BGIOSGA017637

From RiceWiki
Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017637| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017637, complete gene.| tag = OJ1288_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017637

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017637, complete gene.

LocusTag

OJ1288_A07.10

Ensembl Transcript ID

BGIOSGA017637-TA

Ensembl Protein ID

BGIOSGA017637-PA

Length

2867

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28346425..28349291

Sequence Coding Region

28349142..28349291,28348492..28348516,28348286..28348401,28348116..28348202,28347853..28347969
,28347674..28347762,28347445..28347496,28347250..28347345,28347114..28347158
,28346922..28347011,28346780..28346851,28346425..28346553

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28346425..28349291 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28346425..28349291 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGAATGGGAGCGCCTGCGGCGGAGGCGGCGTGGACAAGGAGAAGGAGGAGTTCAAGCAGATCTACGGGGTGCTCAAGGAGGAGCTGCTCAGGGACCCCGCCTTCGAGTTCACCGACTCGTCGCGGCAGTGGATCGATCGCATGTTGGACTACAATGTACCTGGAGGGAAGTGCAATCGTGGTCTCTCTGTGGTCGATAGCTATAAGCTGTTGAAGGGCACCAATGTTCTAAGTCAGGAAGACATGTTTCTCGCGAGCACTCTTGGTTGGTGCGTTGAATGGCTTCAAGCTTACTTTCTCGTGCTTGATGATATCATGGATGATTCTCACACTCGACGTGGTCAGCCTTGTTGGTTTCGGGTGCCTCAGGTTGGCTCCATTGCTATCAATGATGGAGTTATCCTTCGCAACCATATCACGCGAATGCTTCGGCTCCACTTTAGAGGAAAACTTTACTATGCTGATCTCCTTGATTTATTCAATGAGGTCGAGTTCAAGACAGCTTCAGGTCAATTGCTAGACCTTATCACTACTCACGAGGGAGAAAAAGATCTAAACAAATATAACATAGGAGTTCACCGCCGCATTGTTCAATATAAGACATCCTACTATTCATTTTATCTGCCGGTTGCTTGTGCACTGTTGCTATCTGGAGAGGACTTGACCAAATATGGTGCTGTAGAAGACATTCTTGTTAAGATGGGAATATACTTTCAAGTCCAGGACGATTATCTAGATTGTTATGGTGACCCCAAATTTATTGGCAAGATCGGGACTGACATTGAAGATTACAAATGCTCTTGGCTAGTTGTGCAAGCCCTTGAGCGTGCTGATGAGAGTCAAAAGAGCGTTCTATTTGAAAATTATGGAAAGAAAGATCCAGCCTGTGTGGCAAAAGTGAAGAGCCTCTACAGAGAACTAAACCTAGAGGCGGTCTTTCTGGACTATGAGAACGAGAGTTACAAGAAGTTGATTGCGGATATAGAAGCCCAGCCAAGCATAGCTGTTCAGAATGTTCTGAAGTCCTTCTTGCACAAGATCTACAAGAGACAGAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAANGSACGGGGVDKEKEEFKQIYGVLKEELLRDPAFEFTDSSRQWIDRMLDYNVPGGKCNRGLSVVDSYKLLKGTNVLSQEDMFLASTLGWCVEWLQAYFLVLDDIMDDSHTRRGQPCWFRVPQVGSIAINDGVILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVHRRIVQYKTSYYSFYLPVACALLLSGEDLTKYGAVEDILVKMGIYFQVQDDYLDCYGDPKFIGKIGTDIEDYKCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKSLYRELNLEAVFLDYENESYKKLIADIEAQPSIAVQNVLKSFLHKIYKRQK</aaseq>

