BGIOSGA017602

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Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017602| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017602, complete gene.| tag = P0478H0...")
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Gene Name

BGIOSGA017602

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017602, complete gene.

LocusTag

P0478H03.30-2

Ensembl Transcript ID

BGIOSGA017602-TA

Ensembl Protein ID

BGIOSGA017602-PA

Length

3146

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28794047..28797192

Sequence Coding Region

28796987..28797192,28796729..28796942,28796040..28796115,28795847..28795935,28795616..28795733
,28795426..28795529,28795191..28795349,28794830..28795054,28794447..28794758
,28794047..28794160

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28794047..28797192 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28794047..28797192 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACTCGCCGGGCCCTCTCCTCCCTCGTCCGCGCCGCCTCCAGGCTCCGCGGGGCCTCGCCCGCCCCGCGCCCGCGCGGGCCGCTCCACCGACCGTCGCCATCGGGGTACCTCTTCAACCGCGCCGCCGCGTACGCCACGGCCGCCAGCGGCGAAGGAGGCGGCGCCTCCCGCGCCCGCGACGGGGAAGGCCACGGGTGGAGGTGTGCCAGGTCATCGGCGCCGTCGTCGACGTGCGGTTTGACGAGGGGTTGCCTCCCATCCTCACGGCGCTCGAGGTGCTCGACCACAACATCCGCCTCAGTGCTCGAGGTGGCGCAGCACCTTGGCGAGAACATGGTGCGCACAATCGCTATGGACGGGACTGAGGGGCTTGTCCGCGGTCAGCGCGTCCTCAACACCGGCTCCCCAATCACTGTTCCTGTTGGCAGGGCCACGCTTGGACGTATCATGAATGTTATTGGTGAGCCAATTGATGAGAAGGGTGACATAACAACGAACCACTTCCTTCCCATCCATCGTGAGGCGCCTGCTTTTGTTGAGCAAGCCACAGAACAGCAAATTCTTGTTACTGGAATTAAGGTTGTGGATCTGCTTGCGCCCTACCAACGAGGTGGAAAGATCGGTCTTTTTGGTGGTGCAGGAGTCGGCAAAACTGTCCTTATTATGGAGTTGATCAACAATGTTGCTAAGGCCCATGGTGGTTTCTCTGTGTTTGCTGGTGTTGGTGAACGTACCCGTGAAGGTAATGATCTTTACAGGGAAATGATTGAAAGTGGTGTCATCAAGCTAGGTGACAAACAGAGTGAAAGCAAGTGTGCTCTTGTCTACGGGCAAATGAATGAGCCCCCGGGTGCTCGTGCTCGTGTTGGGTTGACCGGTTTGACTGTTGCGGAACATTTCCGTGATGCCGAAGGACAAGATGTGCTTTTGTTCATTGACAACATTTTCCGTTTCACTCAGGCGAACTCTGAGGTGTCTGCTCTTCTTGGACGTATTCCATCTGCTGTGGGATATCAACCAACTCTTGCTACTGATCTTGGAGGACTTCAAGAGCGAATTACAACTACAAAGAAGGGTTCCATTACATCTGTCCAAGCTATTTATGTGCCTGCTGATGACTTGACGGATCCTGCTCCTGCTACTACTTTTGCACATCTTGATGCTACTACTGTGTTGTCACGACAGATCTCTGAGCTTGGTATTTACCCTGCTGTCGATCCTCTGGACTCCACATCCAGAATGCTCTCCCCCCATGTGTTGGGTGAGGATCACTACAACACTGCTCGTGGTGTCCAAAAGGTTCTTCAGAACTACAAGAATCTTCAGGATATTATTGCAATTTTGGGTATGGACGAGCTCAGTGAAGATGACAAGTTGACCGTCGCTCGCGCAAGGAAGATCCAGCGTTTCTTGAGCCAGCCCTTCCATGTGGCTGAAGTTTTCACGGGTGCTCCTGGGAAGTACGTGGAACTGAAGGAGAGCGTCAACAGTTTCCAGGGTGTTTTGGATGGGAAATATGATGACCTTCCCGAGCAGTCATTCTACATGGTGGGAGGCATTGAGGAAGTCATTGCTAAAGCTGAGAAGATCGCCAAGGAGTCGGCTTCATAA</cdnaseq>

