BGIOSGA017596

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Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017596| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017596, complete gene.| tag = OsI_209...")
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Gene Name

BGIOSGA017596

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017596, complete gene.

LocusTag

OsI_20918

Ensembl Transcript ID

BGIOSGA017596-TA

Ensembl Protein ID

BGIOSGA017596-PA

Length

3404

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28869121..28872524

Sequence Coding Region

28871235..28872524,28870605..28871088,28869786..28870021,28869121..28869690

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28869121..28872524 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28869121..28872524 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCAGCCGACGTGCGTGCCCGTGAAAGCTTGTTCATCCCCATCGATCTGAACGAGAAATCATCTCACGAAAAGCAGGATGAGGAGGAGATTCATCTCCGTCAATTGGAGCAGCTGCTCGCGCCGTTCAATCCGTGGGAAGCGGGCGATCCGGAGCTGGAGGAGTGGCAATGTGCTCGACCCAAGACGAGACACCCCACGCCGCCGCCGCCGCCGCCGCGTCGTTGCCACCTGCTGTTCACGATGAAGCTCTCCGTCAAGAGAGGGCAGGCCATGTGGTCGCGCAAGGAGACCCCTCGCTTCTCCGCCGAGCGCGCCGGCGGATTCCCCCTCCGCCTCGCCCGCCTCGCCGCCGACGGGTCCCCTCGCCTGGAGCTGGAAGAGGACGGTGGCCGGGTGGGCGCGCTCTCCTGTTTCGAGTCCAGGCCATGGCCTTGGAGCAGGAGGGAGGAGGTCGTAGCCCTCGCCGCCGCTGATTCTGTGCCGGTGAGGGTTGTGGCCGTCATTAGGCGGTTTCCGGTCGCCGGAGGCGACCGTCTCGCCATCGTGTCCAACATGAGGATGGCAAGCCTTGTGGTGCGCCTCCATGACAAGCTCTTCGTCCTGCCCCCCGACGGCTCAACTGTCACCATTGCCTTCTGCGAGCGATGGTTCCGTGTCCCCTCCAATTGGACGGAGGAGAAGTTGTATGCTAGGGTCGGCCATGATTTCATCAACATTACGGCCGCATTGGAGGATCTGGCCAGGACTCTCTACCAGATGTATGAACAAGAGGAGCAAAAAAAGATGGTGCTTCAGGAGAAACAAGAGCAGGAGAAGAGGAAGCAAGAAGAGCTGAACAGGGAAAGGGAGGAGCTGGAGATGATGCCTCTTGCCTGCATCCCTCTAGGCCATGGGGAGATGCAGTGGGAATCGCCTTGTGAAGCGATGCACCGAAGGTTCAAACTATCAATGGGCACTGATGGGGAGGTTCGCTGCAACTTTGTGGAGCAGGAATGTCCTCGCGTCATGCGCCGGAGGCTTGCCTGCGATGGCAGGTTTATTCTGCCATTGACGACGATGAAGCTTCAAGTAGTAGGATTTGTGGAAGGCTATTCGGACCCAGAGACCATTGGCTTCACAAAACAAAGAAGCTATATAGAGACGTTGAGACCTGTGGCAATGGTATCGGTGTTGCCGCAAGAACACACACAGGTGGATCAGATTTTGAGTTTCAAGTTCCTAGTAGACAATGTACCAATACGGCTCAACGATGGCATCATTCTTACTGGGTGGAGTGGAATCACGGAAGCTTTGCCGGCTAAATGCCGCAATGACAGAAAGAGAAGACATGATTTGGGACTCAGTGCAATCTTTGCATTAGAAGCAGAGGAAATGCAGGGTCTTCTGTATCACCAAGAACAGCTAGAAAACCAGGACTTTAGGCTTAATGAGTTATCCCTTTCTGGGGAACCATCAGTGGGAGGGGAAGGAGAAGCTGAGTACAGCTTATTGTTTGAATCTCCTGGCGAATCTGATTGGGTGAAGGTTTCAGAACCATATGTACCAAAGTTTCCAACTGAAGAAGAAATTAGGAAGAGGGAGGAGTGCCGCAAGGAGCAGCTTAAGCTGGTCATGGCGCCGATCATACGGCCAGTGCAGGAACCGAGAAGGGGTATAAATTATTTCATGTCTGAGCCACGCAGCAGGAGCACCAGGGAAGCAGAGCTCCCAATGCATGAACCATACTCAGTGTTACTATACTACTGGACCTTGTCCGACAAATCAGAATCAAAGTTGAAACCTAAGAGGAAGGTGTATCCTAGACTTGTTTGTTTGGAGTGGTGTACTTGTTCACCCAGCAGCATGTTGCAAGTTTACGCCCTCGAGATCATTGTAGCTGATTCTCTTCATTCCTGCAAACTCGACATATCCGGTTTCGTTGCGATTAGGGACTTACGTGATGGACGGCGCAATTACATTTTCAACAGAGAAATGGACCACCCTTTCACTGTCGTATCACAACATGGTGTTTTGCAGCTGCCAACATTGAGCCCTCGGAGAGCCATTCATACCAATCCTAAAATCTTGCTCGAGTTCAACCTGAAGATGAAGAGAACAGGTAATGGCATTCACAGTTACCATGATCTGATCCAAGGAGTAGTAGAACATCCTAGTATATATCGGCGCGATTGGTCCAGAGTCAATGAGCTGTCCATTGTACCTTGTGGCAACAACTCTACTCCAATGATGCGCCTGAAGCTCGCCGTGATTTCGAAAGGCGTCGAGGCCACTGTTGAGCTCCAGCCGCTCAGGCTGCCTCCTGGAGGCATTGATTTGCGATGCACAGCTCGGTCAGGCCGTATAGCTGATGACATTGAGCTTTTTGATGGCAAATACGGTGGTGACGACACCTCCCTACAGTTTGTGGTGGCAACGGAGCTGCATGGCAACATGGAGATCCACTTGGAAGCAGTATGTAATGGTGTGAGCCAGAGATGGTGCATTGATTTTGTGCCAAAGTTCCATGCTTTGTTCTCTCAGGAGGTAGACTTCCAATTTGCTCAGCTCTTGCTAACTATTGCCTGGTCCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MEAADVRARESLFIPIDLNEKSSHEKQDEEEIHLRQLEQLLAPFNPWEAGDPELEEWQCARPKTRHPTPPPPPPRRCHLLFTMKLSVKRGQAMWSRKETPRFSAERAGGFPLRLARLAADGSPRLELEEDGGRVGALSCFESRPWPWSRREEVVALAAADSVPVRVVAVIRRFPVAGGDRLAIVSNMRMASLVVRLHDKLFVLPPDGSTVTIAFCERWFRVPSNWTEEKLYARVGHDFINITAALEDLARTLYQMYEQEEQKKMVLQEKQEQEKRKQEELNREREELEMMPLACIPLGHGEMQWESPCEAMHRRFKLSMGTDGEVRCNFVEQECPRVMRRRLACDGRFILPLTTMKLQVVGFVEGYSDPETIGFTKQRSYIETLRPVAMVSVLPQEHTQVDQILSFKFLVDNVPIRLNDGIILTGWSGITEALPAKCRNDRKRRHDLGLSAIFALEAEEMQGLLYHQEQLENQDFRLNELSLSGEPSVGGEGEAEYSLLFESPGESDWVKVSEPYVPKFPTEEEIRKREECRKEQLKLVMAPIIRPVQEPRRGINYFMSEPRSRSTREAELPMHEPYSVLLYYWTLSDKSESKLKPKRKVYPRLVCLEWCTCSPSSMLQVYALEIIVADSLHSCKLDISGFVAIRDLRDGRRNYIFNREMDHPFTVVSQHGVLQLPTLSPRRAIHTNPKILLEFNLKMKRTGNGIHSYHDLIQGVVEHPSIYRRDWSRVNELSIVPCGNNSTPMMRLKLAVISKGVEATVELQPLRLPPGGIDLRCTARSGRIADDIELFDGKYGGDDTSLQFVVATELHGNMEIHLEAVCNGVSQRWCIDFVPKFHALFSQEVDFQFAQLLLTIAWSM</aaseq>

