BGIOSGA017570

From RiceWiki
Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017570| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017570, complete gene.| tag = OJ1115_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017570

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017570, complete gene.

LocusTag

OJ1115_B06.12

Ensembl Transcript ID

BGIOSGA017570-TA

Ensembl Protein ID

BGIOSGA017570-PA

Length

2825

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29223222..29226046

Sequence Coding Region

29225807..29226046,29224949..29224994,29224610..29224696,29224394..29224518,29223991..29224130
,29223860..29223911,29223644..29223754,29223222..29223314

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29223222..29226046 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29223222..29226046 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGATCTGCCCGCCGTCGTCGGAATCCTCGCCGGCGCCGGGGTTGGGGGGGCGCGCGTTGATCTTCCACGGGCTGGCCCTCGGCGCGGCGGCGGCGGCTGCGGCGGCCGCGGCCTACTTGTACAGGCGGCCGGGCGGGTTCCGCGGCCGCGCGGTGGGCATCATACCGGCGCGCTTCGCCTCCTCCCGCTTCGAGGGGAAGCCGCTCGCCCCCATCCTCGGCAAGCCCATGATACAGAGAACATGGGAAAGAGTTATGTTAGCCTCCTCTTTGGACCATGTTGTCGTGGCAACGGACGATGAAAGAATAGCTGAATGTTGTAGAGGATTCGGAGCTGATGTAATAATGACATCAGAATCATGCAGAAATGGATCTGAGCGTTGCTGTGAGGCTCTTCAAAAGCTAAACAAGCATTATGATATTGTTGTCAATATTCAAGGAGACGAGCCTCTTATCGAACCAGAGATAATAGATGGTGTAGTTATGGCACTACAGCGAGCTCCTGATGCAGTCTTTAGCACAGCTGTCACTGCACTGAAACCTGAAGATGCATCTGATACAAATCGAGTGAAGTGTGTTTTAGATAACCAGGGTTATGCAATATACTTCTCAAGAGGGCTGATTCCATTTAATAAATCAGGGAAAGTCAATCCTCAGTTTCCATATCTTCTTCATCTGGGCATTGCGGGCTTTGATTCCAAGTTTTTGAAGATCTATCCAGAGCTTCCACCAACTCCATTACAGCTCGAAGAGGATCTCGAGCAACTTAAAGTTCTTGAAAATGGATACAGGATGAAGGTAATCAAAGTTGATCATGATGCCCATGGTGTGGATGCGCCTGAAGATGTTGAGAAAATAGAAGCATTGATGCATGCAAGGAACATCCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MPICPPSSESSPAPGLGGRALIFHGLALGAAAAAAAAAAYLYRRPGGFRGRAVGIIPARFASSRFEGKPLAPILGKPMIQRTWERVMLASSLDHVVVATDDERIAECCRGFGADVIMTSESCRNGSERCCEALQKLNKHYDIVVNIQGDEPLIEPEIIDGVVMALQRAPDAVFSTAVTALKPEDASDTNRVKCVLDNQGYAIYFSRGLIPFNKSGKVNPQFPYLLHLGIAGFDSKFLKIYPELPPTPLQLEEDLEQLKVLENGYRMKVIKVDHDAHGVDAPEDVEKIEALMHARNIQ</aaseq>

