Os11g0642100

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Revision as of 09:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0642100| Description = Cyclin-like F-box domain containing protein| Version = NM_001074887.1 GI:115486422 GeneID:4351007| Length = 1753 bp|...")
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Gene Name

Os11g0642100

Description

Cyclin-like F-box domain containing protein

Version

NM_001074887.1 GI:115486422 GeneID:4351007

Length

1753 bp

Definition

Oryza sativa Japonica Group Os11g0642100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27303873..27305625

Sequence Coding Region

27304389..27305591

Expression

GEO Profiles:Os11g0642100

Genome Context

<gbrowseImage1> name=NC_008404:27303873..27305625 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27303873..27305625 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccggcgatgaccgcctgtctgacctccccgacgaactcgtcctccgcatcctccacttcgcgaacgccaaggaggccgcgtccaccagcttgctctcgcggccgttcggcgcgctctggcgctcctccggcgccgtcaacctcgccgcgcgcgtcccctgcggcagcagatacatcggaagagcggctctgatcgcccgccgcgacgccttcgtccgtgcggccgaggcggcgctctccgccgccgccgccgccgaccaccgcgtcacgaggctcaccgtccacatcgagtgcgacaaggaggacaaaggctcgatcgccagcttcctcctcagcagcgagaacgacgagcgccgcggccaccgcgacgtgttcgacgccgtcctctcccacccggcggcgcgccgcgtcgaggagctcagcgtcgccgccgtccaccctcactggggcgacaagggcaacatcgtgagcagccacggcgtcgggatctacagcatcaatcccgccaaccttccgtcgaacaccctccgcgttctggacctcaccaactgccgcagcctcgcgccgtcggcggccgccgccgccgccgccgcgttcccgcggctggagacgctgcggctgcgacactgcacgacgaacatcgacgatctccaccgcatcatcgacgccgcgccggagctcgccgccgtgcgcctcgagttcgtccatctcatatccaacatccgcgatgtccacttcctggtgcagctggcaatgtcctccaccacccgcctccgcttcccggctgccaccgcgctcacgctgatcaactgcctcaccaacggcggcatgagcggcagcgttatcgacgcgccgaggctacgatccttgacatacaagggggcggcgaggtcgcagttcgagctaacctcgccggcgccggacatgaagatggtgcacctccacttcaaccactacttccatcaacgtgattaccttcgtttcatccataacttcaccaaggtcaaggtgctcaagctaaaggcggagcatggctgtccatggcgtattcttccccaacattgctcgcctcgagctcgacggaggtttcaaccgttggagcaagacggcgaaggccgccgcgatcgcgagcatgctccattgctgcccagtgctctgcgacctcaacctgaatctcatcagcacggtgtcacctga</cdnaseq>

Protein Sequence

<aaseq>MATGDDRLSDLPDELVLRILHFANAKEAASTSLLSRPFGALWRS SGAVNLAARVPCGSRYIGRAALIARRDAFVRAAEAALSAAAAADHRVTRLTVHIECDK EDKGSIASFLLSSENDERRGHRDVFDAVLSHPAARRVEELSVAAVHPHWGDKGNIVSS HGVGIYSINPANLPSNTLRVLDLTNCRSLAPSAAAAAAAAFPRLETLRLRHCTTNIDD LHRIIDAAPELAAVRLEFVHLISNIRDVHFLVQLAMSSTTRLRFPAATALTLINCLTN GGMSGSVIDAPRLRSLTYKGAARSQFELTSPAPDMKMVHLHFNHYFHQRDYLRFIHNF TKVKVLKLKAEHGCPWRILPQHCSPRARRRFQPLEQDGEGRRDREHAPLLPSALRPQP ESHQHGVT</aaseq>

Gene Sequence

<dnaseqindica>35..1237#aaccgatcgccgccgccgccgacgtcgacgaccgatggccaccggcgatgaccgcctgtctgacctccccgacgaactcgtcctccgcatcctccacttcgcgaacgccaaggaggccgcgtccaccagcttgctctcgcggccgttcggcgcgctctggcgctcctccggcgccgtcaacctcgccgcgcgcgtcccctgcggcagcagatacatcggaagagcggctctgatcgcccgccgcgacgccttcgtccgtgcggccgaggcggcgctctccgccgccgccgccgccgaccaccgcgtcacgaggctcaccgtccacatcgagtgcgacaaggaggacaaaggctcgatcgccagcttcctcctcagcagcgagaacgacgagcgccgcggccaccgcgacgtgttcgacgccgtcctctcccacccggcggcgcgccgcgtcgaggagctcagcgtcgccgccgtccaccctcactggggcgacaagggcaacatcgtgagcagccacggcgtcgggatctacagcatcaatcccgccaaccttccgtcgaacaccctccgcgttctggacctcaccaactgccgcagcctcgcgccgtcggcggccgccgccgccgccgccgcgttcccgcggctggagacgctgcggctgcgacactgcacgacgaacatcgacgatctccaccgcatcatcgacgccgcgccggagctcgccgccgtgcgcctcgagttcgtccatctcatatccaacatccgcgatgtccacttcctggtgcagctggcaatgtcctccaccacccgcctccgcttcccggctgccaccgcgctcacgctgatcaactgcctcaccaacggcggcatgagcggcagcgttatcgacgcgccgaggctacgatccttgacatacaagggggcggcgaggtcgcagttcgagctaacctcgccggcgccggacatgaagatggtgcacctccacttcaaccactacttccatcaacgtgattaccttcgtttcatccataacttcaccaaggtcaaggtgctcaagctaaaggcggagcatggctgtccatggcgtattcttccccaacattgctcgcctcgagctcgacggaggtttcaaccgttggagcaagacggcgaaggccgccgcgatcgcgagcatgctccattgctgcccagtgctctgcgacctcaacctgaatctcatcagcacggtgtcacctgactatttcaagaactcgaagcaagttcagcatttctttcaaagaaaatcccagcttgatttcgacaggtcgatcgatgatttcatgcgaaacagcatatcaaagcgtggtgatcatcgccataacggcgatgaggtttctggattcatccctggattgactgcctgctccttcacctgcttgcagtacaatctgagaagagttagcctgcaattcaggttggatgagaattctgagaattttggagttcgtctggtaaaattcttcgctgaaaacgcaatggttctcgaagaattgcgcgtattgacagtggaaactgaaacctgagagagtagaacaatctgaacgttgaaggatggatgatgcccaaattaatcatccaagagtactaggaattctgcacagagtttgtctggaatttctgaaaagttcacctggttttgtagtaggagtattagtacatctatctggatttgtagtctcatcttgaaagaagaactatcaagatagttggattt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0642100, RefSeq:Os11g0642100