BGIOSGA017603

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Revision as of 02:21, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017603| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017603, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017603

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017603, complete gene.

LocusTag

OS05G0552900

Ensembl Transcript ID

BGIOSGA017603-TA

Ensembl Protein ID

BGIOSGA017603-PA

Length

3894

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28789106..28792999

Sequence Coding Region

28792961..28792999,28792662..28792868,28791784..28792032,28791471..28791680,28791235..28791399
,28790961..28791120,28790370..28790521,28790198..28790285,28790032..28790105
,28789865..28789939,28789579..28789780,28789106..28789482

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28789106..28792999 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28789106..28792999 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGACCATATGCGGATCCCTCATGCACGAGCTCCAGGTCATCTGGGACGAGGTCGGGGAGCCCGAGGCCGCGAGGGACAGGATGCTGCTGGAGCTCGAGCAGGAGTGCCTGGAGGTGTACAGGAGGAAGGTGGACCAGGCGAACCGCTCCCGCGCCCAGCTGCGGCAGGCGATCGCTCAATCTGAAGCTGAACTCGCCGCCATCTGCTCCGCCATGGGCGAGACGACGGTCCACGTCAGGCAGTCTAATCAGAAAGCATGTGGATTACGGGATGAGCTCGGTGCAATATTACCATACCTAGAAGAGATGAAGAGGAAGAAGGTTGAAAGATGGAACCAGTTTCTTGATGTCGTAGGAAGGATAAAGAAGATCTCATCTGAGATAAGGCCAGCAAATTTTGACTCTTTTAAAGTGTCTGTGGATCAATCTGATCTATCATTAAGAAAGCTTGAAGAGTTAAGGGTGGAGCTGAAGTCCCTTGAAAAGGAGAAGGGTGAGAGGGTAAAGCAAGTTATGGAATATTTGAAGACTTTACATTCTTTATGTGTAGTACTTGGTGTCGACTTCAAGAAAACAATATCTGAAATACACCCTAGTCTTGATGAAGCTGAAGGGCCAAGGAATATAAGCAACACTACAATTGAGATGCTAGCATTGGCGATTCAGAGACTTCGTGAAACAAAAATGCAGAGGATGCAGAAGCTCTGCCAGCTTCAAGATCTTGCATCTACCTTGCTAGAACTATGGAATCTAATGGATACGCCATTTGAAGAGCAGCAGGCATACCAGAATATAACATGTAATATTGCTGCTTCAGAGGCTGAATTAACAGAACAGAACACCCTTTCCATTGAGTTCCTCAACTATGTGGAAGCTGAGGTATTAAGGCTTGAACAGCACAAAGCAAGCAAAATGAAGGAGCTTGTTCTCAAGAAGAAAACAGAACTAGAAGAACATCGACGACGGGCACATTTAGTTGGAGAGGAAGGTTATGCAACTCAGTTCACAATTGAGGCCATTGAAGCAGGGGCTATTGATCCCTCTTTGTTGCTCGAGCAAATTGAGGCTTATATTTCAACAGTGAAAGAGGAAGCTTTTAGCAGGAAGGACATTCTCGAGCGAGTTGAGAAGTGGCTAAATGCACGTGAGGAAGAGGCTTGGCTGGAAGATTACAACAAAGATGACAACCGGTATAATGCTGGGAGAGGTGCACACATTATGCTTAAGAGGGCTGAAAAAGCGCGTGTTCTGGTTAGCAAGATTCCAGGAATGGTAGATGTTCTTGAAACAAAAACCAGAGCTTGGGAAACTGAAAGAGGCAATAAGTTCACATATGATGGCGTCCGACTTATATTGATGCTTGAAGAATACATGGTTGTTCGTCAAGAGAAAGAGCAGGAAAGGAAGAGGCAAAGGGATCAAAAGAAGCTTCAAGATCAACGCAAAGCTGAGCAGGAGGCACTTTATGGATCAAAGCCAACCTCTTCAAAATCTCGCAGCACTAAGAAGGTACCCAGAAACTCCACACCTGGAGTTCAACCTCCTAAATCAGAGATACTTCATTCAAAGACTATTCGTGCAACCAAGAAAACGGAAGATATCAACACTCCTTCCCCTGGTCATAAAGGTTTAGACACTGTTGGTCTCCCTATCAGGAAGTTATTTCCATCTTCCAACTCGAGCACTCTTCTTGAGATGGAGACACCCCGGAAGCCCTTCTCTCAGATTACACCTGGAAACATATCCTCAGCTCCTGTGCGTCCAATCTCCACTGGTGGTACTGAAGAGAACAGGACTCCCAAGACATTTGCACCAGTTCCTACGACTCCGATGACAGTGAGCCCTCATATGCAAATGGCAGTGACGCCTGTTCTTACCGCAAAAGCTGTTTCTGTACTCTCTTATGACGAACCGGAGCTGACTTCACAAGAGGACACCGAGTACTCATTTGAAGAGAAGCGTCTTGCAGTCTATCTTGCCGCACAAGTGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MKTICGSLMHELQVIWDEVGEPEAARDRMLLELEQECLEVYRRKVDQANRSRAQLRQAIAQSEAELAAICSAMGETTVHVRQSNQKACGLRDELGAILPYLEEMKRKKVERWNQFLDVVGRIKKISSEIRPANFDSFKVSVDQSDLSLRKLEELRVELKSLEKEKGERVKQVMEYLKTLHSLCVVLGVDFKKTISEIHPSLDEAEGPRNISNTTIEMLALAIQRLRETKMQRMQKLCQLQDLASTLLELWNLMDTPFEEQQAYQNITCNIAASEAELTEQNTLSIEFLNYVEAEVLRLEQHKASKMKELVLKKKTELEEHRRRAHLVGEEGYATQFTIEAIEAGAIDPSLLLEQIEAYISTVKEEAFSRKDILERVEKWLNAREEEAWLEDYNKDDNRYNAGRGAHIMLKRAEKARVLVSKIPGMVDVLETKTRAWETERGNKFTYDGVRLILMLEEYMVVRQEKEQERKRQRDQKKLQDQRKAEQEALYGSKPTSSKSRSTKKVPRNSTPGVQPPKSEILHSKTIRATKKTEDINTPSPGHKGLDTVGLPIRKLFPSSNSSTLLEMETPRKPFSQITPGNISSAPVRPISTGGTEENRTPKTFAPVPTTPMTVSPHMQMAVTPVLTAKAVSVLSYDEPELTSQEDTEYSFEEKRLAVYLAAQVA</aaseq>

