BGIOSGA017625

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Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017625| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017625, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017625

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017625, complete gene.

LocusTag

OS05G0548900

Ensembl Transcript ID

BGIOSGA017625-TA

Ensembl Protein ID

BGIOSGA017625-PA

Length

3695

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28544299..28547993

Sequence Coding Region

28547972..28547993,28547706..28547831,28546683..28546846,28546441..28546578,28546137..28546280
,28545758..28545868,28545535..28545676,28545180..28545460,28544841..28545002
,28544684..28544737,28544485..28544559,28544299..28544394

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28544299..28547993 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28544299..28547993 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCGTCGCGGCGAATGGGATCGGGGAGGTGGAGAGGAAGGCGCAGCGGAGCTACTGGGAGGAGCACTCCAAGGACCTCACCGTCGAGGCCATGATGCTCGACTCCCGCCCCCGCCGACCTCGACAAGGAGGAGCGCCCCGAGGACTGATTGGCACTGTTGATGCGCAGGTCCTGTCTGTACTCCCTTCTTACAAAGGGAAATCAGTACTGGAGCTTGGTGCTGGAATAGGACGCTTTACTGGGGAACTGGCAAAAGAAGCTGGCCATGTTTTAGCCCTAGACTTCATTGAAAGTGTGATTAAGAAGAATGAGAACATAAATGGGCATCACAAGAACATAACCTTTATGTGCGCTGATGTCACGTCTCCGGACCTGACGATCGAAGATAACTCTATTGATCTCATATTCTCAAACTGGCTACTAATGTACCTTTCAGATGAGGAGGTCGAGAAGCTAGTAGGAAGAATGGTGAAATGGCTGAAGGTAGGTGGCCATATATTCTTTAGGGAGTCATGCTTTCACCAATCTGGAGATTCCAAAAGGAAGGTGAATCCAACACATTACCGGGAGCCAAGGTTCTATACAAAGATATTTAAAGAATGCCATTCCTATGATAAAGATGGGGGTTCTTATGAACTTTCTCTAGAAACATGCAAGTGCATTGGGGCTTATGTGAAAAGCAAGAAAAATCAAAATCAGTTATGTTGGCTATGGGAAAAGGTTAAGTCAACAGAAGACAGAGGATTCCAAAGATTCCTGGACAATGTGCAGTACAAAACCACTGGAATCTTACGCTATGAGCGTGTCTTCGGAGAGGGTTATGTCAGCACTGGTGGAATTGAAACCACAAAGGAATTTGTGGATAAGCTGGATCTTAAACCTGGACAGAAAGTGCTTGATGTTGGGTGCGGAATTGGAGGCGGCGACTTTTATATGGCTGAAAACTACGATGCCCATGTTCTTGGTATTGATCTTTCAATCAACATGGTTTCATTTGCAATCGAACGTGCCATTGGACGCAAGTGTTCGGTTGAGTTTGAAGTTGCTGATTGCACCACAAAGACCTACGCACCAAATACATTTGATGTGATCTACAGCCGTGACACCATTCTTCACATACATGATAAACCTGCTTTGTTCAGAAGTTTCTTCAAGTGGCTGAAACCTGGGGGCAAAGTCCTCATCAGTGATTACTGTAGGAATCCTGGGAAACCATCAGAAGAATTTGCTGCTTACATTAAGCAGAGAGGCTATGACCTCCACGATGTGAAGACTTACGGAAAGATGCTTGAGGATGCTGGTTTCCATCATGTCATTGCTGAAGACCGCACGGACCAGTTCCTGCGTGTTCTTCAAAGGGAGCTTGCTGAAGTTGAGAAGAACAAAGAAGCCTTCTTGGCAGACTTCACCCAGGAGGACTACGATGACATTGTGAACGGCTGGAACGCGAAGCTGAAGCGGAGCTCTGCCGGTGAGCAGAGGTGGGGGCTGTTCATTGCAACCAAATGA</cdnaseq>

