BGIOSGA017612

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Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017612| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017612, complete gene.| tag = P0560C0...")
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Gene Name

BGIOSGA017612

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017612, complete gene.

LocusTag

P0560C03.15

Ensembl Transcript ID

BGIOSGA017612-TA

Ensembl Protein ID

BGIOSGA017612-PA

Length

4236

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28726856..28731091

Sequence Coding Region

28730336..28731091,28729637..28730114,28729408..28729538,28728435..28728779,28728119..28728275
,28727749..28728041,28727574..28727633,28727028..28727117,28726856..28726951

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28726856..28731091 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28726856..28731091 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCTCCGAGCTCCCGCTCCACCACTCCTTCCGCCTCTCCTCCCGCCCCCACCTCCGCCTCCTCCCGCTCCGCCTCCTCTCCTCCCGCCACGCCTCTTCCTCCTCCTCCACCACCGCCGCCGCGTCCTCCTCCTCCTCCTCCTCCTCCTCCGGCGGCAACCGCGCCCCTCCGGCTCCAAATCCAACCCGAGGCGCGCCGTGGCTGCAGAAGTGGGGGCCCACCGACCCCGCCGCGCCGCCGCCACCACCTCTGGCTCCCTCCCCGACCTCCTCCATCGACCGAATCGTCCACCGCCTCCGCAACCTCGGCCTCGCCAGCGACGACGACGAGCCCGCCGCCGCCGCCGCCACGGCCACCGCGCCTCCCGACGGCAACGAGCGCCTCAGCGACCTGCTCGACCGCAGCTGGGCGCGCCCCGACCAGCAGTTCGCCGCCTCCAGCTTCGACGAGTCCGTCCTCCCCTGGGAGAGGGATGAGGTCGCGCGAGGAAGAGAGAACGAGGAGGACGGGGTGAAGAGGAGGAGGGTTAGGGCGCCCTCGCTGGCCGAGCTCACGATCGAGGACGAGGAGCTGCGTCGCCTCCGGCGGCTGGGGATGACTCTTCGGGACCGCATCACCGTGCCCAAGGCGGGCGTCACGCAAGCCGTCACGGAGAAGATCCACGACGCCTGGAGGAAATCAGAGTTGGTCCGGCTCAAGTTCCACGAGGACCTCGCGCACGACATGAAAACTGCTCATGAGCTAGTCGAGCGACGGACAGGAGGATTGATCATATGGAGGTCTGGGAGTGTTATGGTGGTTTACAGAGGGAGCAATTACAAAAGGCCTTTGAAATCTGAAACATTGGATGGTAACTCATCAGCGGTGAAAGGGGCAGACGGTACATTGTTCATCCCGGATGCATCAAGCCCCACAGAGCATGATAGCCAGGGGAAGGATGTAAACACCCAACGTGAGATTGCAGCCAGATTAAACATGCAGAATACTGAGGACATGACTGAAGAGGAGCTGGAGTTCAATCAAATGCTTGATGAGTTGGGCCCTCGTTTTGTGGATTGGTGGGGAACAGGCATTTTACCTGTGGATGCCGACTTGTTGCCTCAAACAATTCCTGGTTATAAAACACCATTTAGACTTCTTCCAACTGGAATGCGTTTGACCCTAACCAATGCAGAGCTGACTAATTTGCGGAAGTTAGCAAGGGATCTTCCATGCCATTTTGCTCTAGGGAGAAACCGGAATCATCAAGGCCTTGCAGCAGCTATTGTTAAGCTCTGGGAGAAGAGTTTGGTGGTGAAAATAGCTGTGAAACGTGGAATCCAGAATACAAACAACAAGCTAATGTCAGAAGAAATAAAGAATCTAACAGGGGGCACCTTGCTTCTTCGAAATAAGTACTACATTGTAATATATCGTGGAAAAGACTTCCTTCCAACATCTGTTGCAGCTGCTTTGGCTGAAAGAGAGGAGTTGACAAAAGATATCCAGAATGTAGAGGAGCAGAAAAGATGCATTCCGGTTGTGCACTCAATGGATGACAGTTTAGATGGGCATGCTCTTGCGGGTACTCTTGCTGAATTTCAGGAGGCTCAAGCTCGTTGGGGAAGGGAAGTAACTGCTAAGGAGCAAGAAGAAATGAAAGAAGCATCTTCTAGATCAGTGAAGGAAAAGCTTTTCAAGAGACTAGAGCACAAACTTTCCATTGCACAGGCAAAAATACATAGAGCAGAGCGGTTACTATCAAAGATAGAAGCTTCTATGGTCCTTGCTAATCCATCTGATGATAAAGAAATGATTACAGATGAGGAAAGATCTGTTTTCCGTAGAATCGGTTTGCGTCTTAAGGCATACTTGCCTGTTGGAATTCGTGGTGTCTTTGATGGCGTCATTGAAAATATGCACTTGCATTGGAAGCACAGGGAAGTTGTCAAATTGATAACAAAGCAGAAGACTCTGCCCTTTGTTGAGGAGACAGCACGGCTTCTAGAGTATGAGAGTGGCGGTATACTAGTCGCCATTGAAAGAGTTCCAAAGGGCTATGCACTTATATTTTACCGTGGAAAGAATTATAGGAGGCCTATTAACATAAGGCCTAGGAATCTTTTAACAAAAGCAAAGGCATTGAAGCGTGCTGTTGCAATGCAGCGTCATGAGGCCCTCAGTCAGCATATAGCTGAACTGGAAAACAATATAAGGCAGATGAAGTTGGATTTGGGCATTGAGGTTGATGAGGAATATGAAGAGGACGGTTCAGATTCAGAAAATGAGAATAATGAAGCAGTTTCCTCTGCAAGATACGATGAGGACCAAGATGATTTTGATGAATCAAGTGATGAAGATGAATATGATGATTATGATGAAGATGATGACGATGACGATGACGAAGGCGTTGATAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MALSELPLHHSFRLSSRPHLRLLPLRLLSSRHASSSSSTTAAASSSSSSSSSGGNRAPPAPNPTRGAPWLQKWGPTDPAAPPPPPLAPSPTSSIDRIVHRLRNLGLASDDDEPAAAAATATAPPDGNERLSDLLDRSWARPDQQFAASSFDESVLPWERDEVARGRENEEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQREIAARLNMQNTEDMTEEELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDEEYEEDGSDSENENNEAVSSARYDEDQDDFDESSDEDEYDDYDEDDDDDDDEGVDS</aaseq>

