Os11g0641800

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0641800| Description = Cupredoxin domain containing protein| Version = NM_001074886.1 GI:115486420 GeneID:4351006| Length = 2367 bp| Defin...")
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Gene Name

Os11g0641800

Description

Cupredoxin domain containing protein

Version

NM_001074886.1 GI:115486420 GeneID:4351006

Length

2367 bp

Definition

Oryza sativa Japonica Group Os11g0641800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27275052..27277418

Sequence Coding Region

27275098..27275608,27275742..27276857,27276998..27277137

Expression

GEO Profiles:Os11g0641800

Genome Context

<gbrowseImage1> name=NC_008404:27275052..27277418 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27275052..27277418 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cagctaatagctgatcagaccaccatggtggcctctctcctttgcaccgtcgccgttgcggttctcgccgtggcagcggtcggcggcgaggcgggggtggtggagcacaccttcgtggtgcacgagatgaacgtgacgcacttgtgcaacacgaccaagatctttgtggtgaatgggcagttaccgggcccgacggtggacgtgacagagggtgacacagtggtcatccacgtcgtcaacaaaataccacatgggcttaccatccactggcacggtgttcgccaattgaggagctgctgggccgatggggcaggcttcatcaccgagtgccccatcccgcctggcagtgagcgcacctaccgcttcaatgttaccgaccaagtcggcacgctgtggtggcacgcccacgtcacctgcctccgctccaccatcaacggcgcattcatcatccgtccccgcgatgggaagtaccccttcccgacacccgtcaaggatgtaccgatcatcataggtgaatggtgggagctcgacctcgttgagctggacaggaggatgagggatggcaacttcgacgacaacccgttgtcggctacgatcaacgggaagcttggcgaccttagcaactgctccggcatagtggaggagagctttgttctcaacgtgaagcatggggagagctaccttctccgggtcatcaacactgcattcttctccgaatactatttcaaggtcgccggccacacgttcacggtggttggcgctgatggcaactacctgacgccgttcaagacagacatggtcaccgttgcccccggcgaggccattgacgtgctcatggtcgccgacgccccaccagcccactatcacatgatcgcgttggctaaccaaccaccggagccagacccacagatcccgaagtacatctctcgtggcctcgtccgctacaccggtgtcgatgccaacaacaatggcctaccggtcccaatgccgatcatgcctaaccaacacaacaccatgccatcctactacttccatgccaatcttactggcctcatgcatccgaagcatcgtcgtgtgcccatgcacgtcgacgagcgtatcttcatcatccttgggcttggtaccatctgtcgtggtcggaacaccacctgcaagcggcagcgcagcctggagaccatcgaggtggccaccatgaacaatgtctccttcacccacccaaacaccactgcgctcctcgagcgctactacgacggcactccagaaggcgtttacacggaggacttccccgttcggccaccacggccatacaactacaccaaccctgctctcatccctcctggccctctcgaagaggtgctggagccaacattcaaggcgaccaagctgaaacggttcaagtataacacatcagtggagatcatcttccaaagcagcacgttgttgatgagtgactccaaccccatgcacctccatggctatgacgtcttcctccttgcgcaggggcttggcagcttcaacgccaagagggacatcaggaagttcaactaccacaaccctcagctcaggaacaccatattggttccccgcggtggttgggccgccgtccgcttcatcacagacaatccagggatgtggtacttgcactgtcactttgagttccacatcattatgggcatggcgacggcgttcatcgtggaggatgggccaacaccggagacgagcctgcctccaccgccgccggagttcaagagatgtgatgcctcttga</cdnaseq>

Protein Sequence

<aaseq>QLIADQTTMVASLLCTVAVAVLAVAAVGGEAGVVEHTFVVHEMN VTHLCNTTKIFVVNGQLPGPTVDVTEGDTVVIHVVNKIPHGLTIHWHGVRQLRSCWAD GAGFITECPIPPGSERTYRFNVTDQVGTLWWHAHVTCLRSTINGAFIIRPRDGKYPFP TPVKDVPIIIGEWWELDLVELDRRMRDGNFDDNPLSATINGKLGDLSNCSGIVEESFV LNVKHGESYLLRVINTAFFSEYYFKVAGHTFTVVGADGNYLTPFKTDMVTVAPGEAID VLMVADAPPAHYHMIALANQPPEPDPQIPKYISRGLVRYTGVDANNNGLPVPMPIMPN QHNTMPSYYFHANLTGLMHPKHRRVPMHVDERIFIILGLGTICRGRNTTCKRQRSLET IEVATMNNVSFTHPNTTALLERYYDGTPEGVYTEDFPVRPPRPYNYTNPALIPPGPLE EVLEPTFKATKLKRFKYNTSVEIIFQSSTLLMSDSNPMHLHGYDVFLLAQGLGSFNAK RDIRKFNYHNPQLRNTILVPRGGWAAVRFITDNPGMWYLHCHFEFHIIMGMATAFIVE DGPTPETSLPPPPPEFKRCDAS</aaseq>

