BGIOSGA017636

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Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017636| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017636, complete gene.| tag = OJ1206_...")
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Gene Name

BGIOSGA017636

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017636, complete gene.

LocusTag

OJ1206_C08.4

Ensembl Transcript ID

BGIOSGA017636-TA

Ensembl Protein ID

BGIOSGA017636-PA

Length

6918

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28379380..28386297

Sequence Coding Region

28386053..28386297,28385890..28385970,28384803..28385040,28384001..28384193,28383773..28383922
,28382467..28382588,28382252..28382311,28381675..28381757,28381095..28381257
,28380847..28380976,28380428..28380586,28380178..28380350,28379972..28380052
,28379380..28379460

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28379380..28386297 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28379380..28386297 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTATGAGGAGGGGCAGTGGTGGCGCTGGCGCTGACCAGGAGGGCGGCGTTCCGATGGGTGGGAGTAGGGGCAGTGGCGATGCCGGCACTAACAAGGAGCACGGCGTTCCGATGGGTGGGAGGAGGGGCAGTGGTGGTGCCTGCGCTGACCAGGAGGGCGGCATTCCGATGGGTGGGAGGAGTGGCGGTAGTGGTGCCGGCGTCGGCTTGGATTGGGTGTGGGACTGGCGTAATCCCAACAGGTCTGTGCCGCCACCACCAACAGAAGATATCCCAGCTGTCCCAGGAAGCTCAGGAGTACTACCTCTCTCCAATCTCCAGAGGCATTCTGAGAAATTATCTGATACACATGGATCAGATAAGGAAGATGAAGTGGTGGATTCTTCAGACGATGATTGTGATCCATATTTTAACTATTTGGTTGATAGCTTTATGACTGCAACTAAAGCTCAACCAAAACAGTTGTATGGCAATATTGATCTTGTTGCAGCTGCACAACGTCAGTCTAATGAGTATGCAAGTAGTGCTTTGGATTACTATAACAAGGATGAAAACAATAAGATTCAATACAGCTTAATCAAAGCCTTAAAAAGCAGTACAATTAGAGAGAAGGGTGAGAAATATGGACATGTCAACTTCATAGCATCTTTAGATTCAAAGGAAGAGCTATTTTTCGCCGAAGTTTGTTGGGATCCCAAGAACTATGATATGGTGCCGACCTGCATTGTATCTCTTGAGGAGAAAAGGAGAATTGGGGGACGCTCCTTTATTAATGACGAGTATGTGGTGTGTCTGGATCTCCAAAATCCGCCTATAGATGGCAAGCACTGCTATGGATGTAGCGAAGAGATTAAGCACCCAGAAGATGGATCTACGTTTAAGGCCGGGCATGTAGCCGCCACCGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGCGAAGCAGGTGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAATTTCAGGAACTCGGAGAGGCATACCAAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGGATAACATGGTGGATCCTGCTGCTGTCTTTGGGATGCTTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACGGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATTCATAGCTGAGTGGGTCAGAGACAAGGGCCACTGCATTAAATCACAGGTTAATGCCGCTTCAGGCGCTATCGCTCTGATGCAGCTACAAGAAGGGATGAAAAAGATGGAGGAAAGTGACAATAAGGAGGACCAGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCATGCTTAGTTACCTATGGAAAATTAATGTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAGCAGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATTCCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MGMRRGSGGAGADQEGGVPMGGSRGSGDAGTNKEHGVPMGGRRGSGGACADQEGGIPMGGRSGGSGAGVGLDWVWDWRNPNRSVPPPPTEDIPAVPGSSGVLPLSNLQRHSEKLSDTHGSDKEDEVVDSSDDDCDPYFNYLVDSFMTATKAQPKQLYGNIDLVAAAQRQSNEYASSALDYYNKDENNKIQYSLIKALKSSTIREKGEKYGHVNFIASLDSKEELFFAEVCWDPKNYDMVPTCIVSLEEKRRIGGRSFINDEYVVCLDLQNPPIDGKHCYGCSEEIKHPEDGSTFKAGHVAATGAGEIQGGGFPAMVKDTAYYDTLGVSVDASPAEIKKAYYLKAKQVHPDKNPGNPDAAQKFQELGEAYQVLSDPSKREAYDKHGKEGLPQDNMVDPAAVFGMLFGSDYFEDYVGQLALASIASVEVEENLNGQEARGKVQEKIKELQKEREQKLIQSLKDRLQPFVDERKDEFVNWANGEAQRLSHAAFGEAMLTTIGYIYVRQAARELGKSKLYMGVPFIAEWVRDKGHCIKSQVNAASGAIALMQLQEGMKKMEESDNKEDQIMKSFEEKKDAMLSYLWKINVVDIESTLTHVCQAVLKDASVPKDVLKLRARALKKLGTIFQGAKSLYHRENSLQVETSPRQGAATSN</aaseq>

