BGIOSGA017638

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Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017638| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017638, complete gene.| tag = OJ1288_...")
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Gene Name

BGIOSGA017638

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017638, complete gene.

LocusTag

OJ1288_A07.7

Ensembl Transcript ID

BGIOSGA017638-TA

Ensembl Protein ID

BGIOSGA017638-PA

Length

2721

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28332648..28335368

Sequence Coding Region

28335237..28335368,28335006..28335155,28334841..28334903,28334560..28334736,28334368..28334471
,28333683..28333790,28333480..28333576,28333292..28333389,28333052..28333193
,28332839..28332961,28332648..28332746

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28332648..28335368 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28332648..28335368 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGGGCGGTGTCGGCGCTGTTCCTGCTCGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCGCTCCAGGCCGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGAGCGACGCGGAGGTGCTCTCCCCCGTCGTCCACGATGACGCCGGCGTCTCCTACATGTTCATCCAGCACAACAATGTGTTCCTCCTCACCGCGTCCCGTCAGAACTGCAACGCCGCCAGCATACTCCTCTTCCTCCACCGCGTCGTCGATGTGTTCAAGCATTACTTCGAGGAGCTGGAGGAGGAATCATTGAGGGACAACTTCGTCGTTGTGTATGAGTTGCTTGATGAGATGATGGATTTCGGGTACCCACAATACACGGAAGCAATGATCCTGAGCGAGTTCATTAAAACGGACGCGTACAGGATGGAGGTCACTCAGAGGCCGCCCATGGCAGTGACAAATGCTGTGTCATGGAGGAGCGAGGGGATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTGGTGGAGAGTGTCAATATCCTCGTTAACAGCAATGGGCAGATAGTGAGGTCTGATGTCATCGGTGAGCTGAAAATGCGAACATTTCTAAGTGGAATGCCCGAGTGCAAACTGGGGTTGAATGATAGGGTTCTCTTGGAGGCTCAAGGCCGAACAACTAAAGGAAAAGCAATAGATTTGGACGATATCAAATTCCATCAGTGTGTTCGGTTGGCCAGATTTGAGAATGACAGGACTATATCCTTCATTCCTCCAGATGGATCATTTGATCTGATGACTTACAGACTTAGCACCCAGGTGAAACCTCTTATCTGGGTAGAAGCACAAGTGGAGAAACATTCAAGAAGTCGGATACAGATCACAGTGAAGACAAGAAGTCAGTTCAAAGAAAGGAGCACAGCAACAAATGTAGAAATTGAAGTACCAGTGCCTGAGGATTCGACAAACCCAAATATAAGAACTTCAATGGGCTCTGCGGCATATGCACCTGAGAGAGATGCGATGGTCTGGAAAATAAAATCATTTCCTGGTGGCAAGGAATATATGTGTAGAGCAGAATTTAGCCTTCCAAGCATAACATCAGAAGATGGAATGCCTGAAAAGAAGGCTCCGATACGTGTGAAATTTGAGATACCGTATTTTACCGTGTCGGGTATTCAGGTTCGCTATCTGAAAATCATCGAAAAGAGTGGATATCAGGCCCTTCCTTGGGTTCGATACATCACAATGGCTGGTGAATATGAGTTGAGACTCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAGAVSALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEAMILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNILVNSNGQIVRSDVIGELKMRTFLSGMPECKLGLNDRVLLEAQGRTTKGKAIDLDDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAQVEKHSRSRIQITVKTRSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAAYAPERDAMVWKIKSFPGGKEYMCRAEFSLPSITSEDGMPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI</aaseq>

