BGIOSGA017586

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Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017586| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017586, complete gene.| tag = OJ1214_...")
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Gene Name

BGIOSGA017586

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017586, complete gene.

LocusTag

OJ1214_E03.20

Ensembl Transcript ID

BGIOSGA017586-TA

Ensembl Protein ID

BGIOSGA017586-PA

Length

6896

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29036100..29042995

Sequence Coding Region

29041754..29042995,29039454..29039477,29039181..29039184,29038071..29038278,29037866..29037970
,29037625..29037753,29037338..29037387,29037164..29037261,29036770..29037054
,29036100..29036603

Genome Context

<gbrowseImage1> name=IndicaChromosome05:29036100..29042995 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:29036100..29042995 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGGCGCAGCAGCAGAAGCACGAGGTGGACCGGGCGACGGTGGCCGGAGCCGTGGCCGCGCTGTTCAAGTGGATGCGCGCGCGCGCGGCGGAGGCTCCACCGAACCTCCTCGCCGACGAGCGCGACGACCTCCTGCTCCTCCAGCTCTCCCTCCGCCGCATCCCGCCCTCACCGACGACCAAGCCGCGCCTCCTTCCGCTCCCCCACCCCGTCATCGTCCCCGGCGAGTCGGCCTCCATCTGCGTCATCTCCGACGACCGCCCCAAGTCCCGCTCCCCGGCCGCCTCCGACCTGCTCGACGCGTCCAGGTCCCACCACCTCCCCGTCTCCGAGGTCATCCCGCTCTCCGCCCTCCGCACCGACTACCGCCCGTACGAGTCCCGCCGCCGCCTCGCCGCCTCCCACGACCTCTTCATCGCCGACCGCGCCGTCCTCCCGCTGCTCCCGCGCGTCCTCGGCAAGGCCTTCTACTCCACCAAGAAGGCCCCCGTCGCCGTCGACTTCGCCCGCACCGGGTGGCTGGAGCAGGTCCGCAAGGTGATGAACTCGACTTTTCTCTACCTGCGGACGGGCACCTGCTCTGGGATCAAGGTTGGGAGGCTGGACATGAAGGAAGAGGACACCGTGGAGAATGTGATGGCGGCGGTGGAGGCGGCCGTGGAGAATGTGCCCAAGAAGTGGGCGAATGTGAGGTCTCTCCATTTGAAGGCTGTGGATTCAGTTGCATTACCAATTTACCAGGCTGTGCCGGAGTTGGGCATGAAGATCGAGGTCCGGTTTGCACAATTGGAGGGAGAAGTCGGTTCCGGGGAGGTTATCGATGCTTCGGAAGCTGGAGCTGCACTGAAGGGTGTCGGCAAGAAGAAGGCGAAGAAGGCATTGAAACATGTGGAAGAAGAGAATGCTGGTGAGGAAGCTGCACAGGAGAGTGGCAAGAGGAAGAGGGGTAAGAAGCAACTAGCTGAGGATTTGATGGAGCAAGACATCCAAGATGTGAGTGAGAAAAGGAAGAAGGTGAAGGAGGGCACCCCTGCTGCCGAAACGCCGAAGATTAGCAAGAAGGGTAAGGAGAAGAGCAAGCGTGCATTGGACAAGGAGGGGGAGGATGCAAGTGTGGAGGAAGCCAGTAACAAGAAAAAGAAGGGCAAGAAAGAGGTGGTGAGTGATGTTGGGGAGAAGAACAGCAAGGTGAAGAAATCAAATGGTGATAAGGAGAAGAGAAGGACCAGATTAAGGATTGCAGATGCAAAACGGCCGCAGGAAGAACATGTGTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAAAAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAGTAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGGCTTGTCCAGTATTTGTCAAAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACAGTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTCATGCTAAACTAGCTAGGTTCTTACATCGTTTCTGGACAACATTACAGGGATCTTCTAAAGATATAGGATGGCTAAAAAGAACAAAAACATTGCCTTGTTCAGTTGATGGTACAGATCGTTTCAAGGAGCTTTTGTATGGCATCAGAAATGGCATGCATCATCTTCCTAACACACTGGTTTACTTATTCATCCCTGGACTTTTTAGTAATCACAGTCCACTTTACTTCGTCAATACGAAAAGAATCTTTTCGAAGATGGGGCTTACTTGCCATATTGCAAGGATTCATAGTGAGGCATCAGTGGAGAAAAATGCACGGGAACTGAAATTATACATTGAAGAGCTGTACTGGGGTTCTGGTAAACAGGTGTTGCTCCTGGGCCATAGCAAAGGTGGAGTTGATGCGGCTGCGGCGCTTTCGTTGTACTGGTCTGAACTCAAGGGCAAGGTTGCCGGACTGGCATTGGTTCAGAGCCCATATGGTGGCACCCCAATAGCTTCCGACATCCTTCGCAAAGGCCAGATTGCTGATAAGGAGACAAGGAGGATCATGGAACTGATAATATGCAAACTCATCAAGGGTGATATAAGGGCCTTGGAGGATCTCACATATGACAAGAGAAGGGACTTCATCTCCAAGCACAAGCTCCCCGTGGACGAACTGCCGATCATCTCCTTCCACACCGAGGCCAGCACCGCCCCGACGATGCTCGTGACATTGTCGCGCGTCGCCCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCATCGGAGTACGCCGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGGCCTCGGCGGCCATGGCCGTCAGCGCGCTCCACCTGAGGCTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCGGCGGGACGCCGAGGTGCCCGGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGCGTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTGTGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MSAAQQQKHEVDRATVAGAVAALFKWMRARAAEAPPNLLADERDDLLLLQLSLRRIPPSPTTKPRLLPLPHPVIVPGESASICVISDDRPKSRSPAASDLLDASRSHHLPVSEVIPLSALRTDYRPYESRRRLAASHDLFIADRAVLPLLPRVLGKAFYSTKKAPVAVDFARTGWLEQVRKVMNSTFLYLRTGTCSGIKVGRLDMKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKAVDSVALPIYQAVPELGMKIEVRFAQLEGEVGSGEVIDASEAGAALKGVGKKKAKKALKHVEEENAGEEAAQESGKRKRGKKQLAEDLMEQDIQDVSEKRKKVKEGTPAAETPKISKKGKEKSKRALDKEGEDASVEEASNKKKKGKKEVVSDVGEKNSKVKKSNGDKEKRRTRLRIADAKRPQEEHVFGYIDWIPEHHGFQFSPCYKRSLPATERYIRGEAPLLSVSNSTEDQTPNGLSEAIVVRKGLSSICQRFPSFLHDFRLGQQLAFHLRELCSAVASEIHAKLARFLHRFWTTLQGSSKDIGWLKRTKTLPCSVDGTDRFKELLYGIRNGMHHLPNTLVYLFIPGLFSNHSPLYFVNTKRIFSKMGLTCHIARIHSEASVEKNARELKLYIEELYWGSGKQVLLLGHSKGGVDAAAALSLYWSELKGKVAGLALVQSPYGGTPIASDILRKGQIADKETRRIMELIICKLIKGDIRALEDLTYDKRRDFISKHKLPVDELPIISFHTEASTAPTMLVTLSRVAQAELLPWLPLPRFLSSSEYAESLLASLKLPVVVPASAAMAVSALHLRLRYGERSDGLVTRRDAEVPGSVVVRPERRLDHAWMVHSTLRKDHAEADATQMCEALMAMLVEIGRKKCC</aaseq>