Gene Sequence

<dnaseqindica>1..245#328..408#1258..1495#2105..2297#2376..2525#3710..3831#3987..4046#4541..4623#5041..5203#5322..5451#5712..5870#5948..6120#6246..6326#6838..6918#ATGGGTATGAGGAGGGGCAGTGGTGGCGCTGGCGCTGACCAGGAGGGCGGCGTTCCGATGGGTGGGAGTAGGGGCAGTGGCGATGCCGGCACTAACAAGGAGCACGGCGTTCCGATGGGTGGGAGGAGGGGCAGTGGTGGTGCCTGCGCTGACCAGGAGGGCGGCATTCCGATGGGTGGGAGGAGTGGCGGTAGTGGTGCCGGCGTCGGCTTGGATTGGGTGTGGGACTGGCGTAATCCCAACAGGTAGAAAATTCTTCCATCAACACTGAAATGATTATTGTTGGTACCAGTGACCAAGCCTGAAATGATATGATTGATTGCGCAGGTCTGTGCCGCCACCACCAACAGAAGATATCCCAGCTGTCCCAGGAAGCTCAGGAGTACTACCTCTCTCCAATCTCCAGAGGTATATATGTCACTCATTTCTACTTCTAGTTATCTCTATCGACATATGTACATCTTCTAGTTACCACTATCTACGCAGATTCATCTAATCAACAATTTTACTCTAACAATATATAGAGTAAGAATGGGGCGATGTTGTACCTATCTCTATCTGCACAGGTTCATCTAATGAACTAGGTTATATAGAATAAGAATGGGGCGATGATGTTTTTACCCAACTTAATTTGGTGCTCAATCATGATTATGTCCTCCTTTTTCTTACTTTGTGATTTTGTCCCTGTTTTTTTTTCAAATCGAAGCTACCTTTTGCCCCTAGTTCAGACTTATGTTAATTACGAAGTACTATATGAAATGTTTATTATCGGTACCAACGACCTGACCTGAAATGATTGATTGCAGCAAAAGACAATATTTAGTATCATCTCTGATGCTGCTATCATCTCTGCCTCTCTCTGATCTCCAGAGGTATATATGTCACTCATCTCTACTTCTAGTTATCTCTATCAACATCTGTACATCTTCTAGTTACCACTATCTGCACAGATTCATCTAATAAACTATCGTCCTAACACTATCGTAGGGTAAGAACACTAACACCCTAACAAGAATAGGAGTCCAATTTCTTTTTTTTTTCTTTTTGTAATTTACACTCCCTCGTTGTATGGTGTTTAGACAACAAATACATGCAATGCGCACCAAGTTATCAAGTTTTAAAAATAAGGAAAAGGATTAGTTAATTAATTATGTGTATAGTTATTTTTCTTTTGTGCACACCTATAGTTTCATTGGTGTGTATGTTTATAGCTTTGCATTTGGTTAGTCTAACATTTTAAAATTCTGTTCAAATTAGGCATTCTGAGAAATTATCTGATACACATGGATCAGATAAGGAAGATGAAGTGGTGGATTCTTCAGACGATGATTGTGATCCATATTTTAACTATTTGGTTGATAGCTTTATGACTGCAACTAAAGCTCAACCAAAACAGTTGTATGGCAATATTGATCTTGTTGCAGCTGCACAACGTCAGTCTAATGAGTATGCAAGTAGTGCTTTGGATTACTATAACAAGGATGAAAACAATAAGGTAAAATTTTGTTCCCCTTGATTGATTTGAGATGATGGTTCGCGTACGTGGATGCTTAAATTAAATCTCTGTCTAATTAAAATTATATGTTTACACTATATTAATACTTGGTCCTTAGATTATACACTAATGTGATATTGTAACCTTATAGTGATTTTAAATGGTGGTGTCACATATACGGATGCTTAATTAGATGAGTGGTTTTAAACTTCTAGCTAACTAAGATGCTATATTGCACTATATCATCCTCGGACCTCAATATATACTCTAGGTTATAATAGCATTGTATTGATACTAGGTTGTTGATATGTGAGAGAGAAAAAGAGATTTTCTCGATAAAAAAGGTTTTAAGAGGAGATTTTGATATATTTGTTTAATATATATGTCATGTAGCTAAAATCATCCTATTTATATGCAAAATTATACCAGTTTGCCCACCTTAGGAGACCATATCCTAAAGTTAGATGTCTGGTTTCAAATTTTGTGGTGCTAGATGGACTTCCACTTTAGGTGGGTATATTGACTGTTTCCCTTTTTAACATTTGTACTAAAATGTCTTGCTCGTTTCACAAGTATTTGATTCATTTTTTGTTATTTGCAATGTGTTAGATTCAATACAGCTTAATCAAAGCCTTAAAAAGCAGTACAATTAGAGAGAAGGGTGAGAAATATGGACATGTCAACTTCATAGCATCTTTAGATTCAAAGGAAGAGCTATTTTTCGCCGAAGTTTGTTGGGATCCCAAGAACTATGATATGGTGCCGACCTGCATTGTATCTCTTGAGGAGAAAAGGAGAATTGGTTAGTATGGAATCACTGGTTAAAGTTCTTTGAACCATGTAATTATTATGTTCCTAATCCTAATTCTGTTAATAACAGGGGGACGCTCCTTTATTAATGACGAGTATGTGGTGTGTCTGGATCTCCAAAATCCGCCTATAGATGGCAAGCACTGCTATGGATGTAGCGAAGAGATTAAGCACCCAGAAGATGGATCTACGTTTAAGGCCGGGCATGTAGCCGCCACCGGTTTTTATGATTCTTTCATGTAGCTGCCATCAGTTACTATTCTTTCTTCCGAGTTTGTATAAAAGCTCAACTAATCTACCCTTAACAGCTGTTTTTACTGTTCTATTTATTTTGCATCTTGTCTACACTAGCAGACTTATTTTGTGGCTATGAATGGATGAATATGCTGCGTTATGTATACAGAGTTGAGGTGAAAGCTTTGAATGGATTACGATATTATAAATCATACAATATCATATTACTAAAAAAAGATCCATCCCGTTCATTATGAAAGAAACAAAAAATTTCCATGGGACATGGACTATGGTGAAAATCTGACAAAAAATCACGTGATAATGTTGTGTTTGGTTCACACTAAAATTGTAAATTTTGTTGAAATTGGAACGATGTGATGGAAAAGTTAAAAGTTTATGTGTGTAGAAAAGTTTTGATGGGATGAAAAAGTTAGAAATTTAAAGAAAAACTTTGGAACTAAACACGGCCATCATCATGGTTTCATGCGTTTGATTTCTGGAAGTCTGAACTCATTAAGAACGCGGTTATTTATATTAGGATAAAGCACCAGAGATTTGTTAGCCCTGTCGCTCGAGTTCATCCGCGTATGCTTAGCCGCGTGCTGTCGCGTGTCGCCATCGCTGCGCCATCGGAGAAGGAAACAAACACTGATTAAATTAAATTAAACACTGAGAAAATTCCTCCCCAACTTCTTCTCGCAAACCACCTCTTTTATATACCCCCAATTCACAACTCTGAACATCACAAATTCATTTCACAAGTTCAGAGCTCCCTGAACCTGAAATCTGTTCGAAACAGAGGCCCTCTCAAAATTCTCAATCTGCCACCGCATCAACGAGGTGGGGCCCAGCCTCCGTGACGTCACGACACTGACTTGGTGGGCCCACCTATCAGGCCTGTCCACGTTGACCACATCGCGTCACACCGTCCACGACTTTTTTTTTTCCCCTGATTCCCTCGCAGCCAGGGCACCACTCCTTCTAGAGGAAAAGGATCGATTTTTTTTCTTCCCCAATTTCTTCCTGGTGCTCACCTCCTCCTCCCCCGGGATCTTCCAGAAGCTTCCAGAACTGACCTTGGTAAAGAATCTTTCTCTCTCTGGCTTTCTTGGTGGAGGCTTGGTTTCTCTGTTGGTTTCTCCTGGTGTGATTGGAGGTTGGCGTTTGCAGGTGCGGGCGAGATCCAAGGAGGAGGGTTTCCTGCCATGGTGAAGGATACCGCGTACTACGACACCCTGGGGGTCAGCGTGGACGCCTCCCCCGCCGAGATCAAGAAGGCCTATTACCTCAAGGTGAATTCCTTTTTGCGCCTTTGATTTCTTCATCTTTTTTTTTTCTTGATTGATTGATTTCGTGTGTCGTCATCAATGTAGAATTGCAGATAGCTATTGGCCTATTGAGCTAATCTTCGTGTGCCAAATTGATTTTTTTTTAATCTCTCTTCCAGGCGAAGCAGGTGCATCCGGACAAGAATCCTGGGAACCCCGATGCGGCGCAGAAATTTCAGGTAGTTTTTTTTTCTTTTTCTCCCGTGCCTTCTGTTGATATCTGTGATTCTGTGCTAGTAATTTGATTTGTTGGATTTGATTGTGGAATGAAAAGTAAGACTACGTGTTCACAAAAACATGTTTTTTCTTTATGAATTGGAATAGTTTACTGCAAGTGTCAAAGCTATGCTATAGCTAGAAGAATGTGAATAGGCTGGAGTTTGCTTGATTTTTACCAAGTGATATCAGATTTTTGCAATGCAGCGCATGTGTTACTTGTTAAGAGGCATAGTTTTATCGTCGGAGATGCCATGATTTTCAGTATGAGCATCTTCTGGGTGTTAAGAGGCAGAGTTTTATCGACAGAGATGCCAGTATGTTTTTTGAGCGGAATGTTTGGTTGTTTGGTGTATATACATTGAAGCTATTGTGTTGATTGTCTATTCGGCATCAAATGCCTGCTTAAATTATTTCCCTCTATGAATTATTGAATTAAATAGCTTGATGTTAACAGGAACTCGGAGAGGCATACCAAGTTTTAAGCGATCCTTCAAAAAGGGAGGCTTATGATAAGCATGGAAAGGAGGGGCTTCCTCAGTAAGTCACGAATTTTTTTTATGTCTGGTAAACAATGGGTGTTCTTCTCAAAAGATAAAAGGGTGGCAACTAAAAAACTGTTTAATCTTTAATCTGAACAAGTGTGCTGAGAATATAGAGCGGGCCAATTTGGTAAATTAATTGCACAGTGCAACAAGAAAATTGGAGTGTATTCAAATGACCTGTCAATTTCTATGGGTTGATACTTGGTAGATCACTATTTCCTTAGCTATAAAAGCACATCTGTTTAAAGGAAAAGGAGACTTCTCTAGGCACGTGATGAAATTCAAACAGTCAGTTATGGAACACAATATTTTCAGTTAAGATGATATTTATAGTTCAATAGAAACTAAAGAAATTATGCGTTGTGCTGTACCCTTTAAGTTGGCGTCTTACACATTTTACACGGCATTTCAGGGATAACATGGTGGATCCTGCTGCTGTCTTTGGGATGCTTTTTGGAAGTGACTATTTTGAAGATTATGTTGGACAGCTTGCACTGGCATCCATAGCATCAGTGGAAGTCGAGGAAAACTTAAACGGTCAAGAAGCAAGAGGGAAGGTTCAAGAGAAAATTAAAGTATGTTACTCTCGAAGTTCCCTACTGTTTTGCTTAAATAGTTTCATTAAAGTTAGCATTCCACTTAGGCTCTAGGATGCTGAGACACAAATTAAAACTAAAACTTCCTGTGTGACAGGAGTTACAAAAAGAAAGAGAACAGAAGCTTATTCAGAGCCTAAAAGATCGACTTCAACCATTTGTGGATGAGAGAAAGGATGAATTTGTTAACTGGGCAAATGGGGAAGCTCAGCGGTTATCCCATGCAGGTACATCATGTGATTGTGTACTACTTTGTTTTTATTTGAGAGGGCTATATGCTTTCTGCAGTCACTTTTACTTTGTTTGATAAATCAGTTGCTTTCACCAGCAGATTGGCAAATTGGATATGATTACATCCACATAGACATAGATTTTGTGGGGTCTTAATTTTAAAACAAATTGTATAGAACTCATCGTTGCACGTTCCCTAATTTACTTTATTCATACGAGTATTTTACCATTGGCTTATCAAATGAATATTTTTCAGCTTTTGGCGAGGCTATGCTCACCACTATTGGCTATATTTATGTGCGACAAGCAGCGAGAGAACTTGGAAAGAGTAAGTTGTATATGGGTGTACCATTCATAGCTGAGTGGGTCAGAGACAAGGGCCACTGCATTAAATCACAGGTTAATGCCGCTTCAGGTACACCCCGAGACACTGTTTTGTTTCTGGTGCAATATACGATGCAAGTACTCCTTGATAATTAGCTCCTGTTGCAGGCGCTATCGCTCTGATGCAGCTACAAGAAGGGATGAAAAAGATGGAGGAAAGTGACAATAAGGAGGACCAGATTATGAAGAGTTTCGAGGAGAAAAAAGATGCCATGCTTAGTTACCTATGGAAAATTAATGTGGTTGATATTGAGTCAACACTTACACATGTTTGCCAAGCAGTAAGTTTTTGCGTATCCTTGTTAGTGGAAGAAGGCTTGCATAGTAACAATTATGCACTGTGCACGTCAAAGAAGAAAGAACTAGAAACATATGAGTTACTTTTGTGTAATCTTCTACCTTACAGGTTTTGAAAGACGCCAGTGTCCCAAAAGATGTTCTGAAGTTACGAGCAAGAGCATTGAAAAAGCTTGGGACGATATTCCAGGTAAGCTTATGTTAACGCCTTCTGCCTGTTTCAACCAAGTACTCATGGAAAAACCACATCAGATCTGCAAATGTCCTTTGTCTTATACTCTTATGCATGGCCATGGATGGACGATTGGCCAATATGCTTACTCTCTATGTAACCGTGCATCAAACCAAACAGCCAAAAACGAACCATTGTTGATTCACTGTTTCAATATTATTGATCATCAGTTGAAGTTTTGCGCATGAACCATCATAGATGATCAGTTATGCATAAAAGACCTCTAATCAACTAGTTCCAATATATAAGCTATGCATATGTGAGTCTTACCTCATATATATCGTACTAAAACAATAGAAGCAGTGGATTAATCCAGATTTCATACTTGTAGTGTCTTTCCTGTTGCAGTATCTTCTCATGTGTTCTTGTTTTGTAGCATCTTATCTCGAGTGAGTTTGATAGCAGTGCATAGGTGACAGAGCACACGATGATTATATTCACATGGGTTGTTTTTTAATGTAAAAATCAGGGTGCGAAGTCTCTGTACCATCGTGAAAACAGCCTACAGGTGGAAACCAGCCCACGGCAGGGAGCAGCAACATCGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017636