BGIOSGA017568

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Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017568| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017568, complete gene.| tag = OsI_209...")
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Gene Name

BGIOSGA017568

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017568, complete gene.

LocusTag

OsI_20975

Ensembl Transcript ID

BGIOSGA017568-TA

Ensembl Protein ID

BGIOSGA017568-PA

Length

4078

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29245626..29249703

Sequence Coding Region

29249527..29249703,29248686..29248802,29248116..29248407,29247663..29247815,29247162..29247387
,29247009..29247072,29246338..29246436,29245824..29246249,29245626..29245727

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29245626..29249703 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29245626..29249703 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATGATCTTCTCCAGGTCCAGTGCTGGTTCCCCCTTCCATCCTTCCAGTCCCACTCCCACTGATGAGGAAGGATCGCCGTCGTCTTCCCCGCCGTTTCCTCGCCGTCCAACGTTCCCAAGTAGCGGCAAACGCGGCCCGCCGGCGCCGACGAGGTGCAGGATGCCAGCCAAGGGCAAAGGTAAAGCTCGGTGTGATGCTTACGAGGAGCCCATAGACGTTTCGGACGACGACGACACTGACCCGAGCAATAGCGATAGCCATGGCCTGATCAACGACCTGCCTGCCAAGATGTTGGATGAGGCCATGGCAGAGATCAAAGATTCATTTCAGGCAACGCAGGAAGGCATTCTGGCATTGTTAGCGAAGCACAACGAGAAATGCGGCCTCGTTTTTTCGTCTTTAACGGAAGGCATGCAGGCTTTGGCAGCGGAACACGGTGAGAAATGTTACTCGGCTGTAATGGATCAAGCTGTCCAAGCAAATCCCGATCGATCCAACGCTCGATTACATGGCGCAATCGAAGGTGTGGATACTGACGATATGCTAGCAGCAACGATGCGAAGAACTGCATCACATGGTGCAAGAGGGCATACAGAACAGCAAAATCCAGCTGCTGACCGTGCAAATCCATTGTCGGTGTCACGCACGGCCCCTATCGCACATCACCATCTATTAAAATCAGCAGCCCAAGCGACGTCAGCAGTTCATACAAACCATCGTGGGTTAGATCAAGGAGACGGCGCCACATTGGATCAAAACAACAATCGTGCACAGGATAAGTACCAAGGGCAATCAGAACGTTGCGAGACGCAGATGACGAAAGAGGCGGGGAATCATCTAAGGCCATCTTGCATGTCATCGTTTTCAATGCGCACAGTTCATGAATGGTGGCCAAACTCTATATTAGCTGGGAGATTATTCCGTTGGCTTGAGGAGTCATGTGATGACGATATAACCGGGGTTTGGTTCAAGCACGACAAGCCTACACCAATTGAGATAAGTGCCAAGGAAATCAAAATGCAGAAAGCTTTGATGTTTGAACCAAACTTCAGTTCCATGAAAGCAGTCAGTGACATGTTTGATCAACATATTAGCGGCTACAAAATACAGAACTGCCAACTGCTCATTTCCCCGGTTCAATTAGCTAGTGATACATGGGCATGCTACGTTTGGGACATGGAGAAGAGGCAAATGCACATTTTGGACCCTGTCTTGCAACACCGGGAGGTCTCCGATGTGAGTGCTAAGCACCGTCAGACAGTTACGATAATCCACACAGGCTTGCTAACATGTATAAACAAATTCTTCGATGACTGGGATATTAACCCGGATGGATGGACATGTACGTACCACACAAAGATTAGCCCGAGGTGCCAAAAGTGGGTAGCTTCTGCCAATGCCACACATACACAAGAAAGAAAAGAAAATGAAATTTCATCCCATAACAAATTTGAGTCATCTTCCTGCTGCAGATGGAACTCTGTTTTTCACACATTATACTATGCGCGCGAGTTCTATGATGGCAAGCTGAGCAATGTTCTAGATTCGGGTAGGGTTGCTGCCTTGCGCAGGGATCTTTTCTACAAGCTCCTGACTATGGAAGGGAACAGCGCTGAGCTGCCAAGTCACATTGCGAGATACTTGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAMIFSRSSAGSPFHPSSPTPTDEEGSPSSSPPFPRRPTFPSSGKRGPPAPTRCRMPAKGKGKARCDAYEEPIDVSDDDDTDPSNSDSHGLINDLPAKMLDEAMAEIKDSFQATQEGILALLAKHNEKCGLVFSSLTEGMQALAAEHGEKCYSAVMDQAVQANPDRSNARLHGAIEGVDTDDMLAATMRRTASHGARGHTEQQNPAADRANPLSVSRTAPIAHHHLLKSAAQATSAVHTNHRGLDQGDGATLDQNNNRAQDKYQGQSERCETQMTKEAGNHLRPSCMSSFSMRTVHEWWPNSILAGRLFRWLEESCDDDITGVWFKHDKPTPIEISAKEIKMQKALMFEPNFSSMKAVSDMFDQHISGYKIQNCQLLISPVQLASDTWACYVWDMEKRQMHILDPVLQHREVSDVSAKHRQTVTIIHTGLLTCINKFFDDWDINPDGWTCTYHTKISPRCQKWVASANATHTQERKENEISSHNKFESSSCCRWNSVFHTLYYAREFYDGKLSNVLDSGRVAALRRDLFYKLLTMEGNSAELPSHIARYLE</aaseq>

