BGIOSGA017653

From RiceWiki
Revision as of 02:22, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017653| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017653, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017653

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017653, complete gene.

LocusTag

OSJNBA0052K01.18

Ensembl Transcript ID

BGIOSGA017653-TA

Ensembl Protein ID

BGIOSGA017653-PA

Length

2872

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28188143..28191014

Sequence Coding Region

28190951..28191014,28190796..28190839,28190580..28190675,28189825..28189917,28189468..28189549
,28189220..28189284,28188951..28189135,28188687..28188864,28188560..28188603
,28188297..28188471,28188143..28188211

Genome Context

<gbrowseImage1> name=IndicaChromosome05:28188143..28191014 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:28188143..28191014 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGACGGCAAGGACTCCCTCGACCTCTCCGGCCTCGGCGCCGCCGTCCCCAACGCCAAAGAGCTCAGCGCGGAGGACAAGGCCAACCTCGTGGAGTCGATTAAGAACACGCTGCAGGGATTGGCGGCGCGGCACACGGACGTGCTCGAGAGCCTCGAGCCCAAGGTCAGGAAGCGCGTGGAGGTGCTTAGGGAGATCCAGAGCCAACACGATGATCTAGAGGCGAAGTTCTTTGAGGAGAGAGCTGCACTTGAAGCTAAATATCAGAAGATGTATGAACCACTTTACTCCAAGCGTTATGAAATCGTGAATGGTGTGGTTGAGGTAGATGGTGTCACCAAAGAAGCTGCAGATGAAACCCCTGCAGAGCAGAAAGAGGAGAAGGGTGTACCAGAGTTCTGGCTTAATGCCATGAAGAACCATGAAATTCTGTCTGAGGAGATCCAGGAGAGGGATGAGGAAGCTCTTAAGTACCTCAAGGACATCAAATGGTACAGAATTAGTGAGCCAAAGGGTTTCAAGCTTGAATTTTACTTCGATACTAATCCATTCTTCAAGAACTCGGTGCTTACCAAAACATACCACATGATTGATGAAGATGAACCAATTCTGGAGAAAGCCATTGGTACTGAAATTGAATGGTTCCCTGGGAAGTGTTTGACACAAAAGGTTCTCAAGAAGAAACCAAAGAAGGGCTCAAAGAACACTAAACCTATCACAAAAACTGAAAACTGTGAGAGCTTCTTTAACTTCTTCAGCCCACCTCAAGTTCCTGATGATGATGAGGAAATTGATGAGGATACAGCTGAACAGTTGCAGAACCAAATGGAGCAAGATTATGACATTGGATCTACCATCAGAGACAAGATCATTCCACATGCTGTTTCATGGTTTACTGGAGAGGCTGCTCAAGATGAGGACTTCGAAGGCATTATGGATGATGAAGATGATGACGATGAAGATGACGACGATGATGAAGATGAGGATGACGAGGATGATGATGAAGACGACGAGGATGAAAAGAAGGGCGGACGAGTTCCTTCAGGGGAAGGGCAGCAGGGAGAGCGACCTGCAGAATGCAAGCAACAGTAA</cdnaseq>

Protein Sequence

<aaseq>MSDGKDSLDLSGLGAAVPNAKELSAEDKANLVESIKNTLQGLAARHTDVLESLEPKVRKRVEVLREIQSQHDDLEAKFFEERAALEAKYQKMYEPLYSKRYEIVNGVVEVDGVTKEAADETPAEQKEEKGVPEFWLNAMKNHEILSEEIQERDEEALKYLKDIKWYRISEPKGFKLEFYFDTNPFFKNSVLTKTYHMIDEDEPILEKAIGTEIEWFPGKCLTQKVLKKKPKKGSKNTKPITKTENCESFFNFFSPPQVPDDDEEIDEDTAEQLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQDEDFEGIMDDEDDDDEDDDDDEDEDDEDDDEDDEDEKKGGRVPSGEGQQGERPAECKQQ</aaseq>

