Os09g0352400

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0352400| Description = Similar to Bystin| Version = NM_001069493.1 GI:115478728 GeneID:4346824| Length = 4344 bp| Definition = Oryza sativ...")
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Gene Name

Os09g0352400

Description

Similar to Bystin

Version

NM_001069493.1 GI:115478728 GeneID:4346824

Length

4344 bp

Definition

Oryza sativa Japonica Group Os09g0352400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11802320..11806663

Sequence Coding Region

11802549..11802625,11802774..11802846,11802959..11803031,11803321..11803467,11804077..11804124
,11804199..11804278,11804674..11805001,11805087..11805138,11805959..11806085
,11806175..11806552

Expression

GEO Profiles:Os09g0352400

Genome Context

<gbrowseImage1> name=NC_008402:11802320..11806663 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11802320..11806663 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgggaagaagcgcaagtccgcctcctccgacaagcagccgaagcagcagcagcagcggctcccactcggcgccgacgccgacgcggtcgccgacgcggcgaagcgccgccgctcgggggcgtcgaagaagcaccaggcggaggaggaggcctccataccttcctccctcagcgccaagatcctccgcgaggcgctcacccagcaacaggaggagtccctcgccgaccagcgccccgccgccgccgccaccgccgctccgtccccatccttctccttccccgtgcccaagaaagatggcgaggaggacgaagacgatgatgacgtcgacgagttcgatggcttcgacgcgcagagcgagtacgacggaggcgtgccggagattgatgaggaggacgagaaggctctcgctgcattcatgtcaaaggacacctcttcgaagcgctcacttggtgatatcattctcgagaagatcagggaaaaggatgcagaaatctcaacagaaggacggactcctgtgaagttggactccagtattattgaactttataaaggggttggggagttcttgagccgatacacaagtgggaaaattcctaaaggattcaagcgtatcccatcattggaatgctggccagatgttctgcagctgactgagcctgaaaattggtctcctaacgcagtatatcaagcaacacggctcttctcttcaaacatgaacgcgaagaacgctgtgcgattctatgaagctattttacttcctcgtgtccgtaatgacataaggaagaacaagaggcttcattttgcactataccagtctctgaaaaaatgcctgtacaagcctgcagcgtttttcaagggaatattgttgccgctgtgtcaggaaaggaattgcactctgcgggaagctgtaattattggtagtatcatctcgaaagtctccattcctcctctccatgccagtgcagctttaatgaaactagcagagatggagtactgtggcacaactagctactttattaagctatttcttgataagaaatatgctttgccatatcgtgttgttgatgcggtttttgctcatttcatgcggtttattgatgaggagagggtcatgcctgttatatggcatcaatcactcctagcctttgtggaaagatacaagaatgaattagagaaaaaggacaaggagaaacttgcacgcttgttggatcaccagaagcactatttggttactccagaaattcgtagggaacttcggatgagctgcaacaggggtgaaaaggacacaatcatgtcgatatgctccccagtttctgtgatcacgaaaccaattgaagaagacaggtggaatgttccggaagtacctatggaggagtaa</cdnaseq>

Protein Sequence

<aaseq>MAGKKRKSASSDKQPKQQQQRLPLGADADAVADAAKRRRSGASK KHQAEEEASIPSSLSAKILREALTQQQEESLADQRPAAAATAAPSPSFSFPVPKKDGE EDEDDDDVDEFDGFDAQSEYDGGVPEIDEEDEKALAAFMSKDTSSKRSLGDIILEKIR EKDAEISTEGRTPVKLDSSIIELYKGVGEFLSRYTSGKIPKGFKRIPSLECWPDVLQL TEPENWSPNAVYQATRLFSSNMNAKNAVRFYEAILLPRVRNDIRKNKRLHFALYQSLK KCLYKPAAFFKGILLPLCQERNCTLREAVIIGSIISKVSIPPLHASAALMKLAEMEYC GTTSYFIKLFLDKKYALPYRVVDAVFAHFMRFIDEERVMPVIWHQSLLAFVERYKNEL EKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEKDTIMSICSPVSVITKPIEEDR WNVPEVPMEE</aaseq>

