BGIOSGA017578

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Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017578| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017578, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017578

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017578, complete gene.

LocusTag

OS05G0559400

Ensembl Transcript ID

BGIOSGA017578-TA

Ensembl Protein ID

BGIOSGA017578-PA

Length

3800

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29109325..29113124

Sequence Coding Region

29112748..29113124,29111859..29112088,29110896..29111037,29110125..29110186,29109325..29109362

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29109325..29113124 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29109325..29113124 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGCCGCTCGAAGCGCGAGACTACATCGGGCTCGGGGCGACCCCGGCCTCGTCCTCCTCCTCCTGCTGCGCGTCGACCCCCGTCGCCGAGGTCGTCGGGGCGCACCTCGCGCTCCGCCTCGGCCTCCCGGGGTCGGAGTCGCCCGCCCGCGCTGAGGCGGAGGCTGTCGTCGTCGACGCCGCGCTCACGCTCGGCCCTGCTCCTCCTCCCAGGGGCGGCGCCAAGCGCGGGTTCGTCGACTCCCTCGACCGATCCGAGGGCCGTCGTGCTGCTGCCACCGCCGGTGATGATGAGAGGGGCGTGAGGGAGGAGGAGGAGGAGGAGGAGAAGGGGTTGGGGGAAGCTGCTGCTGGAGCTCCGCGAGCTGCCAAGGCACAAGTTGTTGGATGGCCACCTGTGCGAAGCTACCGGAAGAATACATTGGCCGCCAGTGCCACAAAGACAAAGGGGGAAGACCAAGGCAAAAGTGAGGTAGGATGTTGCTATGTTAAGGTCAGCATGGATGGAGCCCCATACCTTAGGAAGGTTGACCTCAAGACCTATTCAAGCTATGAAGATCTTTCACTTGCTCTTGAGAAGATGTTCAGCTGCTTTATCACTGGTAGGAGCAGTTCACATAAAACATCAAAAAGAGACAGGCTGACTGATGGTTCTAGGGCTGATGCCCTTAAGGACCAAGAGTATGTTCTTACCTATGAAGACAAGGATGCTGACTGGATGCTTGTTGGTGATCTTCCTTGGGACTTGTTTACTACTAGTTGTCGGAAACTGCGGATCATGAGAGGTTCAGATGCTGCTGGAATTGCTCCGAGATCACTGGAACAGACAGGTCAGAACAAATAG</cdnaseq>

Protein Sequence

<aaseq>MPPPLEARDYIGLGATPASSSSSCCASTPVAEVVGAHLALRLGLPGSESPARAEAEAVVVDAALTLGPAPPPRGGAKRGFVDSLDRSEGRRAAATAGDDERGVREEEEEEEKGLGEAAAGAPRAAKAQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGIAPRSLEQTGQNK</aaseq>

