BGIOSGA017682

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Revision as of 02:23, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017682| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017682, complete gene.| tag = OJ1131_...")
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Gene Name

BGIOSGA017682

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017682, complete gene.

LocusTag

OJ1131_E09.9

Ensembl Transcript ID

BGIOSGA017682-TA

Ensembl Protein ID

BGIOSGA017682-PA

Length

2930

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27752395..27755324

Sequence Coding Region

27754665..27755324,27753942..27754181,27753668..27753757,27753115..27753264,27752883..27753007
,27752619..27752748,27752395..27752520

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27752395..27755324 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27752395..27755324 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATCTCCTTCGACGCGTGGGTCGGGGTGCAGCGGCACGGGCAGGACCTCGCGGACCGCCTCGCGCAGGGCTTCTCGGGCCTCCTCCTCCACGCGCACCCGCCGCAGCTCCACTGGTCCGCCCCCGCGCTGCCGGCCAAGCTGATACCCTTCGAGATCGACCTCCCCGTCGTCCCCTTCGTCGTCGGAGGGAGGCGGGCCGGGGGCGGGAGGGGCGCCGCCGACCTCCCCGCCGCGGCCGTCGCGTCGTTCGTCGAGATCGGCGGGCGGCTCGGCCAGGCGGGGTCCGAGCTCGGGGCGTGCGTCGGGGGCGCCGTGCAGCAGCTGGCGCGGCAGATCCTTGTCCCGTTCCTGGCGGAGAGCGCGCGGGGCCGGAAGTGGGAGGCGATTCCGCCGCAGCCTGCTGCTGCGGCGGCGGCGGCGGCGACGGTGAATGAGGGGGAGGTGGCTCTCGCGGTGGAGAGAGCTGAGGATAAGGGGCTCGCATCGGAGAGGGTCGGAGACAGAGGGCCTCTCGAGGTAGCTGCTGCAGCGGCCGCGGCAGCCACTGGAAGTGCCACTGCGACTAGCGTTGGTGGTGCGGAAGGTGGTTTGGATGAGGAAGATGATGGGTTCGGATGCGATATTGGGACTATTGGTAACTTCAAGAAGGCTAAGGGAACCATAAATATCTCAGCAACATACGAGACCAGGCACCATGACTTTGAGACTTCAGTTGTTGCACGTGGGGACCTTTGGAGGTTGGAGTCGTCGCGTGGTGGTTCAAATTCTGGCGATGAAAATGCTCCGCTTTTCCTTGTTCAGCTGGGACCTTTATTATTTGTTCGTGACTCTACACTTCTTTTGCCTATTCATCTGTCAAAGCAGCACCTTCTTTGGTATGGCTATGATCGCAAGAACAAAATGCACTCCTTATGTCCAGCTATCTGGTCAAAACATAGAAGATGGATGGTGATGTCAATGATGTGCCTCAATCCTGTAACCTGTTCTTTCATGGATGTGCAGTTCCCGAATGGACAGCTAACATACGTTGCTGGAGAAGGGATAACAGCAAGTGGATTTTTCCCATTCTTTGGTGGTTTGCTTCAAGCTCATGGAAAATGTCCTGGGGAAACAAGATTAAGCTTCTCCTTCAAGAGCAAACAAGGCACAAGGTTCACCCCTATGTTTCAATGGCCTGACAATTCTCTTTCTTTTGGAGTTGCACAAGCCTTAGCGTGGAAAAGATCTGGCCTTATGGTGAGGCCCAGCATTCAAGTCAGTGTTTGCCCCACATTTGGAGGAAGCGATCCTGGGATACGGGCAGAGTTTGTCCATTCATTGAAGGAGGAACTCAATGTAATGTGTGGTTTCTCTTGTGCCAGACATCCCTCGGCCTTCACAGCTGTTTCTCTCGGGCGATCCAAGTGGAATGGACAAGTCGGCAGTTCAGGACTAGTAATCACCTTGGAAACACCGCTGGACAACTTGGCTAGACCATCTTTATCTGTTCAATTGAATGGAGGTTTTGAGTTATGA</cdnaseq>