Gene Sequence

<dnaseqindica>47..557#691..1806#1947..2086#atggcttcatcagaaaatccatgaagataattgagcttggttctaacagctaatagctgatcagaccaccatggtggcctctctcctttgcaccgtcgccgttgcggttctcgccgtggcagcggtcggcggcgaggcgggggtggtggagcacaccttcgtggtgcacgagatgaacgtgacgcacttgtgcaacacgaccaagatctttgtggtgaatgggcagttaccgggcccgacggtggacgtgacagagggtgacacagtggtcatccacgtcgtcaacaaaataccacatgggcttaccatccactggcacggtgttcgccaattgaggagctgctgggccgatggggcaggcttcatcaccgagtgccccatcccgcctggcagtgagcgcacctaccgcttcaatgttaccgaccaagtcggcacgctgtggtggcacgcccacgtcacctgcctccgctccaccatcaacggcgcattcatcatccgtccccgcgatgggaagtaccccttcccgacacccgtcaaggatgtaccgatcatcataggtaacggacagtcctgattgaccgttgaagtatgcatcggtcaatcttgaaagttgattgatcaaacctgtttggttggatggatggcacaactttgtgaacctactgactaaggaataccatgttattgtaggtgaatggtgggagctcgacctcgttgagctggacaggaggatgagggatggcaacttcgacgacaacccgttgtcggctacgatcaacgggaagcttggcgaccttagcaactgctccggcatagtggaggagagctttgttctcaacgtgaagcatggggagagctaccttctccgggtcatcaacactgcattcttctccgaatactatttcaaggtcgccggccacacgttcacggtggttggcgctgatggcaactacctgacgccgttcaagacagacatggtcaccgttgcccccggcgaggccattgacgtgctcatggtcgccgacgccccaccagcccactatcacatgatcgcgttggctaaccaaccaccggagccagacccacagatcccgaagtacatctctcgtggcctcgtccgctacaccggtgtcgatgccaacaacaatggcctaccggtcccaatgccgatcatgcctaaccaacacaacaccatgccatcctactacttccatgccaatcttactggcctcatgcatccgaagcatcgtcgtgtgcccatgcacgtcgacgagcgtatcttcatcatccttgggcttggtaccatctgtcgtggtcggaacaccacctgcaagcggcagcgcagcctggagaccatcgaggtggccaccatgaacaatgtctccttcacccacccaaacaccactgcgctcctcgagcgctactacgacggcactccagaaggcgtttacacggaggacttccccgttcggccaccacggccatacaactacaccaaccctgctctcatccctcctggccctctcgaagaggtgctggagccaacattcaaggcgaccaagctgaaacggttcaagtataacacatcagtggagatcatcttccaaagcagcacgttgttgatgagtgactccaaccccatgcacctccatggctatgacgtcttcctccttgcgcaggggcttggcagcttcaacgccaagagggacatcaggaagttcaactaccacaaccctcagctcaggaacaccatattggttccccgcggtggttgggccgccgtccgcttcatcacagacaatccaggtaaacgttcaatggcatataaggaattcactattatgttatataacatgatattattttgtcgttttaagttggtaggtataagaattgggtgaaaagagtggctgatgtgtcattgtttgttttgttcttgttaacagggatgtggtacttgcactgtcactttgagttccacatcattatgggcatggcgacggcgttcatcgtggaggatgggccaacaccggagacgagcctgcctccaccgccgccggagttcaagagatgtgatgcctcttgaaacaacttatcctaacaactatggcaaggaccttcctcctctttgccagtattcactagataatggcattgcctttggggcattttattcttgtattgcattagttaagacgtacatgttaaattccagcgtgcacaagccggtccaggccatgtggtcatcagcttcaggccaaggtcacgaaaagcacaacttgatcatctgcatcttgttatgtactccctccgttttttgtttgatttttttttcttgtcaaacttctttaatttaaccaaatttat</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0641800, RefSeq:Os11g0641800