Gene Sequence

<dnaseqindica>1..1290#1437..1920#2504..2739#2835..3404#ATGGAGGCAGCCGACGTGCGTGCCCGTGAAAGCTTGTTCATCCCCATCGATCTGAACGAGAAATCATCTCACGAAAAGCAGGATGAGGAGGAGATTCATCTCCGTCAATTGGAGCAGCTGCTCGCGCCGTTCAATCCGTGGGAAGCGGGCGATCCGGAGCTGGAGGAGTGGCAATGTGCTCGACCCAAGACGAGACACCCCACGCCGCCGCCGCCGCCGCCGCGTCGTTGCCACCTGCTGTTCACGATGAAGCTCTCCGTCAAGAGAGGGCAGGCCATGTGGTCGCGCAAGGAGACCCCTCGCTTCTCCGCCGAGCGCGCCGGCGGATTCCCCCTCCGCCTCGCCCGCCTCGCCGCCGACGGGTCCCCTCGCCTGGAGCTGGAAGAGGACGGTGGCCGGGTGGGCGCGCTCTCCTGTTTCGAGTCCAGGCCATGGCCTTGGAGCAGGAGGGAGGAGGTCGTAGCCCTCGCCGCCGCTGATTCTGTGCCGGTGAGGGTTGTGGCCGTCATTAGGCGGTTTCCGGTCGCCGGAGGCGACCGTCTCGCCATCGTGTCCAACATGAGGATGGCAAGCCTTGTGGTGCGCCTCCATGACAAGCTCTTCGTCCTGCCCCCCGACGGCTCAACTGTCACCATTGCCTTCTGCGAGCGATGGTTCCGTGTCCCCTCCAATTGGACGGAGGAGAAGTTGTATGCTAGGGTCGGCCATGATTTCATCAACATTACGGCCGCATTGGAGGATCTGGCCAGGACTCTCTACCAGATGTATGAACAAGAGGAGCAAAAAAAGATGGTGCTTCAGGAGAAACAAGAGCAGGAGAAGAGGAAGCAAGAAGAGCTGAACAGGGAAAGGGAGGAGCTGGAGATGATGCCTCTTGCCTGCATCCCTCTAGGCCATGGGGAGATGCAGTGGGAATCGCCTTGTGAAGCGATGCACCGAAGGTTCAAACTATCAATGGGCACTGATGGGGAGGTTCGCTGCAACTTTGTGGAGCAGGAATGTCCTCGCGTCATGCGCCGGAGGCTTGCCTGCGATGGCAGGTTTATTCTGCCATTGACGACGATGAAGCTTCAAGTAGTAGGATTTGTGGAAGGCTATTCGGACCCAGAGACCATTGGCTTCACAAAACAAAGAAGCTATATAGAGACGTTGAGACCTGTGGCAATGGTATCGGTGTTGCCGCAAGAACACACACAGGTGGATCAGATTTTGAGTTTCAAGTTCCTAGTAGACAATGTACCAATACGGCTCAACGATGGCATCATTCTTACTGGGTGGAGTGGAATCACGGTGGGCATCCATAGCGGAGATGATGGCGACAACTGCACATTCCTGCCCTGCACCTCAGCAGAGAGCTGGACACACCAAATTCTAGAATGGAGGGTCGATGATAACAACCCAATATCGTGTTCAAGTTTGCTTGTTCAGCTCAATAGGAAGCTTTGCCGGCTAAATGCCGCAATGACAGAAAGAGAAGACATGATTTGGGACTCAGTGCAATCTTTGCATTAGAAGCAGAGGAAATGCAGGGTCTTCTGTATCACCAAGAACAGCTAGAAAACCAGGACTTTAGGCTTAATGAGTTATCCCTTTCTGGGGAACCATCAGTGGGAGGGGAAGGAGAAGCTGAGTACAGCTTATTGTTTGAATCTCCTGGCGAATCTGATTGGGTGAAGGTTTCAGAACCATATGTACCAAAGTTTCCAACTGAAGAAGAAATTAGGAAGAGGGAGGAGTGCCGCAAGGAGCAGCTTAAGCTGGTCATGGCGCCGATCATACGGCCAGTGCAGGAACCGAGAAGGGGTATAAATTATTTCATGTCTGAGCCACGCAGCAGGAGCACCAGGGAAGCAGAGCTCCCAATGCATGAACCATACTCAGTGTTACTATACTACTGGACCTTGTCCGACAAATCAGAATGTAAGTACACATCTATATTCATCTGAATTGCATTTCCATGAGCACTAATATTTACACATATTTGCTGATTTGTTGTTATACTGGGTAAAAAAATGGTCATCAGTAGGACCAATACATATTGGTACTGAAATTAACTAGCATGATAGAGTGCTTACATAGAAAATTCCTACCAATTCATGTAACATAGATAAAAAGACAACATATCTTAATCAGCAGTAGTCGCTGGTTTACTAAGTGGACAGGCAACTTTCTTTTGTCTTCATTGCAAGTAATAATTGCCACTGTGCGAACATTGATGTAGATAGGGGAGAAAGACTTATATTTTAGCACTCAAAAAATGAAACGGGCACTTTTCCTTAACCATCTCTCCGTGTATTTTATAACTTGAGGAATTCAGTTACTGCTTGGGGGCTTCGCTAAGGAGCCTTAACTTTGCAGTTCAAATAACTAAACAGATGCACGTGTGTAAGACTTCTTCTCCAAATCATGCATTCTTTTCTCTAAGACAAAGTTCTGGATACTAGTTATTGTTTGCTTTGGCCCGATTTGTAATCCAGGCTATTAAGTAACTCTTTGAATCCAGCAAAGTTGAAACCTAAGAGGAAGGTGTATCCTAGACTTGTTTGTTTGGAGTGGTGTACTTGTTCACCCAGCAGCATGTTGCAAGTTTACGCCCTCGAGATCATTGTAGCTGATTCTCTTCATTCCTGCAAACTCGACATATCCGGTTTCGTTGCGATTAGGGACTTACGTGATGGACGGCGCAATTACATTTTCAACAGAGAAATGGACCACCCTTTCACTGTCGTATCACAACATGTATGCACTCCATCTCTTCCACATATCTTTTCACAACTTATTCTCTAAGCGGAAATGATGAAAGCTCTATATGGGCATATTGCTTTACTCTGCAGGGTGTTTTGCAGCTGCCAACATTGAGCCCTCGGAGAGCCATTCATACCAATCCTAAAATCTTGCTCGAGTTCAACCTGAAGATGAAGAGAACAGGTAATGGCATTCACAGTTACCATGATCTGATCCAAGGAGTAGTAGAACATCCTAGTATATATCGGCGCGATTGGTCCAGAGTCAATGAGCTGTCCATTGTACCTTGTGGCAACAACTCTACTCCAATGATGCGCCTGAAGCTCGCCGTGATTTCGAAAGGCGTCGAGGCCACTGTTGAGCTCCAGCCGCTCAGGCTGCCTCCTGGAGGCATTGATTTGCGATGCACAGCTCGGTCAGGCCGTATAGCTGATGACATTGAGCTTTTTGATGGCAAATACGGTGGTGACGACACCTCCCTACAGTTTGTGGTGGCAACGGAGCTGCATGGCAACATGGAGATCCACTTGGAAGCAGTATGTAATGGTGTGAGCCAGAGATGGTGCATTGATTTTGTGCCAAAGTTCCATGCTTTGTTCTCTCAGGAGGTAGACTTCCAATTTGCTCAGCTCTTGCTAACTATTGCCTGGTCCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017596