Gene Sequence

<dnaseqindica>4039..4115#3818..3890#3633..3705#3197..3343#2540..2587#2386..2465#1663..1990#1526..1577#579..705#112..489#aatcccccacttttcccgactcctctccttcccggcgccatcgcctcctccctcctcccgccgccggcgccgccgcctcgcctcgcctctcctcgctcatcggcgctagccatggccgggaagaagcgcaagtccgcctcctccgacaagcagccgaagcagcagcagcagcggctcccactcggcgccgacgccgacgcggtcgccgacgcggcgaagcgccgccgctcgggggcgtcgaagaagcaccaggcggaggaggaggcctccataccttcctccctcagcgccaagatcctccgcgaggcgctcacccagcaacaggaggagtccctcgccgaccagcgccccgccgccgccgccaccgccgctccgtccccatccttctccttccccgtgcccaagaaagatggcgaggaggacgaagacgatgatgacgtcgacgagttcgatggcttcgacgcgcagagcgagtacgacggaggcgtggtaaaaaaaaaacacaatacgcgtctccttttgtttgcttccgtgtgattgatgtgtatttttctgataaattttctgttggtttgtagccggagattgatgaggaggacgagaaggctctcgctgcattcatgtcaaaggacacctcttcgaagcgctcacttggtgatatcattctcgagaagatcagggaaaaggatgcagaaatctcaacaggtgatcgccgatatgcgatagctgtttcttctctgattcttgggacgctagttgtttaaaaatcacattaactgcagcgtaaaagctatatcgattagcggaagctcttgctgctttgttagaataagtaaaatcatgttgaagctttaaatctttattatttgaggttatagtgcaaattgatgccttaggagtaataaaactcacattctgaactattaatgcgccatctagtattttaattcagtcagctaaaatgtctacagcgaatagcgggtactattgtggcggatatcctacacagggtcctaatgattgtagaagtttatccatcatgtgaatataaacagttgtcaataatactcctgcgatatcatacatatcaagtctgaaatcttaagtaaccacagtaatagttcttcactatagccgatttgttagaataaataaaataaattttagtctttaattttttatgatgcgaggtctatgttcaaatatatttcttaggagtactaaaacagaaacttcatttcttaaactaaaacatgacccataaaattcacaatttgagctagtacttgaacatagttccgctataaactgctattaaacactggttcacaataatgtccatccagcctagtgcggatacatcctgctaattaaactctggtctacaataatgtccattcaaccagtgactaactggtttggggctttttcagtgcacatttgaactaaatgcatggatggtttcttaaataaaaggactaaatcaattacatgggattcctgttatttgtatatgtttttgcagaaggacggactcctgtgaagttggactccagtattattgaactttataaagggtacatgcaactgcctccttctcgtttcatttaaaaagattcagttttgcatgtttttatggattgtttaattttgcaaaaacagggttggggagttcttgagccgatacacaagtgggaaaattcctaaaggattcaagcgtatcccatcattggaatgctggccagatgttctgcagctgactgagcctgaaaattggtctcctaacgcagtatatcaagcaacacggctcttctcttcaaacatgaacgcgaagaacgctgtgcgattctatgaagctattttacttcctcgtgtccgtaatgacataaggaagaacaagaggcttcattttgcactataccagtctctgaaaaaatgcctgtacaagcctgcagcgtttttcaagggaatattgttgccgctgtgtcaggtatttctatttaaagtagcaaacaacatttaacttgccatttagcataatcatttctactataatgtgcaatctccctatcttctgtttggtatctcatatttactttttcttctgtataatgcatggttggtattttttacccggttaatttatgtttttgaaatcacagtagacatacaaattgtctataatagtctgttagttataagccatagaacaacaaaaatttcctttttggtatatcttatctactggggtctgcttttctgttcatttttcgctttgccttatgggcggtggttttattttaggtctgtttcatactcacagttacacatgtccaactgtattacatctttctgattctcagtgagcttatattatgactgcaggaaaggaattgcactctgcgggaagctgtaattattggtagtatcatctcgaaagtctccattcctcctctccatgccaggtcagttgaattttgtggttcaggtcttaagatgcttgctgagttgcttatctctacttgatattttgatgcagtgcagctttaatgaaactagcagagatggagtactgtggcacaactaggtaaagtttggcacctttaaactgagtctatttgtccaatctagttgtaatttcagagtgttgggtcaaacaatttcttttcacataaatctctatggtccagtaaacgatactagttgaatggcaatatacatttttgtatgcaaaaatgattgatatgctataggttgattatagctgattagttatcacatgatgtgcaaaatcatgatactgttacattcatttcatttgcatctgtctttatgccaatagatgctatgttttcttttattgaaggttgccgtaaactatcaagcatcaattcctgattgatttctgctacatgtgtcatactctggtaaaactagtccaccatgtgtgccctgtggtgggcaacacttcctcctggtcttagaattggttggtttgtgtagttttaatgaatagtgtcttgcttagcagcataagtttatgatgtttacctgccagatgtgttgtacacatacgtcagtgttctctagcacattgtggattaatcattttatttataattgtgattgtccatttgttcttttggtacattcttggttatttgcaacatggtgtaacctatcacctctcttgcagctactttattaagctatttcttgataagaaatatgctttgccatatcgtgttgttgatgcggtttttgctcatttcatgcggtttattgatgaggagagggtcatgcctgttatatggcatcaatcactcctagcctttgtggaaaggtaagtgatagatcacagatacaccaaccaaatttattcagagcttttttaaaatataagcattgtcattactcatttgattatgccattcagaaaatttgtagagagcactatttaccttttttttttcatatttcttggttgccctattttgattactgatacatatattcaccttctctgcacttatggcctgatgttgccataagtgacatggtgtttctttgtagccatctttcctgacattcttgctggtgtattcatgtgttgctaaataatgtcatgacagatacaagaatgaattagagaaaaaggacaaggagaaacttgcacgcttgttggatcaccagaagcactatttggtagatacttttcatttcatcgatcatatgcatgcatgattcacttaagtgttctctgctcaataaatgtgtcaactgccatgccctgaacctttgcttgctctctatacaggttactccagaaattcgtagggaacttcggatgagctgcaacaggggtgaaaaggacacaatcatgtcgatatatatccttacagtgcatgcagattcttaccttttttgcattataatccattgacgaaagcttactactagtgctaacaatgagccttatttggaattgcgtgttcctaacttcattacatgtggttgtgtccttaacactgttcttacgctccccagtttctgtgatcacgaaaccaattgaagaagacaggtggaatgttccggaagtacctatggaggagtaatcgtttgattcttaatactggtggggaggggcaattttccgtaccagtgttgtagttttgcttgccgaatgaacttttcaagaggtatttcagttctatgcagcaatggatcgatgccagcaagggaagttgtaatgcaaatttttgatcagtttggaaatgtatctgatagtaacagagtattcagcgtgtagctgtaatatacgtcaccagaattgtagtgttttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0352400, RefSeq:Os09g0352400