Gene Sequence

<dnaseqindica>1..150#776..800#891..1006#1090..1176#1323..1439#1530..1618#1796..1847#1947..2042#2134..2178#2281..2370#2441..2512#2739..2867#ATGGCGGCGGCGAATGGGAGCGCCTGCGGCGGAGGCGGCGTGGACAAGGAGAAGGAGGAGTTCAAGCAGATCTACGGGGTGCTCAAGGAGGAGCTGCTCAGGGACCCCGCCTTCGAGTTCACCGACTCGTCGCGGCAGTGGATCGATCGCGTAATGCTTTTCTCCCCCTCTCCTTTTTCATCTTGTGTTGCTGACCGCATGTGTTTCTGCTCCCGGATCGTTTCTTCCGGATTTTCAGTAGGGTTTAGATCGGGTAAATGATTGGTGGAACTGCAATTAATTTAGTCGCAGCACGTGCAGGGGTTCGCTTGTAAATTCTGGATCCTCAGTTATTAGCATTGAGTGATTAGGCCTTTTTGGGAGGTTTAATCTTGGTTAAATAACTAGTAGTGTTATGTTGGAGTGAATCAGCAAGTGCAGTAAAGGTTGGCTCAAAATTCCCTTTTGTTAAATGAGCTGCTCCAATTCTGTCTCCATGTCAAAAGGAGAAAAAATAATAATGCTCACATTTGGAAGGCAAAAATGTGATATTTTGGGTTAAGTGAATTCTTGGGGTGATAAAGCGTATGATTATTAAACCTTGGCCTACTGCTTAACCATAGATGGATCATGGATGGTCGGCTTAGTCGCCTACTGCTTTCTCCATTTGCTACTTTTTTTATTATATATAATGTAAAGCTTCACAATAGATTGGGTGTACGACAGATGATCTTATCAGTTAAATTGTCACTGTTGGGAACTGCTCAATTTAACTTGTTTATTTTCTTTGAAGCAGATGTTGGACTACAATGTACCTGGAGGTGAGATGGATTTGACTTGATTAGTCTATAACATATGAGTAAAAAGTAAAAACACACTAAATCTCCAACCTATTGTCTTTGATATGGTAGGGAAGTGCAATCGTGGTCTCTCTGTGGTCGATAGCTATAAGCTGTTGAAGGGCACCAATGTTCTAAGTCAGGAAGACATGTTTCTCGCGAGCACTCTTGGTTGGTGCGTTGAATGGGTAATGCTTTAACCTCAACTTTCCGAATAATGGGTGCAAATCAACTAAAATTGCTCCTCTAAGCTTTACTGTTGTCTATGTAGCTTCAAGCTTACTTTCTCGTGCTTGATGATATCATGGATGATTCTCACACTCGACGTGGTCAGCCTTGTTGGTTTCGGGTGCCTCAGGTTGGTGAATCTGAAATTGTCCTATCTGAATGGTGCATTGCCTAATTATTTACTGAAACAAAACACTCATTTTACTTTATAGTACCTTTCTTTCACTTGTTACATATGAAACTTTATCCCTTGTGCCGCCATTTGTTGCACAATAGGTTGGCTCCATTGCTATCAATGATGGAGTTATCCTTCGCAACCATATCACGCGAATGCTTCGGCTCCACTTTAGAGGAAAACTTTACTATGCTGATCTCCTTGATTTATTCAATGAGGTAATTTTACATTCTGATCTACATACACGGTTAGTCTGAACTTTCAGATCATTGTGGTCTTACTGCTACTATCTTGTTTTGCTTTCCTAGGTCGAGTTCAAGACAGCTTCAGGTCAATTGCTAGACCTTATCACTACTCACGAGGGAGAAAAAGATCTAAACAAATATAACATAGGAGTGTAAGTCAACGTTGTAACAGCTTTGGAAATAACTATTTTGCATGCTTTATTTAATCTATTCTTAGAACCATAAGCCTAATGTTTCTGTCATATATGGAATGGATTGGTTTTATCTATTATATCTTCAATAATTTTGATTTTGAGATTGTTGATTCAAAACTTCCTGTATTTTTGCAGTCACCGCCGCATTGTTCAATATAAGACATCCTACTATTCATTTTATCTGCCGGTAAAATTTATATTCCATTGCCATATCTTCGTTTATGCAATCCTTGTTTTGTTAATAAATACTAATTGCGAGTGGTACTGATATGCTGTTATATCAAAGGTTGCTTGTGCACTGTTGCTATCTGGAGAGGACTTGACCAAATATGGTGCTGTAGAAGACATTCTTGTTAAGATGGGAATATACTTTCAAGTCCAGGTAACTCCTATTTCTGCCACATAACAACAGGAGGAATTTGGCTGCCACGAGTATTATTCTACTTTCAATTAATACGAATATTTTCTTACAGGACGATTATCTAGATTGTTATGGTGACCCCAAATTTATTGGCAAGGTTAGTGGATTTACCTGTTGTAGCAGCATAGATGAACATCAATATCTATATTGATATTTGTTTAGCTCTTGTAGTTTGATCATTTTTTATGTCATATTATAGATCGGGACTGACATTGAAGATTACAAATGCTCTTGGCTAGTTGTGCAAGCCCTTGAGCGTGCTGATGAGAGTCAAAAGAGCGTTCTATTTGTAAGCCATCTCCATAGTCTTTTGTGATGCTGTGAAGGTTGTTGTCTAAACACTTGTTCTGCTCCTACAGGAAAATTATGGAAAGAAAGATCCAGCCTGTGTGGCAAAAGTGAAGAGCCTCTACAGAGAACTAAACCTAGAGGTTTGCCTTGACTCTATATGCTTTATATGTTTCTTCATGGGGTTTACCTTATTGTCAAAAGAATCTTACTCTCTTGTAAATTATGATTTCTACAGTGGATGTTCCTGCTTTGTATTATCATGGCCTACTTGTTTAGTTGCTCTACCTAGTCTGAATTTCGACATCTCCAACCATTATATTGGGTTCATAACCAAGTCTGATATCTTGTTTATTACTTCATTCTTAGGCGGTCTTTCTGGACTATGAGAACGAGAGTTACAAGAAGTTGATTGCGGATATAGAAGCCCAGCCAAGCATAGCTGTTCAGAATGTTCTGAAGTCCTTCTTGCACAAGATCTACAAGAGACAGAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017637