Gene Sequence

<dnaseqindica>1..64#176..219#340..435#1098..1190#1466..1547#1731..1795#1880..2064#2151..2328#2412..2455#2544..2718#2804..2872#ATGAGCGACGGCAAGGACTCCCTCGACCTCTCCGGCCTCGGCGCCGCCGTCCCCAACGCCAAAGGTTCGCGGCTCTTCTCGCTCTCTCTCTAGTTCGATCTCGGTTGCTCCGTTTTGTTGTTGTTGTTGGTGTGGTTGGCTTATACTGGATTTGGATTCGGTGGCTGTGATGCAGAGCTCAGCGCGGAGGACAAGGCCAACCTCGTGGAGTCGATTAAGGTGGGGGTTTCTGCGGTGGTGTTTTTGTTTTTGCTGCTTGCTGCTTCTATCGGGGTTTGGGCGGGCTTGGGAGGGGTTTTCTGATGAAACTTGTGGTGATTTCGATGTTTGCTTGCGCAGAACACGCTGCAGGGATTGGCGGCGCGGCACACGGACGTGCTCGAGAGCCTCGAGCCCAAGGTCAGGAAGCGCGTGGAGGTGCTTAGGGAGATCCAGGTATAGGAGATTTCCACTTTCCTGGCACGATACCCTTTTTTATGGTCGTTTCAACCATGCTTGATGTGGCACTTTGCACGATCCTGGATGATTAATGGTTACTGATGAAGCGACTCATACTGTGATTCTTATGTCACTTGCTTAAACAGCACAGAATGGCGTGTACTAGTACGAGAAATTTCATTCCTAGTTGGGGCTAGGACTGACTTTTAGTGTAGGTTGCACGCTTGCTTATAAGTTGGATTACTCCGGTGCTCTTATTAATTGTATGGGAGATTCTGGAAAAATGCCACAAACTATGCGTGTGTGTTACTAGTAACTACTGTAGGATGACTCACGTTTCAACTTGATGTTACTGGTGATGCCAGCTCTAGATTTTTTTTTTACTTCGTTGAACTATTTTGTTTCAAACCCAAACGATGAATATTGATATTGAGTCCAAGCAGTTACAAAACAGTTTAGCTGTGGAGTTTCTTGAAAGCCTTGTTCTTTTACTTTATGTGAATTGTTTCCACCTAGCTATTGTCAGGTTATGTTACTAACTCAAATTGCTTTATCTGTGCTGTATCAATACTAATTGTGGAACTACAAAGCACAATGGTTGAATTTTGGAATATCCCTGTTGCATCTGGTGCTAAGCTGCTTCGTTTAATATCTGCCAGAGCCAACACGATGATCTAGAGGCGAAGTTCTTTGAGGAGAGAGCTGCACTTGAAGCTAAATATCAGAAGATGTATGAACCACTTTACTCCAAGGTAAACTATTTTTAATGGCCTGCTATTGCCTGTGTTATGCATTTTTGCTGTCTCACCCTGCTGTATGTTTACTCTTAACTCTTTGATCTGTTGGAAGCATGTATCACCTCATCATGGAAACAACTGCTTGAATAGCTCGCAGACCTTGACTTTTCGTTTTTGTATGGTTCATACTTCATCGCCTCACACAAGACAGATATCTCTAGCATTTGCCATCCCTGTATCATATGGATGTCATGATCTGTCTGAGTTTTTTTCCATCTGTGTGTTGACAGCGTTATGAAATCGTGAATGGTGTGGTTGAGGTAGATGGTGTCACCAAAGAAGCTGCAGATGAAACCCCTGCAGAGCAGAAAGGTTCTCATATTCTTCCTTTACTAACATGTTTGTCTATTCCCAGTTGGCTTAATGCTTACTACTCCTTCCGTCCCAATATATAGCAACCTAGGGTATCCCATCCTAGGCTGCTACATATTGGGACGGAGGGAGTAGAAATCATCTTTTTTTATTTTTCAATTAAAATTTAATGCTTCCTTGCAGAGGAGAAGGGTGTACCAGAGTTCTGGCTTAATGCCATGAAGAACCATGAAATTCTGTCTGAGGAGGTGAGACTTCGCACTTTTATAAAACAAAATTCTTCTAATTTGGTCTAGCATGTCTTAAGTTTCATTTGTCTGGCTCGTATGCAGATCCAGGAGAGGGATGAGGAAGCTCTTAAGTACCTCAAGGACATCAAATGGTACAGAATTAGTGAGCCAAAGGGTTTCAAGCTTGAATTTTACTTCGATACTAATCCATTCTTCAAGAACTCGGTGCTTACCAAAACATACCACATGATTGATGAAGATGAACCAATTCTGGAGAAAGCCATTGGGTAACTAATATTTCAACTCGTGAAGTTTTACTCTTTTAGATGAATGGACAGTTTCACCAACATATCTCTGACATTCTTGTTTTCAGTACTGAAATTGAATGGTTCCCTGGGAAGTGTTTGACACAAAAGGTTCTCAAGAAGAAACCAAAGAAGGGCTCAAAGAACACTAAACCTATCACAAAAACTGAAAACTGTGAGAGCTTCTTTAACTTCTTCAGCCCACCTCAAGTTCCTGATGATGATGAGGAAATTGATGAGGATACAGTAAGTTTCATATTTTCTGTGCATGTTTTAAAGTTTAAAGCATGTATTCATGGGCATGCTTCTTATGTTTATCTCCTGAATAGGCTGAACAGTTGCAGAACCAAATGGAGCAAGATTATGACATTGGGTATGCCCTTGTGTATTCTGTTACTTGCAGTGGCTGCTTTCTGTCCAGTACACTGTACTAGTTCTAAATGTCCCTTTTTTGTTGCCAGATCTACCATCAGAGACAAGATCATTCCACATGCTGTTTCATGGTTTACTGGAGAGGCTGCTCAAGATGAGGACTTCGAAGGCATTATGGATGATGAAGATGATGACGATGAAGATGACGACGATGATGAAGATGAGGATGACGAGGATGATGATGAAGACGACGAGGATGAAAAGGTGACGGAAAACTCATGGTTCTCATGCACTTTCTAGTTTCAACCAAACTCTTTTTCTTACTATTTTGCTTTCCTTCCTGAAACAGAAGGGCGGACGAGTTCCTTCAGGGGAAGGGCAGCAGGGAGAGCGACCTGCAGAATGCAAGCAACAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017653