BGIOSGA017650

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Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017650| Description = Endonuclease putative| Definition = Oryza sativa Indica Group BGIOSGA017650, complete gene.| tag = | tid = BGIOSGA01...")
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Gene Name

BGIOSGA017650

Description

Endonuclease putative

Definition

Oryza sativa Indica Group BGIOSGA017650, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA017650-TA

Ensembl Protein ID

BGIOSGA017650-PA

Length

3685

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28209293..28212977

Sequence Coding Region

28212966..28212977,28212715..28212831,28212227..28212285,28212086..28212145,28211957..28212010
,28211799..28211847,28211645..28211692,28211382..28211447,28211167..28211217
,28210967..28211086,28210811..28210895,28210616..28210697,28210279..28210387
,28210145..28210201,28210019..28210065,28209860..28209914,28209293..28209364

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28209293..28212977 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28209293..28212977 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCATCAAGGGTTTGACGAAGCTTTTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGGCGCATTGCCGTCGACGCCAGCATGAGCATCTACCAGTTCCTCATTGTAGTTGGAAGGACGGGGATGGAAACCCTCACGAACGAGGCCGGTGAAGTCACCAGTCATTTGCAAGGTATGTTCAACCGGACAATAAGGTTGCTGGAGGCAGGAATCAAGCCAGTATATGTTTTTGACGGCAAGCCTCCTGATCTGAAGAAACAAGAGCTCGCAAAAAGGTACTCGAAGAGGGAGGATGCCACCAAAGAACTAACAGAGGCAGTAGAGGAAGGAGATAAAGACGCAATTGAAAAATTCAGCAAGAGAACTGTGAAGGTCACGAAGCAGCACAATGAAGAATGTAAACGACTATTAAGACTTATGGGGGTTCCTGTTGTAGAGGCGCCATGTGAAGCAGAAGCAGAATGTGCTGCACTTTGCATAAATGATATGGTTTATGCAGTTGCATCAGAAGATATGGACTCTCTTACTTTTGGAGCTCCACGGTTTCTTCGTCATTTGATGGATCCAAGTTCCAAGAAAATTCCAGTTATGGAATTTGAAGTCGCGAAAGTTTTGGAGGAGCTTGAACTCACTATGGACCAATTCATTGACTTGTGCATCCTATCTGGATGTGACTATTGTGATAGCATTAAAGGTATTGGAGGTCAAACAGCTCTGAAACTTATTCGTCAACATGGGTCCATAGAAAGCATTCTGGAAAACATAAATAAAGACAGATATCAGATTCCTGAGGACTGGCCTTATCAAGAAGCTCGACGCTTGTTCAAGGAACCCAATGTTACATTGGATATTCCTGAGCTGAAATGGAATGCTCCCGATGAGGAAGGTCTTGTACAGTTTCTGGTGAAAGAAAATGGTTTCAACCAAGATAGAGTGACAAAGGCCATAGAGAAGATTAAATTTGCCAAGAACAAATCTTCCCAAGGAAGGCTCGAATCCTTCTTCAAGCCAGTTGTTAGCACATCAGTGCCTCTGAAAAGAAAGGACACTTCAGAAAAACCAACCAAAGCAGTCGCTAACAAGAAAACAAAGGGAGCCGGCGGAAAGAAGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MGIKGLTKLLADNAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAGEVTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSIKGIGGQTALKLIRQHGSIESILENINKDRYQIPEDWPYQEARRLFKEPNVTLDIPELKWNAPDEEGLVQFLVKENGFNQDRVTKAIEKIKFAKNKSSQGRLESFFKPVVSTSVPLKRKDTSEKPTKAVANKKTKGAGGKKK</aaseq>