Gene Sequence

<dnaseqindica>1..377#1037..1266#2088..2229#2939..3000#3763..3800#ATGCCGCCGCCGCTCGAAGCGCGAGACTACATCGGGCTCGGGGCGACCCCGGCCTCGTCCTCCTCCTCCTGCTGCGCGTCGACCCCCGTCGCCGAGGTCGTCGGGGCGCACCTCGCGCTCCGCCTCGGCCTCCCGGGGTCGGAGTCGCCCGCCCGCGCTGAGGCGGAGGCTGTCGTCGTCGACGCCGCGCTCACGCTCGGCCCTGCTCCTCCTCCCAGGGGCGGCGCCAAGCGCGGGTTCGTCGACTCCCTCGACCGATCCGAGGGCCGTCGTGCTGCTGCCACCGCCGGTGATGATGAGAGGGGCGTGAGGGAGGAGGAGGAGGAGGAGGAGAAGGGGTTGGGGGAAGCTGCTGCTGGAGCTCCGCGAGCTGCCAAGTAAGCATGCGTGCTCCTGTTTGGTTTTGAGTTGGTTTGATTTAGAGCTCTCTGGGCTAATTTATAGCTTGTTAAATATAGGAATATTTGATTTGCTGGTTTGATGGCGCTTCATTAGTTCTAGATGTTAAAATAGGAGCAGTAGTGACCAATTAAATTGATACTAGTTCTCATGGTTATTTTCTCTGGAATGTAGAAATGATCAAATACATAGTAATAGTATATTTTGCTGTGCTAATTGTTAGTCAACAGTTATAAAGTTTGAATCTTGAGACACACGTGCGCTTTATGTTCATCATTGGAGGGGGTACTTGCTAAACTGAACACGGAAGAAAAAGATTCCTGGTAAAACCGCCACCTGACTGGAAAAAGCTCGAGCTTTGTTGAAAAATTGTCACATAACCAGGTGTTGTGACCAAATGGTGCTGCCTCTCTTGATTTTCCACCTGCACTGGTACTGTTGCTCAGGTGATATAACTAAACTGCTTAGGAGTTAGGATAGAGATATGTAATAAACTACTTGTAACCAGGTCTTGAAGGGTTCAAGGGACCTGAGTTCAGTTTTTTCATGAAGTTGGTGGTTAGTTGAAGATCATATGTCACTAGATATATGTTTTGTTCTGAAACATTTAGTCTGATAGTATGTGTTTATGCGCTAGGGCACAAGTTGTTGGATGGCCACCTGTGCGAAGCTACCGGAAGAATACATTGGCCGCCAGTGCCACAAAGACAAAGGGGGAAGACCAAGGCAAAAGTGAGGTAGGATGTTGCTATGTTAAGGTCAGCATGGATGGAGCCCCATACCTTAGGAAGGTTGACCTCAAGACCTATTCAAGCTATGAAGATCTTTCACTTGCTCTTGAGAAGATGTTCAGCTGCTTTATCACTGGTGAGTATTTCTGTTTTCTGTTTGTTTCTTTGTAGATTTGTTCAATTTGCTTTCTTTTGCATGTAGCTTTAGATGCCAATTAGTTTGGTTGTGTACTTGTGTCATTGCGTGCATCCTTATTTGGTACATAGACTGGAAGTAAGTTATACTTCCATTATCCAAAAAAAATCAATTTGTGTGCATTAGTTTGATGAAATAGAACGATATTTTGTGTGCATTAAATATGTAGTTAAGACAGATATTCTGTGTAATGAAATATTCCATTATCTAATAAAAAGACTGATATAATCCATGTCTTTTTTCCTCGCTTTTGGAAGATCTTCGGAGTTATAAAATAATGTAATGATAGAAGGGGAAGCTGATGCATGGCTACTAGTGGATTTGGTCTAGCTGGACTACAGTTGCCAGATTATTTTGACTAAGCATATTTCTTCATCTGAGTCAAGTAGCCAAGAACTAACCGTAGAACAATAAGTGCTGTGCTTAGATGCTAAACCCTGTTTTCCTATGCGGCGGTGAAACAATAGAAAAGTGATAATGAAGTCCATTAGTAAAAAGAGAACTCTTGCGGTAACTATGTTTGTTTAAAATTTGATTTGCTTACTTTACCGATATTTTGACACAGTTATTGTGTTTGCACTGTATGTTTGTGTAAGTTGAAATAGCATTTCCATTTTTACTAAGCCCATGTATACCTTGATTTTGGGACGCTCGTGTGTATTCAACTACAAAAGTGCTTTCTATTGTCTGTATTTTACATATATCCAGGAAACATATTAATGGTTGACTTATATTAATGGTTGACTTGTTTTGCAATACAGGTAGGAGCAGTTCACATAAAACATCAAAAAGAGACAGGCTGACTGATGGTTCTAGGGCTGATGCCCTTAAGGACCAAGAGTATGTTCTTACCTATGAAGACAAGGATGCTGACTGGATGCTTGTTGGTGATCTTCCTTGGGAGTGAGTTCTAACTTTGTGATTATGCATCTTATCTTATTTTAATGGTGATGGTTTTTATGATTTTCTCTTGCGGCATTCTTGTCTTGCATAGAATACGTTCAGACATTCAGATAACAGTATTCTTCTGCTGTTGATGCAGTAACTGTAGTTAGGAGATCTTGATAGTGTATGATGGGAGCTTGATTTACCAATAATGTTACTTCTTCTAGTGGTTTGAACTCGATAACACATTACTAACACTTATGATGATATTTGGAGTCAACTAAAATTATGCAAACCAATGCCCTGTAACTTGCTGAAAAGTTAGATGGACTCGTGTAAAATGTTTATTCAAGTCTCTCTCTCTAGAGTTCTCTGAGTACTCCAGTTTCACTCTTCAGTATGAATTAGAATTATAAATCCTTTCTGAATTTTGATTGTTCTCTTTGAGAAAGTTCGAGTTCTATGGGCAATGTTTTTTCATACTTTTAGTTGGCACATTTCAAGAGTTTGTACAGTCTACCAATAAAAATTTATCTTGTATAAAAATGTGTCACTCCCACCCCTCAGTACTACACTGTTTCGTATATCAACAGACAAAATTGTTCACAAGTTCAATATGACCTATGAATTGTTTGACTGAGCTACCATGTTTTTTTTTTCCCGATGTTTAAGCAGTTATTTACAATCATTCTTGGTTACCATCTAATATCTTGTACATCATTTTCAGCTTGTTTACTACTAGTTGTCGGAAACTGCGGATCATGAGAGGTTCAGATGCTGCTGGAATTGGTATGTGCAATATCTGTAGCACTTGGCCATACTTTGATTTCAAGGTTTCATGAGACAAATTAATCATTCAAGCATTCACATGCTTTTCCTTTGAGATGCGCATTATGCTAATATTGGTGATAACTTGGACCTTGCTGGTTAGTTGTACCTGTACAATTACAAATAAATTATGTCACATGTTTAAATTTTTCATTGATGTTTATTGGCATAGCCTCAGATAACTTGAGTAACGGTAACTCGGTAAGACATAAGACATGAAAAAGGTGAGGATATCGCATGAAATTTACCAGTCCTACAATTGAAGACACAAATCTGATTGTATCCTTGATTTTGGAATAAAGCAAGTGAACAAATACAACATGTTCTTTGGCCTTTGGAGGTATATTCCTAAAATACAGAATACAAATATAACTGCACGCCTTATGCATCGTCTATTGCAACAAATCACTAGTGATTTGGCTGAAGGTGGATCAGTCCACATTGCTAAAATGCTAAAAGCCTAAAACTATTTTGACTTAATCTGGATGACCTGGAACTCTGCAACTAAGTATTACAGATCTGCCTTTATATTTAGAGGCATATCTAAACATCATTTTCCATTGGTATCTGATATTTGGGAACACTGGTGGATGCTCTCTCATTAGCTAGCAGCATTTTTCTTATGGGGTTTTGACCGTAACTTCTTGATAACTTAATGCATCCATTCCTTAATGAATATGTATTGATTTGTCCTTGTCTGAAGTATCTTCTGTGTCCCTGCAGCTCCGAGATCACTGGAACAGACAGGTCAGAACAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017578