BGIOSGA017623

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Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017623| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017623, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017623

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017623, complete gene.

LocusTag

OS05G0549100

Ensembl Transcript ID

BGIOSGA017623-TA

Ensembl Protein ID

BGIOSGA017623-PA

Length

3722

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28560284..28564005

Sequence Coding Region

28563628..28564005,28563460..28563549,28562935..28563054,28562720..28562824,28562220..28562388
,28562046..28562139,28561815..28561908,28561660..28561716,28560557..28560970
,28560284..28560442

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28560284..28564005 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28560284..28564005 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGGTAGCCTTGGCCTCTCCACCTCCTTCCTCCCCGGCCACGACACCCTCCTCCGCCGCCGCCGGCGGCGGCCGCCGGCGACGACGGCGGCGTCGTTCCGCCCGGTGACGGCGGAGCTCGGCGGGGAGCTGGGGCGGCAGCTGGTGGAGGCGGTCGGGGTGGGGCTCCCCTGCACGGTGATGGCGTGCGGCGACGTCATCTACCGCAGCACGCTCCCCCGCAACGACGGGCTCACCATCACCGCCCCCGGCGTGGCGCTCGCCCTCGCCGCCGCGTCCTACCTCTGGTCCACCCCCGGCGTCGCGCCGGGCTTCTTCGACATGTTCGTGCTCGCCTTCGCCGAGCGCGTCTTCCGCCCCACCTTCCGCAAGGATGAATTCGTGCTCGGGAAGAAGCTTGGGGAGGGCGCGTTCGGAGTCGTCTACAAGGCGTCGCTGGATGACCCCAAAGCTGCGGAGAAGCAAGGTGCTGTGGTTGTGAAGAAGGCAACAGAGTATGGTGCGGTAGAAATATGGATGAACGAGCGTGTCAGGAGGGCCTGTGCTAGCAGCTGTGCAGATTTTATTTATGGCTTTCGTGAGAGCAAAGCTAAAGGTAAGGGAGCTGATGAATACTGGCTTATTTGGCGTTATGAAGGTGAGGATACACTATTCGATCTCATGCAAAGCAAGGAGTTCCCTTACAATGTTGAGACTAAGATTCTAGGAGATGTTCAAGACCTGCCAAAGGGAATAGCAAGAGAGAATAAGATTATTCAAACAGTAATGAGACAACTCTTATTTGCTCTTGATGGCCTTCATTCAACAGGGATTGTTCACAGAGACGTAAAACCCCAAAATGTGATATTTTCGGAAGGATCTCGTACGTTCAAAATTATTGATCTTGGAGCAGCAGCTGATTTGCGAGTGGGCATCAACTATATTCCTAGTGAGTTCCTTTTAGATCCAAGGTATGCTGCACCGGAGCAATATATAATGAGCACTCAAACACCATCTGCTCCCTCTGCTCCAGTTGCAACTGCTTTATCTCCAGTCCTTTGGCAGTTGAACCTTCCTGACAGATTTGACATATATAGCCTGGGCCTTATATTCTTACAAATGGCATTTCCATCATTGAGAACGGACAGCAGCCTCATACAATTTAACCGCCAACTGAAGAGGTGCAACTATGACTTAGAAGCTTGGAGGAATTTGGTAGAGCCACGAGCTACCCCGGAGCTCCGGAGGGGCTTTGACATCTTGGATTTAGATGGTGGTATTGGATGGGAACTTCTCACATCGATGGTCCGGTACAAAGCACGGCAAAGGACTGGTGCTAAGGCTGCACTGGCGCATCCATATTTCAACCGCGAGGGGCTCCTTGGCCTCTCTGTAATGCAAAACTTGAGGCTGCAACTGCTTCGTGCAACCCAGAAGGACTACAGTGAAGCAGCCCGTTGGGTCGTCGGCCTCATGGCAAGATCAGGAACAGAAGCAGAAGGAGGTTTTACAGAGGCACAACTTCAAGAGCTTAGGGAAATCAAACCAAAGAAAGGTAGTGCACGGAGGAACTTGCTTGCTTCCGTGCTGCGTGTACAGAGAAAGGTCGTGAGGACAATCAACGAAAGCATGGATGAGCTTAGCAGCCAGAGCAAAAGCATTTGGTGGAGCCGGTGGATACCAAAGGAGGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MATGSLGLSTSFLPGHDTLLRRRRRRPPATTAASFRPVTAELGGELGRQLVEAVGVGLPCTVMACGDVIYRSTLPRNDGLTITAPGVALALAAASYLWSTPGVAPGFFDMFVLAFAERVFRPTFRKDEFVLGKKLGEGAFGVVYKASLDDPKAAEKQGAVVVKKATEYGAVEIWMNERVRRACASSCADFIYGFRESKAKGKGADEYWLIWRYEGEDTLFDLMQSKEFPYNVETKILGDVQDLPKGIARENKIIQTVMRQLLFALDGLHSTGIVHRDVKPQNVIFSEGSRTFKIIDLGAAADLRVGINYIPSEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSLGLIFLQMAFPSLRTDSSLIQFNRQLKRCNYDLEAWRNLVEPRATPELRRGFDILDLDGGIGWELLTSMVRYKARQRTGAKAALAHPYFNREGLLGLSVMQNLRLQLLRATQKDYSEAARWVVGLMARSGTEAEGGFTEAQLQELREIKPKKGSARRNLLASVLRVQRKVVRTINESMDELSSQSKSIWWSRWIPKEE</aaseq>