Protein Sequence

<aaseq>MATRRALSSLVRAASRLRGASPAPRPRGPLHRPSPSGYLFNRAAAYATAASGEGGGASRARDGEGHGWRCARSSAPSSTCGLTRGCLPSSRRSRCSTTTSASVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKESVNSFQGVLDGKYDDLPEQSFYMVGGIEEVIAKAEKIAKESAS</aaseq>

Gene Sequence

<dnaseqindica>1..206#251..464#1078..1153#1258..1346#1460..1577#1664..1767#1844..2002#2139..2363#2435..2746#3033..3146#ATGGCGACTCGCCGGGCCCTCTCCTCCCTCGTCCGCGCCGCCTCCAGGCTCCGCGGGGCCTCGCCCGCCCCGCGCCCGCGCGGGCCGCTCCACCGACCGTCGCCATCGGGGTACCTCTTCAACCGCGCCGCCGCGTACGCCACGGCCGCCAGCGGCGAAGGAGGCGGCGCCTCCCGCGCCCGCGACGGGGAAGGCCACGGGTGGAGGTAAGATCACCGACGAGTTCACCGGCGCCGGCGCCGTCGGGCAGGTGTGCCAGGTCATCGGCGCCGTCGTCGACGTGCGGTTTGACGAGGGGTTGCCTCCCATCCTCACGGCGCTCGAGGTGCTCGACCACAACATCCGCCTCAGTGCTCGAGGTGGCGCAGCACCTTGGCGAGAACATGGTGCGCACAATCGCTATGGACGGGACTGAGGGGCTTGTCCGCGGTCAGCGCGTCCTCAACACCGGCTCCCCAATCACTGTAATGCCCCCCCGCCCGTCTTCTCATCCTTGTTTGCGATCGTACATTTCATTTCGTGTTGTCTCCGACCAGATCTGACGAAATGTGGATCTACTGCTGTCAGATTTGATCTAGGTGTACAGTTCTGAGTGGCGAGCGATCGCCCTTCCATTTCGTTCATTTTATCGGTAGACTGTTGGCTGCTTTGTGGTGGTCTGTTCGTGCTAGTGAAGAAATTGACTTTTTTTCCCTATAAAGTGCTGCCTTTTGGTTTGTGGTGGTCATCTAGAGTCTATTAGAATTCATTATGTTCACCAGTGTTGCATTTCCGTATTGGCGTATTGTGAGGTTAACATGCATTGGTTGGTATAACTTTTCCACTGTTTGCTTGAATGAAAATTGTCGTCATAGTCTAGGAATCCATTCCAGTTTTTGTTTATTTAATACCCTTGCCAATTGTTTAGCATAAAATGGGCATTACTGAATTCAGAGAACTGCTGATGCATTCGTGTAAATTCTGATTATAATTAGAGTTGCTGAACCTTGTATCTGTAGCATTGTCTTGGAAGTTGAAACTAATCATATATAATGTGTTCTACTATGTTTTTGACTTGGAAGTTATTCTTCTTTGTAGGTTCCTGTTGGCAGGGCCACGCTTGGACGTATCATGAATGTTATTGGTGAGCCAATTGATGAGAAGGGTGACATAAGTAAGTTACTATATGTTCCATGTCTTCATTATTCATAGTTATTTAAGAATTTGTGTGTCCAGTTCTTATTTATGTTTTGTTATTGATGCTGACTTCTATTGTAGCAACGAACCACTTCCTTCCCATCCATCGTGAGGCGCCTGCTTTTGTTGAGCAAGCCACAGAACAGCAAATTCTTGTTACTGGAATTAAGGTATAATTGTCCCACCCTTCTCTGATCCTGTGGTTATCTGAAGTATTTGAATGGTAAATAGTTGCAACCATGATTTAGAGTCCTAATTGCTGTACATTGGTTTAATTTTATAGGTTGTGGATCTGCTTGCGCCCTACCAACGAGGTGGAAAGATCGGTCTTTTTGGTGGTGCAGGAGTCGGCAAAACTGTCCTTATTATGGAGTTGATCAACAATGTTGCTAAGGCCCATGGTATGCATCTATACATAGTCTCATGTGTGATATTGTTCAAATTTCAGTCACTTGTTCTATTTGACTGATGATGATTTGTTTGCCAGGTGGTTTCTCTGTGTTTGCTGGTGTTGGTGAACGTACCCGTGAAGGTAATGATCTTTACAGGGAAATGATTGAAAGTGGTGTCATCAAGCTAGGTGACAAACAGGTAATTTTAGTTGATATCTTATTTTCTGTGGGACGCACACATGTGCAAGCTACTTATATATCAATTTTGGTTGCAGAGTGAAAGCAAGTGTGCTCTTGTCTACGGGCAAATGAATGAGCCCCCGGGTGCTCGTGCTCGTGTTGGGTTGACCGGTTTGACTGTTGCGGAACATTTCCGTGATGCCGAAGGACAAGATGTGCTTTTGTTCATTGACAACATTTTCCGTTTCACTCAGGTAATTTATGCAAGACATCTCTTCTTTTGGTATTTCTACTCTGCATAAAAAAGAATTACTAGTAGTATACGTAGCCTAGGTGTTTCTACTAAGTCCCATTGTTATGGTTTTGATTAATCTTGAATCTTGATGTCAGGCGAACTCTGAGGTGTCTGCTCTTCTTGGACGTATTCCATCTGCTGTGGGATATCAACCAACTCTTGCTACTGATCTTGGAGGACTTCAAGAGCGAATTACAACTACAAAGAAGGGTTCCATTACATCTGTCCAAGCTATTTATGTGCCTGCTGATGACTTGACGGATCCTGCTCCTGCTACTACTTTTGCACATCTTGATGCTACTACTGTGTTGTCACGACAGGTTTGTCCAACTGACCTAATACATCGTGTTAATAATGTCCTCATTATGACTTGAATTTGCTATCTGTGCAGATCTCTGAGCTTGGTATTTACCCTGCTGTCGATCCTCTGGACTCCACATCCAGAATGCTCTCCCCCCATGTGTTGGGTGAGGATCACTACAACACTGCTCGTGGTGTCCAAAAGGTTCTTCAGAACTACAAGAATCTTCAGGATATTATTGCAATTTTGGGTATGGACGAGCTCAGTGAAGATGACAAGTTGACCGTCGCTCGCGCAAGGAAGATCCAGCGTTTCTTGAGCCAGCCCTTCCATGTGGCTGAAGTTTTCACGGGTGCTCCTGGGAAGTACGTGGAACTGAAGGAGAGCGTCAACAGTTTCCAGGTCAGAATTGAATATGCATAGTAGTTTTTGGAGTTCAGTACCACTACGGTTACAGTATTTTGCAATTTTTGGGGTTATAATTGATGAATCAGTATGTGCCTGCAAGAATACACTAGTTTTACCAGACAGTACAATCCATCTACACTTTTTTAATCCTTTGTTCAGTAACACATTTTGCTAGATCTGTAGTTGTAGACACGCGATATTACAGAACTTCATTATGCTTATTAGTAATGTATATTCATGTTTGCTTGTGCTCTTTGCTAAAGTTTCTGCTGATGTGCAGGGTGTTTTGGATGGGAAATATGATGACCTTCCCGAGCAGTCATTCTACATGGTGGGAGGCATTGAGGAAGTCATTGCTAAAGCTGAGAAGATCGCCAAGGAGTCGGCTTCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017602

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017602&oldid=46358"