BGIOSGA017647

From RiceWiki
Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017647| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017647, complete gene.| tag = OsI_208...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017647

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017647, complete gene.

LocusTag

OsI_20812

Ensembl Transcript ID

BGIOSGA017647-TA

Ensembl Protein ID

BGIOSGA017647-PA

Length

1570

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28225244..28226813

Sequence Coding Region

28226091..28226813,28225244..28226038

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28225244..28226813 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28225244..28226813 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCAGCGCCGCCGCCCTCCACCCACTCCACCGCACCCTTCGCAACTCCGGAGGTGCGTTCTGTCGCCGCCAGACGCCCGCGGCCTGCGGCGGCGAGCATCTCCGCGCGCCTACGCGACGTGGCGAGGAGGAGGAAGGATAGGCCTCGTCGCTGCCGGGCACAGGTGGCTCCCCGCGGCGGCGACCGCATCAGCGCCCTCTCCGACGATGTGCTCCTCCTCATCCTGCGGCGGCTCGCCACCCGCGCCGCGCTCGCCACCGCTATGCTCTCCAAGCGCTGGGCCCGGCTCCTGCGCTGGCTTGACACCCTCGATTTCATGGTCGGTGAAATACTCCCGCCGCGCTACCGTAGGTGCATCCAACTCCACCAAGCGGCTGGTTTTGCTGCGTATCCCGTTGATGTCAAGGTTCTCGTTGCAAGTATCAAGCGACACGAGCGCCTTGCCATGCGAAACATGGCGGCCTCCATCAATAGCTTGTTAGACGCGGATGGCAGTGATGAATGTGCTGGCCAAGCTCGACGGAGGGCCCGTGTGCTGCGGGTGGAGTTCTTTGCGACTCACTACACCGATCTTATGAACCGATTGATCACCAAGGCATTGGATGCTTGGGAAGTCGAGGATCTTGAAGTTTTTGCTAAGCCTGCATATTGGTCTGAGTGGTCTCTGCCGCCGATTGTCCACAGATTTCCTCACCATGGTCTCTGCATTGAGCCCCAAGGGTTCCACGCTCTCACCAAAATGACCTTGCAAGACTTGCGAAACTCCGTGGCCAAAGCATCCTATGAAGATGTGTTTAAGTCATGCCCCCAGTTGCAAGTGCTACACCTCAAGTCATGCAGGTGGGCGGACCGGGGCATTCTGGTTATCGATTTCCCAAAGTCAGGGATTAAGCAGCTTATTGTGGAGTTTTGCAGCGCCATTGCACTACACTCTCTTGGGATGCTTGAGAGCATAGCTATAAGGGAGACTTGGGTCAGGTACAAGCATTGCTCCTTCTCGCATCTTATGCACATGAACCTTAACTTACGCCATGGTTACCGTAATCGTCTGCGTGACTTATGTATTGGTTGGGACTTGAACATCCAGCAGTTTCTTGGATTCACCAAGAACATAACCAACCTGGTTCTACGATTCACTGGATATGGGAGATGGTTCGTGCCATCTTGCCCCTCGTTGTTGCTGGCTAATCTCAGAAGGCTCCTGATTGCTGATGTGCCTTCATCATGGGATGTCTCTTGGCCTCGCCTCCTACTTGAAGCAGCACCATGCCTGGAGAGCCTTCACATCCATATTATCCCTTGGGATGACGATTCTTTTGATGAAATCATTTGGCAACCATCCACTTTGCAGCATGAAGAACTAAAAGAGTTGGTTGTAATTGGTTTCGAGGGAACAGAAAGACAGATTTACTTTGTTAACTTTGTAAGGAAGTATCAACAACATTGCAGCTTGTTGCTCTATTTAGATATGGGCATGTTCAAGAAATGGGGCGTTGGGACTGGAAAATTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPAPPPSTHSTAPFATPEVRSVAARRPRPAAASISARLRDVARRRKDRPRRCRAQVAPRGGDRISALSDDVLLLILRRLATRAALATAMLSKRWARLLRWLDTLDFMVGEILPPRYRRCIQLHQAAGFAAYPVDVKVLVASIKRHERLAMRNMAASINSLLDADGSDECAGQARRRARVLRVEFFATHYTDLMNRLITKALDAWEVEDLEVFAKPAYWSEWSLPPIVHRFPHHGLCIEPQGFHALTKMTLQDLRNSVAKASYEDVFKSCPQLQVLHLKSCRWADRGILVIDFPKSGIKQLIVEFCSAIALHSLGMLESIAIRETWVRYKHCSFSHLMHMNLNLRHGYRNRLRDLCIGWDLNIQQFLGFTKNITNLVLRFTGYGRWFVPSCPSLLLANLRRLLIADVPSSWDVSWPRLLLEAAPCLESLHIHIIPWDDDSFDEIIWQPSTLQHEELKELVVIGFEGTERQIYFVNFVRKYQQHCSLLLYLDMGMFKKWGVGTGKL</aaseq>