Protein Sequence

<aaseq>MDAVAANGIGEVERKAQRSYWEEHSKDLTVEAMMLDSRPRRPRQGGAPRGLIGTVDAQVLSVLPSYKGKSVLELGAGIGRFTGELAKEAGHVLALDFIESVIKKNENINGHHKNITFMCADVTSPDLTIEDNSIDLIFSNWLLMYLSDEEVEKLVGRMVKWLKVGGHIFFRESCFHQSGDSKRKVNPTHYREPRFYTKIFKECHSYDKDGGSYELSLETCKCIGAYVKSKKNQNQLCWLWEKVKSTEDRGFQRFLDNVQYKTTGILRYERVFGEGYVSTGGIETTKEFVDKLDLKPGQKVLDVGCGIGGGDFYMAENYDAHVLGIDLSINMVSFAIERAIGRKCSVEFEVADCTTKTYAPNTFDVIYSRDTILHIHDKPALFRSFFKWLKPGGKVLISDYCRNPGKPSEEFAAYIKQRGYDLHDVKTYGKMLEDAGFHHVIAEDRTDQFLRVLQRELAEVEKNKEAFLADFTQEDYDDIVNGWNAKLKRSSAGEQRWGLFIATK</aaseq>

Gene Sequence

<dnaseqindica>1..22#163..288#1148..1311#1416..1553#1714..1857#2126..2236#2318..2459#2534..2814#2992..3153#3257..3310#3435..3509#3600..3695#ATGGACGCCGTCGCGGCGAATGGTAAGCGCGCGCGAGCGGATGAGAGATCCGAATGTTTTTGTGCTTTTGTGTTTGTGTTTTTGTTAGTGGAGGTGGAGGGGGATTGGGGGTGTGTTGATGATGATGGGGGGTTTTGGTTTTGGTTGGATGGATGCGTGCAGGGATCGGGGAGGTGGAGAGGAAGGCGCAGCGGAGCTACTGGGAGGAGCACTCCAAGGACCTCACCGTCGAGGCCATGATGCTCGACTCCCGCCCCCGCCGACCTCGACAAGGAGGAGCGCCCCGAGGTGACTGAATCCATCCATGAACCCATACATGCGTGCCCGCCGGATCAACCTGCAGAGATCTCTCGTGATTATTATTATTTTTTTGCAAATTCCTCTTGCATGATCTCGTTCGTTGCTGCTAAGATTCTGTCTGGCTTGTCTTCGTACGTTGTCATGTTGCTATACTGAAAAATTCGGTGATATCTTTGGACGTTCCATCGCGTACTAAACAGTGAACAAATGATACGCCCTTTTGGCCCTTATAAAGTCGATAGCAACTGCTGATAGTGACAGTATTGGAGCTAATTCGTTTCTGGGTTATACAGGTTGGCAAATTGATCAATAGGAACTGACGAGTACTAGACTTGATGCAGATAGCCTGATGCCGACCCTTCCTTTTTGTGATCCTGCAATTTTCTTGGTTTCTGCTTTGGCGAGGCCAGTAGTAATTATGCACAGATCTATGAATTAGCAGAGTTTTGCTAATTTTGGTATGGATGAGAAAAAGGTTAATCTCTGTTGGATGGCCAACTTTGCATGTCATGGGCTTGGGAGAAGTGGACAGTACTACTGGGAATTAGATAAGCATATCTTTGGTGGTTAATTAAATTTTGATTGGAGGTTACAGGCATGTGTACTACTACACAATAAAAAAAATATCTGGGTTGTGCTTGTCGTTCTCAGGCTCTACCTGCCACTTATATTGTTAACTATCAGGAATTCAGGATACTCCAGTCGTTTAGCTCCCCAATGGGCTAATTGCTATTTAGAGTATGCTTTGCTTTCACTCTGCTCTCATATTATTATTATCATGCTAATTATGCAAAGTTTGTCGTGCAGTTCTGTCTTTACTGTTGGAGTAACTGTAATTTTCGCTCAGGACTGATTGGCACTGTTGATGCGCAGGTCCTGTCTGTACTCCCTTCTTACAAAGGGAAATCAGTACTGGAGCTTGGTGCTGGAATAGGACGCTTTACTGGGGAACTGGCAAAAGAAGCTGGCCATGTTTTAGCCCTAGACTTCATTGAAAGTGTGATTAAGAAGGTGAAATTTCTCACTTCAAACTTCAAAGACCTTCATGTCTGGCAGATGGAATTTGTTGGTTATGCATAGTTCCATGAGTTTTCACTCCTTTTATCTTTCTGTAGAATGAGAACATAAATGGGCATCACAAGAACATAACCTTTATGTGCGCTGATGTCACGTCTCCGGACCTGACGATCGAAGATAACTCTATTGATCTCATATTCTCAAACTGGCTACTAATGTACCTTTCAGATGAGGAGGTAAGCTCGGGACATGTTTATGAATGTTGATACTATTTTTCTTAAAAAAAAGAATTCTGCATTTGTAGTAATCGCCAGCTAAAAATTATTTTACTAAAAAGTGGCATACATGGCATGTGTAGATTGTATGATGATCTCTAACTGCTATGGCATACTGTAGGTCGAGAAGCTAGTAGGAAGAATGGTGAAATGGCTGAAGGTAGGTGGCCATATATTCTTTAGGGAGTCATGCTTTCACCAATCTGGAGATTCCAAAAGGAAGGTGAATCCAACACATTACCGGGAGCCAAGGTTCTATACAAAGGTTACAGCTTCAACTCAAGTTTCTTTCTTAATTACAGTCAGTCTTAAAAGTGAAATTTTGCTAACTCTACAACTTCCAACCTTTGTTTGCCCTATATATTTAACTGAAGCATATTTGTAGTGGATGCTTATAATTTTGTTAGATAATTAGTGAGGGCTACTGTATGTTTTGTGATACTTGCATAATTTTTCGTATTTTATGGTCAATAAGACGATAGCAAAACATACTTCCCATTTCTATCCAGAAACTAACTAATTTTTTAACATAGATATTTAAAGAATGCCATTCCTATGATAAAGATGGGGGTTCTTATGAACTTTCTCTAGAAACATGCAAGTGCATTGGGGCTTATGTGAAAAGCAAGAAAAATCAAAATCAGGTACTCATCTCCTTCGGTGACATACACTGTTGCACTTTGGCAATCAAACAATACTGACTGTTACAACCTTATTGTCCATAGTTATGTTGGCTATGGGAAAAGGTTAAGTCAACAGAAGACAGAGGATTCCAAAGATTCCTGGACAATGTGCAGTACAAAACCACTGGAATCTTACGCTATGAGCGTGTCTTCGGAGAGGGTTATGTCAGCACTGGTGGAATTGGTCAGTTGAACAATTTCCTTGCCTCTATTAAAATGTCAACATTTACTCATTCAAACATGCTTATTGATGAACAGAAACCACAAAGGAATTTGTGGATAAGCTGGATCTTAAACCTGGACAGAAAGTGCTTGATGTTGGGTGCGGAATTGGAGGCGGCGACTTTTATATGGCTGAAAACTACGATGCCCATGTTCTTGGTATTGATCTTTCAATCAACATGGTTTCATTTGCAATCGAACGTGCCATTGGACGCAAGTGTTCGGTTGAGTTTGAAGTTGCTGATTGCACCACAAAGACCTACGCACCAAATACATTTGATGTGATCTACAGCCGTGACACCATTCTTCACATACATGTATGTTTCACTTCAGAGAATTTACAGATGTTTCTACAAGTATCCTACTTAACACAATTATACTACGAACAGCTGTTCGCCAGCATAGCTGATCACGGGATACTTACCTATAACAACTTTGTAGTTGAGTTAACCACAGAAGCAACAGTCTTACGATTGCTATACATGGTTTTACAGGATAAACCTGCTTTGTTCAGAAGTTTCTTCAAGTGGCTGAAACCTGGGGGCAAAGTCCTCATCAGTGATTACTGTAGGAATCCTGGGAAACCATCAGAAGAATTTGCTGCTTACATTAAGCAGAGAGGCTATGACCTCCACGATGTGAAGACTTACGGAAAGGTTTGCTTCTGCAGTGACATTAACATATCAATAAATCTAACTTGTTAGGTAGATTTGAACAAAAAGAGGTGAACCACTCTGACTTCTGTTTGCACAACACTAGATGCTTGAGGATGCTGGTTTCCATCATGTCATTGCTGAAGACCGCACGGACCAGGTTATCACCCTACCTCTCTGAATTCCGCTCACTGTTGTGCACCTCCAAATCCATTTTTTTCTACGACGCTTGGACAAATGCGATTCGTTCGAGACTAATCACTGCCACATGCAATATGTTTCAGTTCCTGCGTGTTCTTCAAAGGGAGCTTGCTGAAGTTGAGAAGAACAAAGAAGCCTTCTTGGCAGACTTCACCCAGGTTCGTGCTTCCCAGCTCTGACGCCTGCTTATGCTTTTCCATGACTCCAAGTGAGCATTCTCTCAATTGTCCTCCCATGTATATTATCAGGAGGACTACGATGACATTGTGAACGGCTGGAACGCGAAGCTGAAGCGGAGCTCTGCCGGTGAGCAGAGGTGGGGGCTGTTCATTGCAACCAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017625

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017625&oldid=46381"