Gene Sequence

<dnaseqindica>1..240#1053..1098#1351..1437#1529..1653#1917..2056#2136..2187#2293..2403#2733..2825#ATGCCGATCTGCCCGCCGTCGTCGGAATCCTCGCCGGCGCCGGGGTTGGGGGGGCGCGCGTTGATCTTCCACGGGCTGGCCCTCGGCGCGGCGGCGGCGGCTGCGGCGGCCGCGGCCTACTTGTACAGGCGGCCGGGCGGGTTCCGCGGCCGCGCGGTGGGCATCATACCGGCGCGCTTCGCCTCCTCCCGCTTCGAGGGGAAGCCGCTCGCCCCCATCCTCGGCAAGCCCATGATACAGGTAGGTCCCGACTCCCGTCCTACCGCCTACGCCACCCGCTTGATTTGCGCTTTTGCTTCGCGTGTTGAGACTGGATCTGAGAGTGCGAGTGGAAAGCTTGTGCTGAGGAATTCAAGCGAGGAAATGGAATCGGTGATGAAAACCCGCGAGATGAGTTCCATTCGTGTTTTCTCGTTGCGATTTGCTGCTGCTGCTGCTGTGCCTGTGGCGTCCTCTTCATCAGGATGCAATTTCACTACAGTAGTAGGCAGTAGCAGCAGCAGCAGCAGTGACTTGCTGAGCTTTCAGTTGGATTCCATTATTGGGAATTGCTCGTTTCGTTACGTGCGACATGGTCGTACGCGTCAAGACCTTCGATATTCTTCTACATGTTAGATGTTGTTATACCATGTCGCAGTTTCTTGGTTGTTTCGAGCTGTGGAATGAGGGTTCTCATTTTGCGTTTCGTCCAGAATTCACATTGTAACATCTCTTTACTTCAACACTACGGCAAATTAGGTGGGGATGCCTAATTTACCCTAAGGACTTTAAGGAGTCCTTTAAAGTGAATGCAATTTTGTTGTATTATTAATATTACTTTGAGCACCGAGGTTAGTGCCACAGACCAGAGCTGTCTGATGAGGGATTATGCTACTTCAAGTTATCTTCTATGTGATTGACATATAGAATGCGCTATTGCCTATTGGATAACGTTGATATGATATCTTGCAAGTTGGTTTGTTGAATAATCTGTGTAGTTCCTCATGTTGGGAATTTTTTTTGTCCTAAGCAGATCTAGTTAGTCCTGAAACTTTTACCTTACACTTTTACAGAGAACATGGGAAAGAGTTATGTTAGCCTCCTCTTTGGACCATGTTGGTAAGTCCAAGCTCATAAATCTTATATTTAATCTTTTCCTGTTTCTGCTCAAAACATTATGTTTAGTATCATTGTATATTTTGACTTGTGGCCTATCTCTCTTTTGTGACACCATTTGTACAAGTAATTGTTGTTTATAACTTTTCTTTCGTGATATTAGTCGTAGGTGTTTTTGAATCTGCATTGCACATGCTAATCGTTTTGATACTGCCAGTCCACTCAGCCATTCTCACCATTTTCTCTGTGTCATAGTCGTGGCAACGGACGATGAAAGAATAGCTGAATGTTGTAGAGGATTCGGAGCTGATGTAATAATGACATCAGAATCATGCAGAAATGGTACAGCTTATGTTGTTTTGTCATTATTTGCCCTTTCCATGATTACTTGATTAACCCCTACATGTTTTTCGTTGGCATATGCTTCATTTAGGATCTGAGCGTTGCTGTGAGGCTCTTCAAAAGCTAAACAAGCATTATGATATTGTTGTCAATATTCAAGGAGACGAGCCTCTTATCGAACCAGAGATAATAGATGGTGTAGTTATGGCACTACAGGTTGTTACTTATGTAAACTATATCTTGCTAGTTTTTGCAGTTCCCATCAAATAAACAAATTTTTATTAGATATTTTTTTGAACTAGGGCTTTTATTTTATCATAAGCAAGCTTAGACTTGAATACATTGAAAGTTTTAAATTCTTCATTGGAGAATACAGAGTGCACTTGATGTTGCACTCCTATTTATCTTTTACCTTTTGCATCTCCTTTTAATTCACGTAATTTACTTGCTCTAGTGATGTCCTTCAATTTGGCTTGCAGCGAGCTCCTGATGCAGTCTTTAGCACAGCTGTCACTGCACTGAAACCTGAAGATGCATCTGATACAAATCGAGTGAAGTGTGTTTTAGATAACCAGGGTTATGCAATATACTTCTCAAGAGGGCTGATTCCATTTAATAAGTGAGATACTACCTCCGTTTTTTAATAGATGATGCTATTAAATCGATCAAATTGTCACTTGCAATTTTGAACATTTCAGATCAGGGAAAGTCAATCCTCAGTTTCCATATCTTCTTCATCTGGGCATTGCGGTATTTATCAACTCATACTTCATTCTCAGCTTTGTGTTATTTTCTTTTGGATGCTCCTGTAGCCTGTAGTGCCTACTCTTCATAGTGTGCCTTTTTTTCATGAAGGGCTTTGATTCCAAGTTTTTGAAGATCTATCCAGAGCTTCCACCAACTCCATTACAGCTCGAAGAGGATCTCGAGCAACTTAAAGTTCTTGAAAATGGATACAGGATGAAGGTAAGCCAGATAGAAATTGTATTTGTTATTGCTATGCTGTTTTGCTATGACTCCTGGAAAAATTAGGTCATCTGCGTGTTATTGTTGGAAATTCCTGTTTTAGAACAAGTAACATTTATCAATCATACCACAACCCACATCTTATGTTCGTTATAATGCCAAGATGGTGAACTTGTATGTGTCAAAGACAAATTTGTGATGGTAGGCATCAGTGCATGCTATTCATTGTTCAGTATCGTAAGCCTTTATATGGTGTATACAAATGTCGCGTTTGCTAGCTTATGCCTTATACTGCTGAATTGAATTTTCATTATCCTCGTTGATAACAGGTAATCAAAGTTGATCATGATGCCCATGGTGTGGATGCGCCTGAAGATGTTGAGAAAATAGAAGCATTGATGCATGCAAGGAACATCCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017570

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017570&oldid=46326"