BGIOSGA017683

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Revision as of 02:23, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017683| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017683, complete gene.| tag = OS05G05...")
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Gene Name

BGIOSGA017683

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017683, complete gene.

LocusTag

OS05G0529900

Ensembl Transcript ID

BGIOSGA017683-TA

Ensembl Protein ID

BGIOSGA017683-PA

Length

5015

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27740920..27745934

Sequence Coding Region

27745923..27745934,27744060..27744120,27743842..27743900,27743641..27743715,27743042..27743149
,27742307..27742377,27741908..27742208,27741082..27741371,27740920..27740980

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27740920..27745934 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27740920..27745934 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAAACGATGAGTACATCAGGATCCGAGAGCGATTCGGTGGCCGCAAAGCGATCCATGAAGCCCAAGTATTCTAAGTTCACGCAGCAGGAGCTTCCGGCATGGAAACCACTATATACTCCTGGAATTGTCATCGGGGCCTTCTCGCTCATCGGCATCATCTTCATACCGATAGGGCTCGTTTCAATTGCAGCATCACAGGAGGTTGTTGAATTGGTGGATAAATATGATGGGGAGTGTGTGACGGCTAACGACAAGGTCGGGTTCATTCAGGACACCAAGACTGACAAAGCGTGCACCAGAACGATTACTGTGCCAAAACCTATGAAAGGCCCCATACAAGTTTACTACCAGCTGGAAAACTTCTACCAAAACCATCGGCGATATGTCAAGAGCCGGAGCGATAAACAGCTGCGGTCCAAGGAGTTCTCAAGTGTGATAAAAACTTGTGATCCTGAAGCCATCAGTGAAGGCGGAGCCCCTATTGTTCCATGTGGCCTCATAGCATGGAGCCTGTTCAATGACACCTTCACATTTTCTGTCAACAAGAAGACTGTCCAAGTGAACAAGAAGAACATAGCTTGGAGCAGTGACAGGACCATTAAGTTTGGCAGTGATGTTTTCCCCGAAAATTTCCAGAAGGGTGGGCTCATAGGTGGTGGTCAGCTAAATGAGAAATTACCATTGAGTGAGCAAGAGGATCTCATTGTCTGGATGAGAACAGCTGCACTCCCAACATTCAGAAAGCTCTACGGCAGAATCGAGACGGATATAATGGCGAGCGATGAAATCACAGTGGTGATTCAGAACAACTACAACACGTACAGCTTTGGAGGCACCAAGGCGCTGGTTCTTTCTACCACTTCTTGGATCGGCGGCAAGAACAATTTCATCGGTTTCGCGTATGTGGCGATCGGTACCATCTCCTTCCTCATCGCCTTGGCCTTCGTTGGTCTCAACATGGTTAAGCCAAGGACACTTGGAGACCCGTCTTACTTGTCTTGGAACAAGGAGAACCCAGATTATGTCCAATGA</cdnaseq>

Protein Sequence

<aaseq>MAETMSTSGSESDSVAAKRSMKPKYSKFTQQELPAWKPLYTPGIVIGAFSLIGIIFIPIGLVSIAASQEVVELVDKYDGECVTANDKVGFIQDTKTDKACTRTITVPKPMKGPIQVYYQLENFYQNHRRYVKSRSDKQLRSKEFSSVIKTCDPEAISEGGAPIVPCGLIAWSLFNDTFTFSVNKKTVQVNKKNIAWSSDRTIKFGSDVFPENFQKGGLIGGGQLNEKLPLSEQEDLIVWMRTAALPTFRKLYGRIETDIMASDEITVVIQNNYNTYSFGGTKALVLSTTSWIGGKNNFIGFAYVAIGTISFLIALAFVGLNMVKPRTLGDPSYLSWNKENPDYVQ</aaseq>