Protein Sequence

<aaseq>MEISFDAWVGVQRHGQDLADRLAQGFSGLLLHAHPPQLHWSAPALPAKLIPFEIDLPVVPFVVGGRRAGGGRGAADLPAAAVASFVEIGGRLGQAGSELGACVGGAVQQLARQILVPFLAESARGRKWEAIPPQPAAAAAAAATVNEGEVALAVERAEDKGLASERVGDRGPLEVAAAAAAAATGSATATSVGGAEGGLDEEDDGFGCDIGTIGNFKKAKGTINISATYETRHHDFETSVVARGDLWRLESSRGGSNSGDENAPLFLVQLGPLLFVRDSTLLLPIHLSKQHLLWYGYDRKNKMHSLCPAIWSKHRRWMVMSMMCLNPVTCSFMDVQFPNGQLTYVAGEGITASGFFPFFGGLLQAHGKCPGETRLSFSFKSKQGTRFTPMFQWPDNSLSFGVAQALAWKRSGLMVRPSIQVSVCPTFGGSDPGIRAEFVHSLKEELNVMCGFSCARHPSAFTAVSLGRSKWNGQVGSSGLVITLETPLDNLARPSLSVQLNGGFEL</aaseq>

Gene Sequence

<dnaseqindica>1..660#1144..1383#1568..1657#2061..2210#2318..2442#2577..2706#2805..2930#ATGGAGATCTCCTTCGACGCGTGGGTCGGGGTGCAGCGGCACGGGCAGGACCTCGCGGACCGCCTCGCGCAGGGCTTCTCGGGCCTCCTCCTCCACGCGCACCCGCCGCAGCTCCACTGGTCCGCCCCCGCGCTGCCGGCCAAGCTGATACCCTTCGAGATCGACCTCCCCGTCGTCCCCTTCGTCGTCGGAGGGAGGCGGGCCGGGGGCGGGAGGGGCGCCGCCGACCTCCCCGCCGCGGCCGTCGCGTCGTTCGTCGAGATCGGCGGGCGGCTCGGCCAGGCGGGGTCCGAGCTCGGGGCGTGCGTCGGGGGCGCCGTGCAGCAGCTGGCGCGGCAGATCCTTGTCCCGTTCCTGGCGGAGAGCGCGCGGGGCCGGAAGTGGGAGGCGATTCCGCCGCAGCCTGCTGCTGCGGCGGCGGCGGCGGCGACGGTGAATGAGGGGGAGGTGGCTCTCGCGGTGGAGAGAGCTGAGGATAAGGGGCTCGCATCGGAGAGGGTCGGAGACAGAGGGCCTCTCGAGGTAGCTGCTGCAGCGGCCGCGGCAGCCACTGGAAGTGCCACTGCGACTAGCGTTGGTGGTGCGGAAGGTGGTTTGGATGAGGAAGATGATGGGTTCGGATGCGATATTGGGACTATTGGTAACTTCAAGAAGGCTAAGGTACACATTACCGATTTGCTGATCAAATGTTGCGTCGTAATTACCACTTACCTGTTACACAATTCTGCAACTGTAATTGGAAGCAAGTTCAATCGGATACTCAGAATGTGCTTAGGAGTGACATTTGTATAGGTTCTAGGTTTATTTGGGGTGTAAAACTGTGTATCTTGTCTGAATGCTGAGGTAGTGAGATTTTAGAGGGCTTTGGTGCTTGGAACTCATTGATTTAATATGCTTGGAATCTTCTTTTGCATGCTCATAGAAAGATTCTGTCCATATGCTTCTAGAATAGCCATGCATATAGTTCAAAAATTATTTTTCTAATATCAGAATTTAAGTATAAGCATACAGGATCGGTACTAAATGTAAAGGTTCAAATTTTGTAGTGGCTGGTGCATACATTTGGTTAAATCTAATGATAGCTGGAGCGCAGTGTGAATTCCATTTGCTGAAGTACATATTATTATGCTGAACATGATGCAGGGAACCATAAATATCTCAGCAACATACGAGACCAGGCACCATGACTTTGAGACTTCAGTTGTTGCACGTGGGGACCTTTGGAGGTTGGAGTCGTCGCGTGGTGGTTCAAATTCTGGCGATGAAAATGCTCCGCTTTTCCTTGTTCAGCTGGGACCTTTATTATTTGTTCGTGACTCTACACTTCTTTTGCCTATTCATCTGTCAAAGCAGCACCTTCTTTGGTATGGCTATGATCGCAAGGTACTTTTCTTCCCAGCTACCCAGGTCTTGATCTGAAATCTTACATGCCATAAACTTTTTGCATCATAGTGTTTTAGAATCTCAATGATATAATTATGGTGCAAATAATGCCTATCAACGTGCATTGGCTTGTATTTTGTTGCATACCCATACTAATAGTCTAAAACTTGTGTGTTTATTTTAGAACAAAATGCACTCCTTATGTCCAGCTATCTGGTCAAAACATAGAAGATGGATGGTGATGTCAATGATGTGCCTCAATCCTGTAACCTGTGTAAGTATGCATGTTCCTTCTTTGTCTTTTTCTTTCCTCAATTCCCCCTGTTTCCTAGTTGCTATCAGGTATCAGTTATTTTTATACTTCAGTATGATGGACTGGTTTTGCAAATCATCACTTTTCATGCTACGGGCATGCAAATCCAGTAACAATGTTTAACATACTTTACTGTTACATTTTGTCACGTGTATTCGTGCTATCAAATGATACATGTACTTATCGTGTTCTTTGTAGAAAGTTTCCTATATTGATGATTACTTTCTGATGCAATTGGCTGTGCAGTGACTTGATTTGGACTCGGATGTAGAATCTTGTATAACAAGAATATCAAACCTACTCATAACTTTTTGCAACAGTCTCATTTCTACCCTCATATTGTTAACTTGGCTATTTGTTTCAGTCTTTCATGGATGTGCAGTTCCCGAATGGACAGCTAACATACGTTGCTGGAGAAGGGATAACAGCAAGTGGATTTTTCCCATTCTTTGGTGGTTTGCTTCAAGCTCATGGAAAATGTCCTGGGGAAACAAGATTAAGCTTCTCCTTCAAGGTTAGTGTCTGCATAATAAGCCAACTGTAGCTCCACTTCATCCTTCCAAGACCTGTTCCTAATTATTTCACCTGCCATGCTTATTTCCTGTTGCTTTGCTTTTGAAGAGCAAACAAGGCACAAGGTTCACCCCTATGTTTCAATGGCCTGACAATTCTCTTTCTTTTGGAGTTGCACAAGCCTTAGCGTGGAAAAGATCTGGCCTTATGGTGAGGCCCAGCATTCAAGTCAGGTAGTTAGATATAAACACTTCTGCAACTCAAAGCCACGTTAGTCAGGCCCAGCACAAGGTTACTCGACTATATTTTTTTGGGTCCCACATTTATTTTCCACTTCTGATTTCCTTGATGGAACTACATGCATCAGTGTTTGCCCCACATTTGGAGGAAGCGATCCTGGGATACGGGCAGAGTTTGTCCATTCATTGAAGGAGGAACTCAATGTAATGTGTGGTTTCTCTTGTGCCAGACATCCCTCGGCCTTCACAGCTGTTTCTGTAAGCTCTCCAGATCATGTTACGCTTCTGTTTATAATCAAGCACACGCTTTACTTTACTGCTAACTGATGTCCTTGTGTGTTGCTATGCATCCGCAGCTCGGGCGATCCAAGTGGAATGGACAAGTCGGCAGTTCAGGACTAGTAATCACCTTGGAAACACCGCTGGACAACTTGGCTAGACCATCTTTATCTGTTCAATTGAATGGAGGTTTTGAGTTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017682