Gene Sequence

<dnaseqindica>1..1242#3519..3542#3812..3815#4718..4925#5026..5130#5243..5371#5609..5658#5735..5832#5942..6226#6393..6896#ATGTCGGCGGCGCAGCAGCAGAAGCACGAGGTGGACCGGGCGACGGTGGCCGGAGCCGTGGCCGCGCTGTTCAAGTGGATGCGCGCGCGCGCGGCGGAGGCTCCACCGAACCTCCTCGCCGACGAGCGCGACGACCTCCTGCTCCTCCAGCTCTCCCTCCGCCGCATCCCGCCCTCACCGACGACCAAGCCGCGCCTCCTTCCGCTCCCCCACCCCGTCATCGTCCCCGGCGAGTCGGCCTCCATCTGCGTCATCTCCGACGACCGCCCCAAGTCCCGCTCCCCGGCCGCCTCCGACCTGCTCGACGCGTCCAGGTCCCACCACCTCCCCGTCTCCGAGGTCATCCCGCTCTCCGCCCTCCGCACCGACTACCGCCCGTACGAGTCCCGCCGCCGCCTCGCCGCCTCCCACGACCTCTTCATCGCCGACCGCGCCGTCCTCCCGCTGCTCCCGCGCGTCCTCGGCAAGGCCTTCTACTCCACCAAGAAGGCCCCCGTCGCCGTCGACTTCGCCCGCACCGGGTGGCTGGAGCAGGTCCGCAAGGTGATGAACTCGACTTTTCTCTACCTGCGGACGGGCACCTGCTCTGGGATCAAGGTTGGGAGGCTGGACATGAAGGAAGAGGACACCGTGGAGAATGTGATGGCGGCGGTGGAGGCGGCCGTGGAGAATGTGCCCAAGAAGTGGGCGAATGTGAGGTCTCTCCATTTGAAGGCTGTGGATTCAGTTGCATTACCAATTTACCAGGCTGTGCCGGAGTTGGGCATGAAGATCGAGGTCCGGTTTGCACAATTGGAGGGAGAAGTCGGTTCCGGGGAGGTTATCGATGCTTCGGAAGCTGGAGCTGCACTGAAGGGTGTCGGCAAGAAGAAGGCGAAGAAGGCATTGAAACATGTGGAAGAAGAGAATGCTGGTGAGGAAGCTGCACAGGAGAGTGGCAAGAGGAAGAGGGGTAAGAAGCAACTAGCTGAGGATTTGATGGAGCAAGACATCCAAGATGTGAGTGAGAAAAGGAAGAAGGTGAAGGAGGGCACCCCTGCTGCCGAAACGCCGAAGATTAGCAAGAAGGGTAAGGAGAAGAGCAAGCGTGCATTGGACAAGGAGGGGGAGGATGCAAGTGTGGAGGAAGCCAGTAACAAGAAAAAGAAGGGCAAGAAAGAGGTGGTGAGTGATGTTGGGGAGAAGAACAGCAAGGTGAAGAAATCAAATGGTGATAAGGAGAAGAGAAGGACCAGATTAAGGGTATAGGTTTTATTCTCTATCTCCTGAGAGATGCTTGTGATATTGGTTGATCGACAGTGTCGTGATGTTCATTGTGTTGATTAGCTGGGCTAATCTGATAGTTTATCTGCTGGCAGAAGAACTATGCCACTGTCAAGTTTTTGGTAGCCTTGTAGTACTTTATAAGATCTCCAATCTACCGCAGAATGTTCTACTTTTGTGTGCACTAAAGGTGTCTTCAAAAGTTGTATCTTTTGTTTTTGTTAGCTTACTAGCCTGACTGCCTGAGCCTTCAGGTTAAAGATAGTATGGTAAAACTGTTTCTGGCTTCATGTGGTTCGCATCAATTTTGTGATCATCTAAGAATATGTCTCAGTTGTTGTCTTCCCTGAATTACTCATCTAGCATATGCTGTACACTTGGAAGCCAGTTTCAATAGGAGCTGGGCTGGGCCATTTGTACTCTCTTACTTTGCATGACTTGTGAGGCGATGGAATGGAATTGAATTGCTGCATGCTGTTTACCTTCTCAGTGTTTATCATCCCTTGTGGCTTGTAGATCTTCAAGCAAAGAGCAGAAGTGAAACTAAGACAAATAAGACATGTATAAATGGAGATTAGATTTTTCCCACATCATCTGTTGTGTTGTAAGTTCCAAATTGTTTTTCATGTCAAGTGGTTGATTACAAGACATGAAAACTGCCAACATAGGCAGTTTATTTTGCTCCATGGGAAGCTTGAAAAGATTTGCCTGCATGGACTGGTTTAGATCATTTGGCAAACTAGCCACCGGCTGGTAAGCAGTAACCTTTTTTTTTTGTTGTTGCTGTCAATGCTGAAAAACAGAGTATGATAAGAAAATCTCAAAATTTTAACTTTTCAAAATTTGATAAGCCAGCAAGCAAAACATTGAAGAGTTGGAAGCTGCAGTTCCTGATGGGCAACTCTGCAAAGGTTCAAAGGCTCAAAGGTTGCATCTTTGGCCTTTATGTTTTAGCTATTTAAATGTCAATGCTAAAAAAAATAGAGTATGATAAGAAAATCTCAAAATTTCAACTTTTAAAGTTTGATAAGCCAACAAGCAAAACATTGAAGAGTTGGAAACTGCAGTTCCTGATGGGCAACTCTGCAAAGGTTCGAAGGCTCAAAAGGTTGCATCTTTGGCCCTGGAAGAGTTGGAACATCTTGGAAAGCCAACTTGGCAAGCTCGAACTGGCCTAGTCTAAGAGCAAGGATAATAATGGGCTATAAGGGCACCCACAATGATTATCTATAAGCTCTCTACAAGAGATCCATGTTAGCATATTTTTCTACTTGGAAGAGGTTAAATGAAGAGAGAGAGCAAAGCTAACGAGGCAATGGATTAGAGAGCTATAGATACCCATATAGACATATCATTGAAGTGGTTTACTATTAATCTAGTCTATTGCTGAGATGTACATATTTTATAGATAGCACCTTACTTTACTATTGTGGATGCTCTAAGCAAGCTATATGCTTATATGGAAGAGAGAGATAAGAAAAAGTGGGTAGTGTTGGCTCTCATACAAGAGCTAGCTCCACACAACCTCTAAGAAATATGCATTAAATTTATAGAGTGAGAAAGAGAGAGAATGGAAAAAATAAAGTTAACCTGCTGACTCATTATACAAGTTAAGTCTAACATTGACTTATAATAACAGTAAGCTTTACTATTAAACTTGTTCTAAGCGGCGAGCCAACCAACCAGAGCGCGACAAGACCACACAACACAAGCAAACACTGGAAGCGGGGTCACTGCTCATTCAGATAGGTTCAAAGATTTCCAGAGAAGCTTGACCAAAACTTTTCCCGGAGTATGGGCGCCGCTCCCACCGGCCACCACGCATGGCGCGCCACGGAAGCCCCGCTCGAGCGGACCATCCCCACGCGGCGCCCATGCGCCTCACCCGCGCGTCGTCGCGGCGTCACGTAGCGCAGGCAAGCCAGTTCGCCGCGGATTGTCGTGAGGGCTTCTTTTTGACCTCGTTCCCTACCTCCATCCATCCACGCACGCCGCCCCCCACATTGGGAGAGACAAAAGGCGGGACGCTGATCGAGCTTCTTCTCGGGATTTTAGGGTATGTTCTTGCTGTGTTTTCCCTCCCCTGTATTCGTGATAACGGTGCGTTCTTGAGGCTACTTCGGTTTGCGCTCCACGTGTTCGGTGAAATGCCTGTGAGAGAGGAGGAAGATTCAGTACTCATGCCTCTCCTACTCTCTTCTTTTATTCTGTTGTTGTTTTGATAATTTGTCTGGTCTTCTTGATTATTTTGTTAGATTGCAGATGCAAAACGGCCGCAGGTCTGTGATTGTACCAGCCCAAATATTGCATTCCTAGTTTCTCTTAACAAATGCCACTCGAATGTGATGCCAAAGAGCCAATATTGACAACAAATTAATGTTGGCTCTTGCCTTGTGCACCACAGCAATGAATGAATGACAGTTGTATAATAGTTTGTGAGCCATATGACCAAATGAAGATTATAGTCATAGACATGTAGGCAATCCATCTCTCTTGATACCGTAGTGTGGATGTATGCTGAGTTGCTGACATGTCCATGTTTTGTTAGGAAGGTAAAACAACACGAGTGATGCTCTTTGTCATTTTCATCCTGGAACACATATGGAGGACTATTTTTCACGCATCCTAGACCTTGCTTGGCAGTTACGACATCAACTGACACGATTAATAGGTACCAAGCATATAGTGCCCTTGTTGATTATAATAAAGCAGAATATAGCCTGCTAATGTTTCATTCTATATTGCTGTATTTTCTCTGCGGAAAGGCTAAAAAACTGTCGACACATTTTTCTTTAGAAATATATCGATTTCTGATCCATTAGATCAACTGTAAGATTCGTGCTATTTTGGTTGACGAAAATAAAATTGTACTGCAAAGAATCGAACCTAGGATTTCCGGTGGCTTGTCCAGCGGCCTTGACCAACTGATCGAGCAAAGATTTTGGCTTGAATTGAAATTACATACTAATTACACTTAAATTACATACTATTTTCATATATAATTTAGAGACTTACATTGTAAATACACTAAAATTACATATGTAATTTAGAGACTTACATATGTAATTTTAGGACTTACATTGTAAATACACTAAAATTACATATGTAATTTATGGGCTTACAATGTAAATACATGCCAACTATTTTTTGGTGAAAAATATGGTGCCATAAATATAGCTACTCCCTTTTCTCTGTGCTAATTCCGAATTACCAGCTCCCTGTAAATAATGGACACTTTCCTTTTTAGTTTACACATAGAGAATTTGTTGGAAATTTGATTAGTTCGTTAGCTACTAGATATGGATTTAGGATGGGCAACCAGTTATGATGAACTTGATTGGCTCTATAAGAAACACACTCTCAATATGAAATTTGCATATACTTATTCGGTTATTCCTCTTGAGTTTTCTTTATATTTTTTTTACATGCTGATACTTTTTTTTTTCCATGCCAGAACATGTGTTTGGGTATATTGATTGGATCCCAGAACATCATGGATTCCAGTTCTCTCCTTGTTATAAAAGATCATTACCTGCCACCGAAAGATACATCCGTGGAGAGGCTCCCTTGCTGTCTGTCAGTAATTCTACAGAAGACCAGACCCCAAATGGACTATCTGAAGCCATTGTTGTCAGAAAAGGCTTGTCCAGTATTTGTCAAAGGTTTAGTTTTTCTTTCTAACTTCCTAATCAGAACGTTAATAATATACATAATTATTTTTATTCACATTGCAACTATTTGTTCTGTCTGATCATATGGCAGGTTTCCCAGTTTTTTGCATGACTTCAGATTGGGACAACAGTTGGCATTCCATTTGCGAGAACTGTGCAGTGCTGTTGCAAGTGAAATTCATGCTAAACTAGCTAGGTTAGTTGCTGTCTTCAAATTTCCAACTTTTATGTGTTGCATCCGTTCTAGTCCATGTGATGAATTTCTGTTTGCTTGAGCCAGGTGCTAAAAAACTGCTATATGCTTGCAGGTTCTTACATCGTTTCTGGACAACATTACAGGGATCTTCTAAAGATATAGGATGGCTAAAAAGAACAAAAACATTGCCTTGTTCAGTTGATGGTACAGATCGTTTCAAGGAGCTTTTGTATGGCATCAGGTGATCTTTTGTTCATGCCTATTAAAGTACCACTGACTTTATTTGGAGAGTACTATCTTTTACGGACCCTACATGTAGAACTACTCCTATCTAACAACAATAGGGAATTGAGCCACTGAACATCATTTACGGAAGTAACAGATTTATTCCTGGTATCAATCCATATGGAGGTCCAACATTCAATTATTATCAGTTCATGCAAAGACCAATGATACTAAAAGAAGCTTAATGTTTCAGAAATGGCATGCATCATCTTCCTAACACACTGGTTTACTTATTCATCCCTGGTGAGACATTTTTTTTCATTTTTTGCAAATGATGTTAAAATGCCTAGCTTTATATTGGTTCGCTGCCCTTGTGCAGGACTTTTTAGTAATCACAGTCCACTTTACTTCGTCAATACGAAAAGAATCTTTTCGAAGATGGGGCTTACTTGCCATATTGCAAGGATTCATAGTGAGGTAACAGAGCTCAACAGGGGTACATGCAAACAATTTTCTCATGTTTACCAAGCTCTAGATTGTAGCATTTCTTCTGTTTGTCCCTGTACTCACCTTTCATTTCGCCCAGGCATCAGTGGAGAAAAATGCACGGGAACTGAAATTATACATTGAAGAGCTGTACTGGGGTTCTGGTAAACAGGTGTTGCTCCTGGGCCATAGCAAAGGTGGAGTTGATGCGGCTGCGGCGCTTTCGTTGTACTGGTCTGAACTCAAGGGCAAGGTTGCCGGACTGGCATTGGTTCAGAGCCCATATGGTGGCACCCCAATAGCTTCCGACATCCTTCGCAAAGGCCAGATTGCTGATAAGGAGACAAGGAGGATCATGGAACTGATAATATGCAAACTCATCAAGGTCCTCATTATCCTGGTCTCTGTGTTACCTAATCAGATCAAACCTTTATGACTGAGTTATTAGGCAAATCTTTCAAAAAAAGGACTTTATGAATTGTTCATATATCACTGTTTTCTCATATTCTTGTGCATTTCATATCATGATCTTAACAAGTAAACAAATGCAGGGTGATATAAGGGCCTTGGAGGATCTCACATATGACAAGAGAAGGGACTTCATCTCCAAGCACAAGCTCCCCGTGGACGAACTGCCGATCATCTCCTTCCACACCGAGGCCAGCACCGCCCCGACGATGCTCGTGACATTGTCGCGCGTCGCCCAAGCCGAGCTCCTCCCATGGCTCCCATTGCCGCGGTTCCTGTCGTCATCGGAGTACGCCGAATCGTTGCTCGCCTCTCTGAAGCTCCCCGTGGTCGTGCCGGCCTCGGCGGCCATGGCCGTCAGCGCGCTCCACCTGAGGCTGCGCTACGGCGAGAGGAGCGACGGCCTGGTGACGCGGCGGGACGCCGAGGTGCCCGGGTCGGTGGTGGTGAGGCCGGAGAGGAGGCTGGACCATGCGTGGATGGTGCACTCCACGCTGAGAAAGGATCATGCCGAGGCTGATGCCACTCAGATGTGTGAAGCCCTGATGGCCATGCTCGTTGAGATTGGGAGGAAGAAATGCTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017586