Gene Sequence

<dnaseqindica>1..39#132..338#968..1216#1320..1529#1601..1765#1880..2039#2479..2630#2715..2802#2895..2968#3061..3135#3220..3421#3518..3894#ATGAAGACCATATGCGGATCCCTCATGCACGAGCTCCAGGTGCGCCTCGCTGTCGACTGATCTGCTGTTGCCGCGATGGCGGTGACAGGTTTTGTTGGTCTCTCGCTGATTCAGATCGCTCGTGGTTGCAGGTCATCTGGGACGAGGTCGGGGAGCCCGAGGCCGCGAGGGACAGGATGCTGCTGGAGCTCGAGCAGGAGTGCCTGGAGGTGTACAGGAGGAAGGTGGACCAGGCGAACCGCTCCCGCGCCCAGCTGCGGCAGGCGATCGCTCAATCTGAAGCTGAACTCGCCGCCATCTGCTCCGCCATGGGCGAGACGACGGTCCACGTCAGGCAGGTCTGTCACTTTTGCTTCTGTTTCTGTCGTTTAAGAGCTTATGTTTTGATGGTTGATACGATTTACTGTGTTATGGTACTATAATGGTTTGGGGCGCATCAGAATTTAGCCGTTTCTCCGATTCAAAAACACTACCCACCATTGTATTGTGATATTATCGAAGTATTATTAGGCTATGAATTCATATGTTCTTCGTATACTACCTTTCGCCTGTATTCAAGCATGGTAACTTCATCATTTTCCGTTAGCATATTTTCCGAACTGGTAAGCAGTGTGTGTTTTGCAAAAACTTTTTGCATACAAATTTATTCTAAAAAACAAATAAACCCAATTTTTGAGTTTATAATAATTAATTCTTAATTAATCATGCACTAATGACTTATATTGTTGTGTGTGCCACGGAGTTGCCACACCCAATAGCCGGAAGGAGCACAACCCTCTAGATTATATCCCATCTGGTACTGGTTGCTATATCTTGAGACGGAGGTAGTATATGATTACAGTCACAGATGGGCTCATTTAATGTGTATTATTTAGTTATCCAACTTGAAAGGTAGAAATATGCTGTAGCGAAATAGGATCTACCAGTAAGGCAGTAATTAGTTCTTTGTTTTTGATTGTTTTATCAGTCTAATCAGAAAGCATGTGGATTACGGGATGAGCTCGGTGCAATATTACCATACCTAGAAGAGATGAAGAGGAAGAAGGTTGAAAGATGGAACCAGTTTCTTGATGTCGTAGGAAGGATAAAGAAGATCTCATCTGAGATAAGGCCAGCAAATTTTGACTCTTTTAAAGTGTCTGTGGATCAATCTGATCTATCATTAAGAAAGCTTGAAGAGTTAAGGGTGGAGCTGAAGTCCCTTGAAAAGGAGAAGGTTCTTCTTGAAGCCTTTAGCTCTATGTATTATTTGAATTCCTTTTCAATTTCTATTTTCTAATGTATTCTGATTCAGTTATTAAATTTCTGAATTCTGATAGGGTGAGAGGGTAAAGCAAGTTATGGAATATTTGAAGACTTTACATTCTTTATGTGTAGTACTTGGTGTCGACTTCAAGAAAACAATATCTGAAATACACCCTAGTCTTGATGAAGCTGAAGGGCCAAGGAATATAAGCAACACTACAATTGAGATGCTAGCATTGGCGATTCAGAGACTTCGTGAAACAAAAATGCAGAGGATGCAGAAGGTCTGCATCTTACTATTTCAATTCAGGGAATGGCCAAATGGTATATATCTGCTTTCAACTAACTGTATTAGCTCTGCCAGCTTCAAGATCTTGCATCTACCTTGCTAGAACTATGGAATCTAATGGATACGCCATTTGAAGAGCAGCAGGCATACCAGAATATAACATGTAATATTGCTGCTTCAGAGGCTGAATTAACAGAACAGAACACCCTTTCCATTGAGTTCCTCAACTATGTGAGTTAATGATCTTTTGGAGAACTTGCTTTCGTGAGTCTTGTGGTTGTCATTTTCTGTTTTCTACTGAGATAATGATACTAGAGTCAGAGGACATGATATTCTTTGATCCAGGTGGAAGCTGAGGTATTAAGGCTTGAACAGCACAAAGCAAGCAAAATGAAGGAGCTTGTTCTCAAGAAGAAAACAGAACTAGAAGAACATCGACGACGGGCACATTTAGTTGGAGAGGAAGGTTATGCAACTCAGTTCACAATTGAGGCCATTGAAGCAGGTAATATGTTATGGAATGATTCCCTGGGTGTGTTCGCTTTTCCTAGATCCCAACCGGATCCCTCTGCACGGAAAATGGAGTGGTTCATTAGCGCGTGATTAATTAAGTATTAGCTATTTTTTTAAAAAAAATGGATTAATTTGATTTTTTAAGCAACTTTCATATAGAACCTTTTTTTTTGCAAAAAACGTACCGTTTAGCAGTTTGAAAAGCGTGCGCGCGGAAAACGAGAGAGAGAGGAGTTGGGAAAAGGGGCATCCGAACACACCCTTAGATTTCTGTGCAAGTTCTTGAAGGTAGTTTCAGTTAATTGATCCTCCTACCTCCTTTGCTCATGCATTCCGTTGAGAGGATGTGTCATGTGTGTTAAGCTGTTAATGCTGTTTATTTAGTAAAATGTTTTATTGCCCAAAATATGTCTTCACTCTTTCCATTTCAGGGGCTATTGATCCCTCTTTGTTGCTCGAGCAAATTGAGGCTTATATTTCAACAGTGAAAGAGGAAGCTTTTAGCAGGAAGGACATTCTCGAGCGAGTTGAGAAGTGGCTAAATGCACGTGAGGAAGAGGCTTGGCTGGAAGATTACAACAAAGTACTGTCCTATCAGAACAATTTATATGAAAAGATTTTTTTTCCGCACCTGCTGCTGATTGCGGTGTCCGCATGACATGATCAGGATGACAACCGGTATAATGCTGGGAGAGGTGCACACATTATGCTTAAGAGGGCTGAAAAAGCGCGTGTTCTGGTTAGCAAGATTCCAGGTGACAATCAATTATTAAACACAATGTTATGCTTTCATTCTTAATTTCTTATCATTTCTGCTCCTGATTTGCTGCTATTGTGTTGTGGACAGGAATGGTAGATGTTCTTGAAACAAAAACCAGAGCTTGGGAAACTGAAAGAGGCAATAAGTTCACATATGATGGCGTATATTTCTCTATTCATGCCGTTTATTTTATGTATTATTTACAAAGCCAGTTTTGAGAATTGCCAAAACTCGTGTCGTACAATGTTTGCAGGTCCGACTTATATTGATGCTTGAAGAATACATGGTTGTTCGTCAAGAGAAAGAGCAGGAAAGGAAGAGGCAAAGGGTACTAGCTGTATCCTAATTTGTGTGCTTTTGTTACCATCTTACGTGGTAACGTGGGTGAGATCTGAAATCTGAGTAATTGTAGGATCAAAAGAAGCTTCAAGATCAACGCAAAGCTGAGCAGGAGGCACTTTATGGATCAAAGCCAACCTCTTCAAAATCTCGCAGCACTAAGAAGGTACCCAGAAACTCCACACCTGGAGTTCAACCTCCTAAATCAGAGATACTTCATTCAAAGACTATTCGTGCAACCAAGAAAACGGAAGATATCAACACTCCTTCCCCTGGTAACTTCGACTTAAATATATCTGAAGCAATATTTCTAAATTTTTACTTAGTATGTAGTACGATCTGACTATCTCTGATCTCAAAAATAAACTCAGGTCATAAAGGTTTAGACACTGTTGGTCTCCCTATCAGGAAGTTATTTCCATCTTCCAACTCGAGCACTCTTCTTGAGATGGAGACACCCCGGAAGCCCTTCTCTCAGATTACACCTGGAAACATATCCTCAGCTCCTGTGCGTCCAATCTCCACTGGTGGTACTGAAGAGAACAGGACTCCCAAGACATTTGCACCAGTTCCTACGACTCCGATGACAGTGAGCCCTCATATGCAAATGGCAGTGACGCCTGTTCTTACCGCAAAAGCTGTTTCTGTACTCTCTTATGACGAACCGGAGCTGACTTCACAAGAGGACACCGAGTACTCATTTGAAGAGAAGCGTCTTGCAGTCTATCTTGCCGCACAAGTGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017603

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