Gene Sequence

<dnaseqindica>1..378#457..546#952..1071#1182..1286#1618..1786#1867..1960#2098..2191#2290..2346#3036..3449#3564..3722#ATGGCCACCGGTAGCCTTGGCCTCTCCACCTCCTTCCTCCCCGGCCACGACACCCTCCTCCGCCGCCGCCGGCGGCGGCCGCCGGCGACGACGGCGGCGTCGTTCCGCCCGGTGACGGCGGAGCTCGGCGGGGAGCTGGGGCGGCAGCTGGTGGAGGCGGTCGGGGTGGGGCTCCCCTGCACGGTGATGGCGTGCGGCGACGTCATCTACCGCAGCACGCTCCCCCGCAACGACGGGCTCACCATCACCGCCCCCGGCGTGGCGCTCGCCCTCGCCGCCGCGTCCTACCTCTGGTCCACCCCCGGCGTCGCGCCGGGCTTCTTCGACATGTTCGTGCTCGCCTTCGCCGAGCGCGTCTTCCGCCCCACCTTCCGCAAGGTGAGCGCGGGCACTCGCGACGCCCTAACTCTTCCGCGCTTCTTCGATTGGGGGGATGATTTGGTTGCTTTTTGGCAGGATGAATTCGTGCTCGGGAAGAAGCTTGGGGAGGGCGCGTTCGGAGTCGTCTACAAGGCGTCGCTGGATGACCCCAAAGCTGCGGAGAAGGTAAACAGTAATGTGCATCACTGCATCTGCGTGTAAAAGCTTCAGATATGTAGAATTTTGTGTTGCTGATGCATGGCTGCTGCTTGCCTTAGTGGAGGGAATGAAGTAACCCCGGGTAATTGAAGTTGGTCATGAAGAAAGTGAAAATGTATTTGTGAGTTCATGTTGATAGTATGTAGAAGGGGTTGCACTTGAACAAATATTTTGGTGGCTGTGAATTTGTGATAAGTTAATCAGCCGCATAGTTTGTTTTTATAAGTAACTCAAAGTATTAGGTGTGTACCTAAAACCCCGTGAAAGTTTTCTAAACAAGCTTTTGAAGATCAATATCACAGTATATTTTTATGAGTTAGATAGTTGCTAGGCCATGCATACTAATGATCATACCTTGTTTGTCTCTTGAAGCAAGGTGCTGTGGTTGTGAAGAAGGCAACAGAGTATGGTGCGGTAGAAATATGGATGAACGAGCGTGTCAGGAGGGCCTGTGCTAGCAGCTGTGCAGATTTTATTTATGGCTTTCGTGAGGTATAAATACTCTCATGTTTGTGTACTATCATCTTATTATGGACTTACCTTTGTTTGCAAACAATATGATAGACTCCTAACACTCACATTGCATATATATTTCTTTCTAGAGCAAAGCTAAAGGTAAGGGAGCTGATGAATACTGGCTTATTTGGCGTTATGAAGGTGAGGATACACTATTCGATCTCATGCAAAGCAAGGAGTTCCCTTACAATGTAAGTGTTGCCATACAAACTGAAAAATAGTTTCAGGTCGGTCAAGTTTGTTACATTCTTGCTTCCATTGGCTCCAGTTGAACAGTTCTTTTTTTCAGTTAATGAAATAATCAGATGAGTTTGTATTACTAGTGACATTATTCTCATTGCAATCTTTCGTGCTGTCATTTATCTAGATTGATTTTGGAAGGGGGTAATTAAGCCTCTCATTTAAATCATGTTAAAAACTTAAATCAACAGATGCGATAAACAAATTGAATTAGTATGACCTACAGGATTAGTTCATCTTCAATCAACATTTATCATTTCAAATTTGTTTGCGGTTTATCAGGTTGAGACTAAGATTCTAGGAGATGTTCAAGACCTGCCAAAGGGAATAGCAAGAGAGAATAAGATTATTCAAACAGTAATGAGACAACTCTTATTTGCTCTTGATGGCCTTCATTCAACAGGGATTGTTCACAGAGACGTAAAACCCCAAAATGTGATATTTTCGGAAGGTAATAATCGGAACATATTTTGTTTGTAGTATCATGAAAATACCTTTTGAGCTAATATTTTCAGTTTTGTCTACTGATAGGATCTCGTACGTTCAAAATTATTGATCTTGGAGCAGCAGCTGATTTGCGAGTGGGCATCAACTATATTCCTAGTGAGTTCCTTTTAGATCCAAGGTACTCAAAACTACCTCATGATCCATAACTGCACTGCTCGCAAAGAAGAAGTTATGTTTTAAAGTTAATTAATGCTATAATGTGCTAAAATATAGTTTGATTAGGGATTTGATTGAAGCTTTATCAATGCTTTGCAGGTATGCTGCACCGGAGCAATATATAATGAGCACTCAAACACCATCTGCTCCCTCTGCTCCAGTTGCAACTGCTTTATCTCCAGTCCTTTGGCAGGTACTCTTTAAATCCTTTTATTTGTGTCAGTTCTTTATTATAGTTATTCAATCAGTTTGTTGCATGATCTAATGCATCGATTTTCTTTTCATTGGCAGTTGAACCTTCCTGACAGATTTGACATATATAGCCTGGGCCTTATATTCTTACAAATGGTATGTTATTACAGGAGTATTAGATTAATAGTGTTTCAATGCATTCCGAAAAACTGATCTCTAGATTGATGTGCTTTTGTCATACTGGAATTTCTCCAACCATCCTCCCAATTTAAGCAGCAGTTTTTTTTTTTTTAACCTGGAGCAGCAGGGGAGCTTCTTACCCATAATTTGAAATGTCACAATACTAATCCCCCTTTACCACTGTTTCTACAAAATCTTTTACTCTGCTCATGTTGAGCTTGTAGCGACTGCTATGTTACTTCCTAGCAAGATGAGTCAGCATTTATAGTTAGCGCATTACATACATAGTTGCCAACATTTGAGTGGAGCCTGTGTTGATCTCTGTTCTTCATAACTTGAGATAATGTACAAGTGTGTTTCATCCTTTTCTTCCTTTGGACTTCTTCATACAAGTTTAATTTATCCAGCTGTTAGCCACACCTCCTCACTTCAGTGCATGGGGGCACTGTGAATACATGTCCAGGACACCAAATGTAATATGTTTGAACTGTCATTTTGAGTTCTTGACAGTAATGTTGTGCTGCATGGCATTCCAACCAAAAAGTTCTTTGACAAGATATTGGAATAAGAGTAACTAACTTTTGATGTTTCTGAACATATTGATCTGTATAGATGTTCATTAAAATGCTGTTATTGATCTTCTCTAACACATCAGTCTTTCTTAGGCATTTCCATCATTGAGAACGGACAGCAGCCTCATACAATTTAACCGCCAACTGAAGAGGTGCAACTATGACTTAGAAGCTTGGAGGAATTTGGTAGAGCCACGAGCTACCCCGGAGCTCCGGAGGGGCTTTGACATCTTGGATTTAGATGGTGGTATTGGATGGGAACTTCTCACATCGATGGTCCGGTACAAAGCACGGCAAAGGACTGGTGCTAAGGCTGCACTGGCGCATCCATATTTCAACCGCGAGGGGCTCCTTGGCCTCTCTGTAATGCAAAACTTGAGGCTGCAACTGCTTCGTGCAACCCAGAAGGACTACAGTGAAGCAGCCCGTTGGGTCGTCGGCCTCATGGCAAGATCAGGAACAGAAGCAGAAGGAGGTTTTACAGAGGCACAACTTCAAGAGCTTAGGGTACGCATGACAGCATAGCTGAAAGCCTGAAACTCTCTAGCTCAAATTTATCATTTCGTTTTCATAATGACTATTTGTTTCGAGGGGTAATTCATTTCCTTTTCTGCTCGACAGGAAATCAAACCAAAGAAAGGTAGTGCACGGAGGAACTTGCTTGCTTCCGTGCTGCGTGTACAGAGAAAGGTCGTGAGGACAATCAACGAAAGCATGGATGAGCTTAGCAGCCAGAGCAAAAGCATTTGGTGGAGCCGGTGGATACCAAAGGAGGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017623