Gene Sequence

<dnaseqindica>1..756#978..1455#1554..1684#2313..2657#2817..2973#3051..3343#3459..3518#3975..4064#4141..4236#ATGGCGCTCTCCGAGCTCCCGCTCCACCACTCCTTCCGCCTCTCCTCCCGCCCCCACCTCCGCCTCCTCCCGCTCCGCCTCCTCTCCTCCCGCCACGCCTCTTCCTCCTCCTCCACCACCGCCGCCGCGTCCTCCTCCTCCTCCTCCTCCTCCTCCGGCGGCAACCGCGCCCCTCCGGCTCCAAATCCAACCCGAGGCGCGCCGTGGCTGCAGAAGTGGGGGCCCACCGACCCCGCCGCGCCGCCGCCACCACCTCTGGCTCCCTCCCCGACCTCCTCCATCGACCGAATCGTCCACCGCCTCCGCAACCTCGGCCTCGCCAGCGACGACGACGAGCCCGCCGCCGCCGCCGCCACGGCCACCGCGCCTCCCGACGGCAACGAGCGCCTCAGCGACCTGCTCGACCGCAGCTGGGCGCGCCCCGACCAGCAGTTCGCCGCCTCCAGCTTCGACGAGTCCGTCCTCCCCTGGGAGAGGGATGAGGTCGCGCGAGGAAGAGAGAACGAGGAGGACGGGGTGAAGAGGAGGAGGGTTAGGGCGCCCTCGCTGGCCGAGCTCACGATCGAGGACGAGGAGCTGCGTCGCCTCCGGCGGCTGGGGATGACTCTTCGGGACCGCATCACCGTGCCCAAGGCGGGCGTCACGCAAGCCGTCACGGAGAAGATCCACGACGCCTGGAGGAAATCAGAGTTGGTCCGGCTCAAGTTCCACGAGGACCTCGCGCACGACATGAAAACTGCTCATGAGCTAGTCGAGGTGTGTGCTATATTAGCCCTTTCTATCAGCATTGGCAGCTTGCTCGTTGTAACTGTTTAATCTATTATGTTTTTTTTTTGGATATCAGTTCAGTTTAGTGATTTCTAGTGGCAATTGAACTTGAATTATTATGTTTGTTGCTGTGAATTCGAGGTTTTCGATGAGTTATTAGTTGTGCCATGATAAATGGATTACTTACATGACGTTTGCCTATCGATCAGCGACGGACAGGAGGATTGATCATATGGAGGTCTGGGAGTGTTATGGTGGTTTACAGAGGGAGCAATTACAAAAGGCCTTTGAAATCTGAAACATTGGATGGTAACTCATCAGCGGTGAAAGGGGCAGACGGTACATTGTTCATCCCGGATGCATCAAGCCCCACAGAGCATGATAGCCAGGGGAAGGATGTAAACACCCAACGTGAGATTGCAGCCAGATTAAACATGCAGAATACTGAGGACATGACTGAAGAGGAGCTGGAGTTCAATCAAATGCTTGATGAGTTGGGCCCTCGTTTTGTGGATTGGTGGGGAACAGGCATTTTACCTGTGGATGCCGACTTGTTGCCTCAAACAATTCCTGGTTATAAAACACCATTTAGACTTCTTCCAACTGGAATGCGTTTGACCCTAACCAATGCAGAGCTGACTAATTTGCGGAAGTTAGCAAGGGATCTTCCATGCCATTTTGCTCTAGGTAATTATTTCGACAGTGTTCATATTGTTTATCCCCTATTATAGCTTTTATTTGTTGGTGGCACACGCCTGACTACTGCTTGATAAAATTCATTTAAGGGAGAAACCGGAATCATCAAGGCCTTGCAGCAGCTATTGTTAAGCTCTGGGAGAAGAGTTTGGTGGTGAAAATAGCTGTGAAACGTGGAATCCAGAATACAAACAACAAGCTAATGTCAGAAGAAATAAAGGTTTGGACACCATGCTGTTGCTGTTTTGACTCATTGACTGGCATACCTACTTACTTCACAGTTCACAGAATTTATGCCAAGGAACATTGAAAACTATGGTAATTGCCAGATTATATCTAAATATACAATTGCTTGTCATAGCTAAGCTGAATATATGATATATATAGTCGTATTTGAGGCATGAAGAAATTCAACTAAAAATCCTGATAAAAAAGGGGCAACTATAAGGAATACTCAGTACTCACTTACTCAGCAGTAGGTTTTGATGAAGTCCATATTTGTCCTGTGAATATTACAAAATCCATGATTTGTTAAATCATCCAAAGCAACACCAGGGGTTTCGGAAAATAATAAAAAAATTGTGCTGCACTGCTTGCTCTAATGAATATGACTTGCTTAATGTAATGCTTTTATTTGTCTAAACACCATCATAGACAATCATGCTTTACCAATATCATGATGGAAACAGCTTCATATAGTTTAGTTCTATTCCTTGTCGAACTTTCATAGAGTTCCAAAGGTGTGTTTCCATGAATCACCTGTGTTCAACTGTTCATGCACTATATTTGATTTAACCTGTATAGGATTTCTGAATCAGTGAAGCCTTATCTTTTTAACATTATTTCAGAATCTAACAGGGGGCACCTTGCTTCTTCGAAATAAGTACTACATTGTAATATATCGTGGAAAAGACTTCCTTCCAACATCTGTTGCAGCTGCTTTGGCTGAAAGAGAGGAGTTGACAAAAGATATCCAGAATGTAGAGGAGCAGAAAAGATGCATTCCGGTTGTGCACTCAATGGATGACAGTTTAGATGGGCATGCTCTTGCGGGTACTCTTGCTGAATTTCAGGAGGCTCAAGCTCGTTGGGGAAGGGAAGTAACTGCTAAGGAGCAAGAAGAAATGAAAGAAGCATCTTCTAGATCAGTGAAGGAAAAGCTTTTCAAGAGACTAGAGCACAAACTTTCCATTGTAAGCATTTTCTGCATGTTCTCTGATAAAACTTGTCTTATTTTGTATTGCTATTTTTTAATTATGCCGTTGATCTAGGTATGCCAGTGTGCTTATTTGACATATATTTATTTCCATCAGTTGTTATGCATGTTCTTTATTTCTTCTTCAATTGTTCAGGCACAGGCAAAAATACATAGAGCAGAGCGGTTACTATCAAAGATAGAAGCTTCTATGGTCCTTGCTAATCCATCTGATGATAAAGAAATGATTACAGATGAGGAAAGATCTGTTTTCCGTAGAATCGGTTTGCGTCTTAAGGCATACTTGCCTGTTGGTGAGTTTCTTGAACAATAACCTTGGAGAGCATTCTATACTATTTCTATTGATTGATTATTCCCCCTTCCATTTTAGGAATTCGTGGTGTCTTTGATGGCGTCATTGAAAATATGCACTTGCATTGGAAGCACAGGGAAGTTGTCAAATTGATAACAAAGCAGAAGACTCTGCCCTTTGTTGAGGAGACAGCACGGCTTCTAGAGTATGAGAGTGGCGGTATACTAGTCGCCATTGAAAGAGTTCCAAAGGGCTATGCACTTATATTTTACCGTGGAAAGAATTATAGGAGGCCTATTAACATAAGGCCTAGGAATCTTTTAACAAAAGCAAAGGCATTGAAGCGTGCTGTTGCAATGCAGCGTCATGAGGTTAGTTTGCTACAAAAGAAAAAAGCAAGAGCAGTACCTTCTTTTTTTATGATAATCATTGTACACAACTTTAGCATCCTTCTGATATTGTTTAAACTCATGAATTGTTATGCAGGCCCTCAGTCAGCATATAGCTGAACTGGAAAACAATATAAGGCAGATGAAGTTGGATTTGGTACGTAATTTCTCATATTACAGAAAAGTAGTTGTGTTTTAATTAAGGCAAACATTTAGCATAACGAACCCTTTTTTCTTCTCATTATACAGCACTAAAACTAATTTCTGTAGGCTTAAAATGTAATATGATGCCATGCCTTTTGTAATTTTTGCCATTTGCATCAGAGTAAAAACATATTAACATGCATCTTAGTTGATCCTCTGCCCACTAAATGGCCTTTAAATTCCACAATATTTACCTATTGTTTTAGCAAAAAAACAAATGTTGTTATTCATTGGCATTTCATTATTAAGGCAACAACTTTCCCTTAGACTGCATTTTTTTTCAGCAGAGATGTTCTTGACAGTGAGGCATATATCTGTTGGTGCGCTAGTGATAAATTGATCATATATGTCTTTTAGTTAATGTCTTCATTGATGAATGCTTTCCTGATTTTATGTCAAAACAAAATAGGGCATTGAGGTTGATGAGGAATATGAAGAGGACGGTTCAGATTCAGAAAATGAGAATAATGAAGCAGTTTCCTCTGCAAGATACGATGAGGTATCCAATCTTTTGAAACTGATGCTGTCTGTTTTAGAACCACCATAAAATCCATTCTTCCCTTTAACGTGTCCAGGACCAAGATGATTTTGATGAATCAAGTGATGAAGATGAATATGATGATTATGATGAAGATGATGACGATGACGATGACGAAGGCGTTGATAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017612

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017612&oldid=46368"