Gene Sequence

<dnaseqindica>1..177#902..1018#1297..1588#1889..2041#2317..2542#2632..2695#3268..3366#3455..3880#3977..4078#ATGGCCATGATCTTCTCCAGGTCCAGTGCTGGTTCCCCCTTCCATCCTTCCAGTCCCACTCCCACTGATGAGGAAGGATCGCCGTCGTCTTCCCCGCCGTTTCCTCGCCGTCCAACGTTCCCAAGTAGCGGCAAACGCGGCCCGCCGGCGCCGACGAGGTGCAGGATGCCAGCCAAGGTAGGTGACAATCCCCCCTCTCATCGCTCCGCCCGCTTCCTGCATTTTTTTTTCTACTGTTCTTTTTTTTTTTTCTTCCGCCTAGACGAAATATTTCCTCAATCCTATAGCATAAGGGATTTTCGAGTAATGTGACAAATCAAGTCCCTAAAAAATATGGCCCATTACGCCATTACGGCATCGTTCACTAGAAGTGGTTGGGGCCAAAATGGTGGGTTTATTGCAGCGAGATGATGGTGTTTTACTGTTACTAGTAGTAGGAATTATTTCCTCCGTTTCATAATAAATTTGTTTTTAGCTTTTATATTTATCTTAAAATAAGTTTATTTTTAGAGTTATCGTTGCATTAAGATTTAATAACGTATATGTATTCTAGTTGTTGGTTGGTTTTGTATTGGTATGTGTGAGATTGGTTAAAAATGAACTTATTAGTTTGGGAGGGACGGAGGGAGTAGTCACAGGCTGCCTCGGGCTCAAGCATTGCAACGGGACGGGATCTGCTGAACGTGATTCTTTCTTTTCTCTCTTTTTCAGAATCTCTTTACGTTTGGTCTCTTTTTTTTATATACAATGGATTTTTTTCAGCGGTTTTTCAGTGGGAAGGGAAAAAATACGATTGTGCTTTACTAAGACGGTAGAGATCAAAGCTAAGCGTATTACTGCGTAGTACTCCATTTTGAAGCGAAAAAATGTTATTGAGTCAGTTGTTTCTTCATCAATGAAGGGCAAAGGTAAAGCTCGGTGTGATGCTTACGAGGAGCCCATAGACGTTTCGGACGACGACGACACTGACCCGAGCAATAGCGATAGCCATGGCCTGATCAACGACCTGCCTGCCAAGGTTAGCCGCTAGTCCCTTCATCCCAACAAAACTAGTTGCATATTACACCTTGCTAATTAAATCGATTCTGAAACTAATTAATCCCGTCCTTTTGTTGAGAAACGCCCAAGGTCTTCTCGCTACCTCCAAGGTGGTGGGCTAGCTAGCTAGCCTGGGTTTAAAGCCCCACCCCTTCTATTTATTTGATATTAGATTTTTCCTTAATATTTGTGTTTTTTTTTCTATTCTCGTTGCAGCTGTCCGATCTATCGCGTCATTTTGGCGAACGATGCACGCAGATGTTGGATGAGGCCATGGCAGAGATCAAAGATTCATTTCAGGCAACGCAGGAAGGCATTCTGGCATTGTTAGCGAAGCACAACGAGAAATGCGGCCTCGTTTTTTCGTCTTTAACGGAAGGCATGCAGGCTTTGGCAGCGGAACACGGTGAGAAATGTTACTCGGCTGTAATGGATCAAGCTGTCCAAGCAAATCCCGATCGATCCAACGCTCGATTACATGGCGCAATCGAAGGTGTGGATACTGACGATATGCTAGCAGCAACGATGCGAAGAACTGCATCACATGGTGGTAAGCTCATACTAGTAAAGGTTTCTACATTTTCAAAGTGAAAAGAAAAACACTTACAATTAGTTTCTGTGCACCGTATGCATGTCAAAGAAGGTGCCAAGACTACTCGTAAACGAAGCAAGTTGTCACATGAGGCTTCTGCCGCAAATAGATCCCAAACCCCCATTGATTTGAGAGGTATTGCGTTTGACATGATGTTGCATTTTTCGATCGAGTATATATGTGTACTCATGACACAAACATTTCAATCCATCAGAGGCAAAGGTGACTTGTTAGGGCCAAACAAATTGGCAAATGCAGCAAGAGGGCATACAGAACAGCAAAATCCAGCTGCTGACCGTGCAAATCCATTGTCGGTGTCACGCACGGCCCCTATCGCACATCACCATCTATTAAAATCAGCAGCCCAAGCGACGTCAGCAGTTCATACAAACCATCGTGGGTTAGATCAAGGTTAGCTTGCCAAGAAAAAAAAAGGTAAAAACACTTCTGAGTAATGTGCAGTAATGTGACTATTGTTTTTCCCCCACAAGTCCAAAACACAGTTTTCCAAACGCAAGACAAATGTGGCCTCGATTGGTTGGTATCAGCAGCTGCTGTGGGAGAAGCTAACATGAGTACGTATACACCTCGTATATATCCTTGAACCCACCCAACACACAACAAATTAAATGAGAGATTTTAAATAATGAAATGCATCTATCGTGTTTGTGTTGCTGCTGTTGCAGGAGACGGCGCCACATTGGATCAAAACAACAATCGTGCACAGGATAAGTACCAAGGGCAATCAGAACGTTGCGAGACGCAGATGACGAAAGAGGCGGGGAATCATCTAAGGCCATCTTGCATGTCATCGTTTTCAATGCGCACAGTTCATGAATGGTGGCCAAACTCTATATTAGCTGGGAGATTATTCCGTTGGCTTGAGGAGTCATGTGATGACGATATAACCGGGTGTGTGCAAAAGGAGTTCTTTAAAAATGCGTGAATTCTCATTACACAAAAACTTTGTACTGATTTTTAATTGTTTATCCTATATGAAGGGTTTGGTTCAAGCACGACAAGCCTACACCAATTGAGATAAGTGCCAAGGAAATCAAAATGCAGGTCATCCGCGGTGGTATTCCACATGCGGACCTTTGTTCAGCATTGATCAGACTCTACCAACAGTTAGATGCCAAGATGAATACAAACCCATGTGGGCAGCGGTGGCGTCACTTCTTCCTACCCCAATTCGCGGTACACACACATATATATATACACACACACACACACATATATATATATATATATATATGTATATATGTATATGTATATGTGTATATGTATATGTGTATATATATATATGTATATATATACATATGTATGTATATATATATATGTGTATATATATATACGTATGTATATATATGTATATGTGTATATATATATGTATATGTGTATATGTATATATCTATGTATATATATATCATATATATGTATAGTATAGTATATATATGTATATATGTAGATATGTGTATGTATATACATATACATATATATATATATATATGTATGTATACATGTATACATGTGTATATGTATATACATGTATACATGTGTATATGTATATGTATAAGAAATCATGGTTAAAACAATGACCAAAGCTTGGTGTCTTTTCCCCTTGATTTTGGTTTTAGAAAGCTTTGATGTTTGAACCAAACTTCAGTTCCATGAAAGCAGTCAGTGACATGTTTGATCAACATATTAGCGGCTACAAAATACAGAACTGCCAACTGGTACGGATTATATATTGTGTTTCTTTATCCAATCTCCTTTGATCATCACATATACTGACTAGTGAACCATTTTATTTCGAAAATACAGCTCATTTCCCCGGTTCAATTAGCTAGTGATACATGGGCATGCTACGTTTGGGACATGGAGAAGAGGCAAATGCACATTTTGGACCCTGTCTTGCAACACCGGGAGGTCTCCGATGTGAGTGCTAAGCACCGTCAGACAGTTACGATAATCCACACAGGCTTGCTAACATGTATAAACAAATTCTTCGATGACTGGGATATTAACCCGGATGGATGGACATGTACGTACCACACAAAGATTAGCCCGAGGTGCCAAAAGTGGGTAGCTTCTGCCAATGCCACACATACACAAGAAAGAAAAGAAAATGAAATTTCATCCCATAACAAATTTGAGTCATCTTCCTGCTGCAGATGGAACTCTGTTTTTCACACATTATACTATGCGCGCGAGTTCTATGATGGCAAGCTGAGCAATGTTCTAGATTCGGTGAGCACATTGCATTGATACATTTCCTCTTTTTCTTTCCACCAATTCGATTAACCTGAATAATAACCGTGATTCCCCATCATTTGTCTGTCGCAGGGTAGGGTTGCTGCCTTGCGCAGGGATCTTTTCTACAAGCTCCTGACTATGGAAGGGAACAGCGCTGAGCTGCCAAGTCACATTGCGAGATACTTGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017568

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