Gene Sequence

<dnaseqindica>1..12#147..263#693..751#833..892#968..1021#1131..1179#1286..1333#1531..1596#1761..1811#1892..2011#2083..2167#2281..2362#2591..2699#2777..2833#2913..2959#3064..3118#3614..3685#ATGGGCATCAAGGTGAGCGCGGGAGGGGGGGGGGTGCCGCGCCGTCCTCGTTCGGATTTGTGACCGGTGGTGTGGGTTGTAGCTGTTTTTGCGGCCGATTCGTGATGGGTTTTCGTCTCGATTTTGTGCGGGTTTTTTTTTGTTAGGGTTTGACGAAGCTTTTGGCGGACAATGCGCCCAAGGCGATGAAGGAGCAGAAGTTCGAGAGCTACTTCGGCCGGCGCATTGCCGTCGACGCCAGCATGAGCATCTACCAGTTCCTCGTATGCCCCCATGTCTCCTCTCACATTCTGCGAGTTGGCTTTGAAATGTGCTCACTTACTTGGGGTTTAGGGTTTCTTAAGCCTTTGATTGCGCGAGAGAGATTGTATTTTTTTCTATTTAACTGCCCAGTGTTGTAAGGATTCCTCATTTCAAATTGCTCTCTTAGACCAAATCGGGTTGGGTGAAATTGGGATACCTCCATTGTGCCTCATATTTTCTTATTTGGTCGGCTATATTTATTAACATTAAACTAAACACCTCTAGCATTGGATGTTTTGCTTTAAAAATGGGAGTAGAGCATAGCAATTCCATATTACATTCACTATATGTTCTGTGTGCAAATGCTTGACAAGTTTTGGTGAGGTATTAGGAAATCCTTACCCACTGCTTTATAAGTTGGGACAGCTTTTTATGTTTTACTTGTATAGATTGTAGTTGGAAGGACGGGGATGGAAACCCTCACGAACGAGGCCGGTGAAGTCACCAGGTTCTAAATATTAATCTTACACCGTTTCTAGTGCTAGGATTCTGTTAATTCTTTTATAAATTAGAACTTTTTGCTGTGCAGTCATTTGCAAGGTATGTTCAACCGGACAATAAGGTTGCTGGAGGCAGGAATCAAGCCAGTGTAAACCCAAATTCCTCATGTGTTGTTATTGAAATTATCCATATAAATACACTTAAAATTGTGACACTCATGCAGATATGTTTTTGACGGCAAGCCTCCTGATCTGAAGAAACAAGAGCTCGCAAAAAGGCATGATATGTTTCTTTCATCCTTAGATTGTTTTTCCTGCTGCTACTTATAACTTGTCCTATATCCCATTTTGGGCTATGATCTGTTTCTAACATGGCATATTCTGCAGGTACTCGAAGAGGGAGGATGCCACCAAAGAACTAACAGAGGCAGTAGAGGTGAGCTAACAGTTTGTTGTGCTATTTACAATGTTCTATTATGTTCTGTCCTGTGCTTGTTCTCCTTCCTTCCTTGATCCCCAGAGAAATGACTTTTAATGTGCAGGAAGGAGATAAAGACGCAATTGAAAAATTCAGCAAGAGAACTGTGAAGGTGAGAAGGGGGGTTGATCTTACACACTAAAAGAAATGTAAAAAAAAAAAAAATCTATGATGTTTGAGGGACAACAGATTCATTCGCTGAGAAAAATATCAATGAAAACAGTTGGTTTGAATAACATGATATGGAAGATGCAAAAAAGGTAAGTATGAGAGTAACCTTATCTTTGCATCTTCTTTTTCCTTGAGCAGGTCACGAAGCAGCACAATGAAGAATGTAAACGACTATTAAGACTTATGGGGGTTCCTGTTGTAGAGGTAAATCCAATTTTCTTTGGTGCCACATGCTTTTTCAGGGAATGAGTCAATATATAATCGTTGGATTTGTTTATTTTACTATGCTAGCATAAAATCTATGATTTATCATGTATTTGCCATGCTCTCAATCTCATCCAAAGACATCTTCTTTCCGGTACCAATAGGCGCCATGTGAAGCAGAAGCAGAATGTGCTGCACTTTGCATAAATGATATGGTAATGTTAACATAGTGGACTTCTGCCTTCTTGTTTCCATCTCTTGCTTCCATTTTTATTAATTAATGTTTTTTTTATAGGTTTATGCAGTTGCATCAGAAGATATGGACTCTCTTACTTTTGGAGCTCCACGGTTTCTTCGTCATTTGATGGATCCAAGTTCCAAGAAAATTCCAGTTATGGAATTTGAAGTCGCGAAAGTATGCAGCACTGTGATTTGCTTGGTACAGACACTGATGTTGTACACACTTGACCAATTTTCATATTGCAGGTTTTGGAGGAGCTTGAACTCACTATGGACCAATTCATTGACTTGTGCATCCTATCTGGATGTGACTATTGTGATAGCATTAAAGGTATTTTTGCTTTTCCTCTTCTCATGAGTAGTATTCCTATAAATTCTTGCTTGCTTGAATTTCTGTCCATGCAAACCTTTTTTCCTAACCAACTATGTGTGCTTGTCCGCTAGGTATTGGAGGTCAAACAGCTCTGAAACTTATTCGTCAACATGGGTCCATAGAAAGCATTCTGGAAAACATAAATAAAGACAGGTTAATCTTTTGAACTATTTGAATATTTCCCACTTGACTGAGAACTCAACTGAGACATGTATATCAGCTGTGTGGCAAAGGCAGCCCAAAATTTTCTATATGTGCTACTTTATTTCATTTCTTGGTCGCATTATCTTACTTAGATGTAATGATGTATTGTAATGTGATGAAGACCATTTCCTATGCTAATTTGTGCTAAATTTTGATCATATCTATCGCCTACTGCAGATATCAGATTCCTGAGGACTGGCCTTATCAAGAAGCTCGACGCTTGTTCAAGGAACCCAATGTTACATTGGATATTCCTGAGCTGAAATGGAATGCTCCCGATGAGGAAGTATGCCTGTCACCTTTTTTTCCTTGCCTTCAAATTTTACAAGTGATGTCGTCCCAATACTTTAATTCTTTCTCCAGGGTCTTGTACAGTTTCTGGTGAAAGAAAATGGTTTCAACCAAGATAGAGTGACAAAGGCATGCACTTTTCTTCTGACTTACTATGTTATATTCTTGAAATATTTTTATCAGCAATTTGTTTCTCCGGTTTATGTAGGCCATAGAGAAGATTAAATTTGCCAAGAACAAATCTTCCCAAGGAAGGTGAGACGTGAGCATTGTGGTACATTTTTATACTTTGGTTCTAAGAGTGTTGCATGCCTATATCATTTGTTAAACCATACCAACTCTTGAATTAATGTGACCAGGCTCGAATCCTTCTTCAAGCCAGTTGTTAGCACATCAGTGCCTCTGAAAAGAAAGGTACCTTCACCTGAATGCCATCAATCTTGTCGTGCTTAAATTTAGAACTTTTAGCCTTCTCCAGGTTCATCCATTGTAGCATGATATACAACCAATTCATGTCATTGAATTGCGTACTTTATCTGTCCATTCAACTAACAATGTTGAATCACGTGGTTTGATGTTTTGATTGTCCAATGTACCTGCCAAATAACAGATCACAGATGAATGATAAAAATATGTCCATTAGACCAGTACTCAACAATATATTTGCAAGCAGCCAGAAGTAGGCAGATACAATAGCCAAAGCTGAATCTTGTAAGCCATGCTAAAATCCTTCTACTATGAGAAGGTTATAGCCTTGTTTGGCATGATTTTCTCGCAGATCTTGTACTGTTCCATGTAAAACTGCAACCATAGTGCTATACTATATGTAGGCTTGCAAATGTTGTGGCCATAATTATATTTTTGTAGCAATATTATGTCTCATGATTTGTTTCTATGATATAATGGCAGGACACTTCAGAAAAACCAACCAAAGCAGTCGCTAACAAGAAAACAAAGGGAGCCGGCGGAAAGAAGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017650

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017650&oldid=46406"