATTTGATCATGTGCTACATTGTCTACTTTTAGTAAACTGTAACTGTAGTTTTGCTTTTCCGTGAGAAATTGTATATACCCTTGTTTTGTTTTTTCTAAAGTTCAATTTAAAAAATCGTTATGAACAAATGGTCCTTTACACTATGTTCAAGTAGGGGTTTAACTTACTTCATGCAAACATTATTCTTGAAGTGTCTACGGGTCTATGGCGACACCCAATCTGTATACAATGAAAATGTGCAATGTTCCTTATTCTGATTTCCATGTGATAAAGCAAACCCTTAAAAGGACAATTTGGGCTGGTACCCTTATGGTTGATCTGTAGTAGTCATCATCACCTAGGTGCCTACCCTTTTGACCTCCACTTGCTACAAGTTAATCTCTGCTGTTAATGCCTGTAGCTCATATGCCTTGCCATGGCAGGTCTGCCTGCAATGCAGCCTTTCAATGCTCTGGTTGATATTTGCTGCTGGTATTATTGATATCCATCTGCCTATTGGCCATTCCTCTAGGCACTCTATTTTGTGCATTAACCACACTATGGTTTGATATCTACCTTTCATATTTCACTAATGCACCTTTTGCCAGTGGCCCATCATGGTAACTGTCTGCACTACGATCTCTTAGTTCTGCCATCAGCCACATAGCTTATTTTTAGCTTCCAAACTTTCTGAGTGGTGGAAGGATTATTTTTTGTACAGTACAATAGCCATCTGCATAGGATTAGATAGAGTAATGAATTTCACTGGGTATTTAAACCCTAGTAAACTATGTCTATTTTACCTATTGTACTGGGACGATTGGAATTATTTTTAGATAATGGACTGAAATCTGGCCTCTATACCCACATGTAGATATACACAGCCAACTGGGATGATTTAGTGCCCTTATTACTTAGCTTTGTGCATGGTTCATGCAATTGTTAGGTCGTTGGTTCATAAAGGTTTTTGATCTGTTAGTATTCATCTTAGTAAGTTAGCTGTTTCTCCCTGCCTTGGATGCTTTTATCTATTGATGTTTTAATTGCAAGCTTTGTATATGCCTACTTTACTTGCCATTAAGATCATTTTCTTTTGCTATTTTTTTTTCATTGTGTATTCATGGTTTTGCCTGATTGTTATAGGCTGTTGCATCTGAGGTCAATCAAATACAGATTCAAAGAGGCACAGATGTGGATAGTGATGCTAAAGGCAGCTTGATTCATGACCATGACAGCATTCGTTGTGATGATCAAATGAAAGCAGATTGTCAGTTGAAATGTTTTGAAGAAGATAAATCCACATCATCACCCAAGACTAGTTCTCACTCTGTGCATTTGGACACTGGAGAAGATAATAACAATAGTGAAGGGGCAAAGTTTGAGGTGGTTGCTGCAGAAGAACTTGATATGCTTCTTAATACGCTTGGTGGAACTCATCTTTCTGGCTCCAATTTAGATGAATCATTTGGAAACAAATCAACATTGCAAGATGTGAAAGTCAATCAACCAGATAAGAAAGTTACACCTAGCACTTCATCCAAATCATCGGTGACTGCTGCTTGTGACGATGCTCTAGATGACTTGCTTTCAGAGACTTCTCCTTCTGTCCAGAATGAAGGTTTTGCTGAACCAGGCTCAACTTCCAAGAATGACCACAATATTGACATCAGATATGCTAACCAGATAGATATATCTACATCTATTGATGATTTGGTGGATGACTTGCTCACTGACACTTCACTGTGCTTGAATGGACAGAAACAAACTACATCTGCTAAGGGCAAAGACAACATCTCAAGTGTCAGTGTTCCTCCTAATTCCGGACCCTCAAATGCGTCGGACGATTTTGATTCATGGTTTGATTCTCTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017560