Gene Sequence

<dnaseqindica>1..132#214..363#466..528#633..809#898..1001#1579..1686#1793..1889#1980..2077#2176..2317#2408..2530#2623..2721#ATGGCGGCGGGGGCGGTGTCGGCGCTGTTCCTGCTCGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCGCTCCAGGCCGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGTAATGCAATGCCCCCTCCATTTCACCTAGATCTGTGCAAATGCCGGGCTTCTCGATGAGCTTTTTGCCCTGTGTGATCAGAGCGACGCGGAGGTGCTCTCCCCCGTCGTCCACGATGACGCCGGCGTCTCCTACATGTTCATCCAGCACAACAATGTGTTCCTCCTCACCGCGTCCCGTCAGAACTGCAACGCCGCCAGCATACTCCTCTTCCTCCACCGCGTCGTCGATGTATGGGTTGCTGCCCCCATCTTCACAGCAACATTCTGCGTTTGTTAGTATGGACAATGCCATTGGATTTTGTTCATATGATTTGTGTGTGTGTGGGCGTAGGTGTTCAAGCATTACTTCGAGGAGCTGGAGGAGGAATCATTGAGGGACAACTTCGTCGTTGTGGTATGTGCGCTTGCGTGTTACGTGAACTGAGTACTGGGTCTGGTTCAATCGGAATTGCCGTGTCACTGAAATTGGAGGGTTGATGTCATTTGCTGTGTGTGTAGTATGAGTTGCTTGATGAGATGATGGATTTCGGGTACCCACAATACACGGAAGCAATGATCCTGAGCGAGTTCATTAAAACGGACGCGTACAGGATGGAGGTCACTCAGAGGCCGCCCATGGCAGTGACAAATGCTGTGTCATGGAGGAGCGAGGGGATTCGGTACAAGAAGAATGAAGTCTGATACACTACACCTGTATTTTTATTTTTTTGGTTCACATGAACGTGTGATGGATTTAGAAAATTATCAACATTTTGTGCTGCAGGTGTTCTTGGATGTGGTGGAGAGTGTCAATATCCTCGTTAACAGCAATGGGCAGATAGTGAGGTCTGATGTCATCGGTGAGCTGAAAATGCGAACATTTCTAAGGTAGTAACTGCATGGTCATTCTCATATCACAAATTCACATTGTGCTGATAACTCAGCTGCTTCAGTAATAATTTAATGGGAGTTGCAGTTAGAGGGATGCGAAACACTGTTTTTATATGATGTATCCAACCCATTATTGTGAACTTCTAGTTTAACTGTTTATCACATCACTGAAGCAAGTTGATATTGATGAATAAAGACTATTAAATTGTGTATACAATATTCTGCCAACTATGAGTCTATGACATATATGTTGCAACCATGTCAAATAAATGTAGGTAATGTAATTCTCATCCAGATAATAGCATCAAACAGTACATAAAAATGAACTTTGTTGCAGTATGTAATAATGCTCTAATTGGACTAGTCATTGACCTGACTAGTTTGTATTTCAGACTATCTGTTGGATTGTCCAAGATATCGTTAGACTATATGTTTCCCAAGTACCCAGTTACGTTATGAATGCTAAGTGGACTAGCCATTGATCTGACTAGTTTGTTTTTCAGACGATCTGGTAGATTGTCCAAAATATATGTTCAACTTATGCATCATAGCTAATATCCATCTGCTTGTACAGTGGAATGCCCGAGTGCAAACTGGGGTTGAATGATAGGGTTCTCTTGGAGGCTCAAGGCCGAACAACTAAAGGAAAAGCAATAGATTTGGACGATATCAAATTCCATCAGTAAGATACTAACATACAGTATAACTATGATGGTTCTTTATCAAATGTAATTCATTTCTATTACATCATCCATGTTACAACTCTGAATTGGCCAAACCTTCGTTAGGTGTGTTCGGTTGGCCAGATTTGAGAATGACAGGACTATATCCTTCATTCCTCCAGATGGATCATTTGATCTGATGACTTACAGACTTAGCACCCAGGTTTGTCCCTGCTTGATCTTTGCTGCTAGTATAGCGCTAGGTTATGATCTATATTTCACCTAATCTATCTTCCTCTGGTCCGTCCCACAGGTGAAACCTCTTATCTGGGTAGAAGCACAAGTGGAGAAACATTCAAGAAGTCGGATACAGATCACAGTGAAGACAAGAAGTCAGTTCAAAGAAAGGAGGTGTTATTTTATTTTATTTTCTTAAAAAAGCGATAATGTCTCTGCATCAGTGTCTTAGTTCCAGACAAGTTACTGTTATTGTTTTTTCTCATTTCCAGCACAGCAACAAATGTAGAAATTGAAGTACCAGTGCCTGAGGATTCGACAAACCCAAATATAAGAACTTCAATGGGCTCTGCGGCATATGCACCTGAGAGAGATGCGATGGTCTGGAAAATAAAATCATTTCCTGGTGGCAAGGTAAGTGCTGAGTTGATACCAACTTACCACTTTGCCTTTCACTTTTGTGCTATGTCCATCAACTCTAATTTCCTAGAATCTCTCCATTAGGAATATATGTGTAGAGCAGAATTTAGCCTTCCAAGCATAACATCAGAAGATGGAATGCCTGAAAAGAAGGCTCCGATACGTGTGAAATTTGAGATACCGTATTTTACCGTGTCGGGTATTCAGGTAACATACCAAATTATGTTGCACATCTCTTACCACTATGTTTGGAACTTCCTTTGGTATCCTACTCCTTTATTGACTTTGTGCTTTTGCAGGTTCGCTATCTGAAAATCATCGAAAAGAGTGGATATCAGGCCCTTCCTTGGGTTCGATACATCACAATGGCTGGTGAATATGAGTTGAGACTCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017638