Gene Sequence

<dnaseqindica>1..723#776..1570#ATGGCGCCAGCGCCGCCGCCCTCCACCCACTCCACCGCACCCTTCGCAACTCCGGAGGTGCGTTCTGTCGCCGCCAGACGCCCGCGGCCTGCGGCGGCGAGCATCTCCGCGCGCCTACGCGACGTGGCGAGGAGGAGGAAGGATAGGCCTCGTCGCTGCCGGGCACAGGTGGCTCCCCGCGGCGGCGACCGCATCAGCGCCCTCTCCGACGATGTGCTCCTCCTCATCCTGCGGCGGCTCGCCACCCGCGCCGCGCTCGCCACCGCTATGCTCTCCAAGCGCTGGGCCCGGCTCCTGCGCTGGCTTGACACCCTCGATTTCATGGTCGGTGAAATACTCCCGCCGCGCTACCGTAGGTGCATCCAACTCCACCAAGCGGCTGGTTTTGCTGCGTATCCCGTTGATGTCAAGGTTCTCGTTGCAAGTATCAAGCGACACGAGCGCCTTGCCATGCGAAACATGGCGGCCTCCATCAATAGCTTGTTAGACGCGGATGGCAGTGATGAATGTGCTGGCCAAGCTCGACGGAGGGCCCGTGTGCTGCGGGTGGAGTTCTTTGCGACTCACTACACCGATCTTATGAACCGATTGATCACCAAGGCATTGGATGCTTGGGAAGTCGAGGATCTTGAAGTTTTTGCTAAGCCTGCATATTGGTCTGAGTGGTCTCTGCCGCCGATTGTCCACAGATTTCCTCACCATGGTCTCTGCATTGAGCCCCAAGTCCCGGCTGAGAAGCTTGAAGCTAGGTGGTTGTATCATTCCGCCATTGCAGGGGTTCCACGCTCTCACCAAAATGACCTTGCAAGACTTGCGAAACTCCGTGGCCAAAGCATCCTATGAAGATGTGTTTAAGTCATGCCCCCAGTTGCAAGTGCTACACCTCAAGTCATGCAGGTGGGCGGACCGGGGCATTCTGGTTATCGATTTCCCAAAGTCAGGGATTAAGCAGCTTATTGTGGAGTTTTGCAGCGCCATTGCACTACACTCTCTTGGGATGCTTGAGAGCATAGCTATAAGGGAGACTTGGGTCAGGTACAAGCATTGCTCCTTCTCGCATCTTATGCACATGAACCTTAACTTACGCCATGGTTACCGTAATCGTCTGCGTGACTTATGTATTGGTTGGGACTTGAACATCCAGCAGTTTCTTGGATTCACCAAGAACATAACCAACCTGGTTCTACGATTCACTGGATATGGGAGATGGTTCGTGCCATCTTGCCCCTCGTTGTTGCTGGCTAATCTCAGAAGGCTCCTGATTGCTGATGTGCCTTCATCATGGGATGTCTCTTGGCCTCGCCTCCTACTTGAAGCAGCACCATGCCTGGAGAGCCTTCACATCCATATTATCCCTTGGGATGACGATTCTTTTGATGAAATCATTTGGCAACCATCCACTTTGCAGCATGAAGAACTAAAAGAGTTGGTTGTAATTGGTTTCGAGGGAACAGAAAGACAGATTTACTTTGTTAACTTTGTAAGGAAGTATCAACAACATTGCAGCTTGTTGCTCTATTTAGATATGGGCATGTTCAAGAAATGGGGCGTTGGGACTGGAAAATTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017647