Gene Sequence

<dnaseqindica>1..12#1815..1875#2035..2093#2220..2294#2786..2893#3558..3628#3727..4027#4564..4853#4955..5015#ATGGCGGAAACGGTCGGTCTTCAGATGGGGGAGCTTTGGACGAACGGCTAAGAGCCAAAGGGAGGCTAAATCTGACTCGAGAACGCATTGCAGCCGGCCAGGATCTCAACATCTGGTGAAAGCTGCGTCGTGGAAAGTTTATGTTTCTTTCTGAACCATTTCTTTCTCCCATCTTCTCGCGTCGTTTCTTCATGCAGCCAATCAGGTTAGCTTGTCAAAATTGGCATATTCGTCGCTTCACCGGCTAAGAAAAACTACTACCTATAAGAGTATATCACGATTGAAAAAAAAAACTGCCCTTTCTTTTAACTGAAGAATGTCTATGAACATGCAAATATTCAGAGTTATCATGGCCGACCATGATAGTTTTGCAAAAGGGGACGGCAAAAAACTACTAGCACACAGAATGTTTGCAGAGAGGCCTTTCTGTGTTGTAGGTTAGGTCTTTAAATAATTCCGTAAACTACAAGGATGATGACATAAACTGCTCTGCGGAGAATATGCTTAGGAGATAAACACACTCAGTTATACTCGATCAAGATCCCCTGCTCGCTGCTTTCTGAAAGCATAACTCCAAACTGAAATAGAGCTCTACGTAGCAACTTTGTCAGTGGAGAATGTAGCCCATCATTTCAAGTACTGGACAGCAAATATGATACTGAACAGCAGCATGATTCTTCGGGTTTCTTTCTTTGATTAGCGAGACCCAAACCACGTCCATTATCCACAAAACCACGTGCTCCATCGGTTTGACTACTACTATTTCTAATTTTTAATAGATGATACCATTAATTTTGAAAATATGTTTGATCATTCATCTAAAAATAATTACATAAATATTATTTATTTTATTGTGACTTACTTATCATTAAGTGTAATTTAAAAGTAATAACTTACATTCTTTTTATATTTATACAAAATATTTTATAAGACGAATGATAAAATGTATATATACAAAATATCTTCGTGAATCTCAAGATATATTGGTTAGGATGTATATATGTGTGTTATAGGTGAGTGTAACGCATGTTTATATGATCTACTCCTCCGTTCCAAAAAAAAAAAAATACTTAATCCTAGATTTGAACCTGAACACCCAAGTTTGTTTTTTTTTTTTATGAAGAGAGTAAGCGCTTAAAAAAAAGGAAGTATACATCCCACGGACACCGCAGTGGCTCCAATGCTCCATCAACGCCGTCCATCCGCAACAGTCGGCTCATCCCAGCCACCGGAGAGCTGAACGGCGGAGAAGACGACCAACCCAGCCGTACGCCGTCGTCGTCGTCCTTGTCACCGTCACCCCCAGCTTGCATCCGCCCACTGTCACCGTGTCAGCGTCGCGCGCGTCGCTGCCAGCTCGTGGGCGAAAAGGCCTCGTGCCGCACAGCACAGCGCGCGATTGGACGTACGGTTTCGACGAGCAAAGTAGACGCGCGCGGCGACGGCGGAGAGGAGCGGAGCTCCCGCGCGCGACGTGGCGCAGCGCGTGGAGGAGAGGAGTCGCCCGCGTTTTCACTCCTCCGCCTTTGTAGCGTTCGCGGGGATGGGGACAGAAACGAAGGACGATACGGATCCCATCCCATGCCGCAATCGCCGTCGCCTTCGATCTTCTCAGAGGAAAGGAAGGAGGAAAGAAGGAGACGATCTCCCTGCGTGATTGGATCCAACCAAAAACATAAGACATAATATACGTCCTAGGTTGTGATTGGATCTAGTGTGCTCGCGTGTTCTTGTTCTGATTAGGGGGCGTGATGTGACTACGAATTTGATTGAGTTTTGATTATTATTAAATTTTTTTCATTTTCTTTCTTTAGATGAGTACATCAGGATCCGAGAGCGATTCGGTGGCCGCAAAGCGATCCATGAAGCCCAAGTGTACGTGCCCATTCTTGCCCCTGTCTCTTTAATTGTTCTCTGATTTTCTTTTGTTTGGTTTGGTTACATGTCTAAGATGAAATGTCGCCATGTGTTTGGAAATTGATGAGAGTTTCAGTTCAGGGTTCTTTCTTTGTTTTTTTTTTCTTTCTCCTGCAGATTCTAAGTTCACGCAGCAGGAGCTTCCGGCATGGAAACCACTATATACTCCTGGAATTGTATTTACTCCCAATCTCTACATTCTGTTCTTAATTTCTTCCTGCGCTATCAAATTATTTTTATCCCAAAAATGGAGTGCTAGATTTTAGCAATCTCTGAATAATGTAACCTGGCTCCATGAATAGGTCATCGGGGCCTTCTCGCTCATCGGCATCATCTTCATACCGATAGGGCTCGTTTCAATTGCAGCATCACAGGAGGTAATTGCACAGATATGCAACATGTATTCTTGAATTCTGATTATTTGACTATTCCGGCACTACGTGAAATACATTTCTGCTTATATTTATTAACTAGCTAAATGTCCGTACTTTGCTACGGTTAAATGAAAATGTATTAATGTGGTGTCCATCTTTTTCTATAGAGAATATTCATCTTAATCTAAATTTTTATGTATCTATCCATTTAGATTTGATTTTTTAATAATATTAAGAAGTTTAAGGGATAACTTAATAAAATTTACAATGGAAGTAGGTGGGGTGACTGATTCACGGCCACCACCATTAACTTCTTTTAATGGTAATTTTTATCATTCTTAAGGACAATAGAATTTCTCTTCTTTCAAAGAAGTATAGATAGTCTGGCTTGCAACGGTGGATTAAATTTGTATTTAAACTCATTTCTTTTAATACAGTGACGTTGCAAAGTTCTTACGCGTTTGTCAAAAAGAATAATCTGGCTTGCCATGCAGGTTGTTGAATTGGTGGATAAATATGATGGGGAGTGTGTGACGGCTAACGACAAGGTCGGGTTCATTCAGGACACCAAGACTGACAAAGCGTGCACCAGAACGATTACTGTAAGTTTATGCCCGTTCGTTTCCTTGTTTGACAGTTGCAACTTCCTTGTTTTTCATTAACTTACATCTTAATACTAAACGTGTGTTTTTTATAGTAGAAGTTTCTTTAGAAAATCAATAAATATATTTTTCAAGTTTATAATCATTTACTTTCAATTAACTATGCATTAATGGCTTGCCTCGTTTTACGTCAAGAGAAAAACTAACAGCTACTATGGTGGTGTTTGGATCCAGGGACTTAACTTTAGTCTATGTATTTAGACACTAATTTAGAGTATTAAATATAGACTACTTACAAAACTAATTACATAAATGAAAGCTAATTTGCGAGATAAATTTTTTTAAGCCTAATTAATCCATAATTAGAGAATGTTTACTGTAGCATCACATAGGCTAATCATGGATTAATTAGGCTTAATAGATTCATCTCGCGAATTAGTCCAAAATTATGGATGAGTTTTATTAATAGTCTATGTTTAATATTTATAATTAGTGTTCAAACATCCGATGTGATAGAGACTTAAAAGTTTTAGTCCCATCTAAACAGGTCTATGTTCACTAGAATTGAGCCTTAGATGACACAACTACACAACATGGTTGCCCTTAGCTCTTACCAAATTTATAGTATCCAGTAAATAATGATTTTTCTTTACTCATTTTTCAGGTGCCAAAACCTATGAAAGGCCCCATACAAGTTTACTACCAGCTGGAAAACTTCTACCAAAACCATCGGCGGTATATATACGCTAGACCTGGATGAGTGATTTCAACTTAATTAACTGGCCATTGTGGTACCGAAATGAACACTACCGTACAACAATCTTAATTCTTAGATATGTCAAGAGCCGGAGCGATAAACAGCTGCGGTCCAAGGAGTTCTCAAGTGTGATAAAAACTTGTGATCCTGAAGCCATCAGTGAAGGCGGAGCCCCTATTGTTCCATGTGGCCTCATAGCATGGAGCCTGTTCAATGACACCTTCACATTTTCTGTCAACAAGAAGACTGTCCAAGTGAACAAGAAGAACATAGCTTGGAGCAGTGACAGGACCATTAAGTTTGGCAGTGATGTTTTCCCCGAAAATTTCCAGAAGGGTGGGCTCATAGGTGGTGGTCAGCTAAATGAGAAATTACCAGTAAGTGCAGTCAAATCAATCATCTTTATCACACTAGACTGCTCTTTTCGTGCTAACGCGAATATTAGGGAATAACATAATATCGAATAATTAGAAGGAGTGAGGCTTCGAACTCAGGTCGCCTAGCCCACCACCTTATTGAGCTAGCCGGAAAACCCCTAGGCGTTTCTCGTGCTTTCTTTTTTCTTGAACTGAATTGTCCTCCATATTCAGTTGAGCAAGCTTTCTCTGCACTTAAATAGGTGGCTCTCCATTGTTCGCTCTTCATCTTATCGGTCATAGCTAAAATTTAAATTTTCAAACTTAATTTTAAAGTTTATTAAAAATTTTTTATCGTAGTTTATTTTCTATATTGATTTTTTAAGTCGCTAAACACACATAAGGAAAAGTTTTGCCCTATAAATTATATTTTTATCGTTAATAAGCATTATGGCCTATAATCGGCTGCTGGAAGTAAATTTAGTTACAGCTTTATCACACTAGACTGCTCATTTTCATCATTCTTTTTTTTTTCTGAATTCTCCTTCATGTTTCAGTTGAGTGAGCAAGAGGATCTCATTGTCTGGATGAGAACAGCTGCACTCCCAACATTCAGAAAGCTCTACGGCAGAATCGAGACGGATATAATGGCGAGCGATGAAATCACAGTGGTGATTCAGAACAACTACAACACGTACAGCTTTGGAGGCACCAAGGCGCTGGTTCTTTCTACCACTTCTTGGATCGGCGGCAAGAACAATTTCATCGGTTTCGCGTATGTGGCGATCGGTACCATCTCCTTCCTCATCGCCTTGGCCTTCGTTGGTCTCAACATGGTTAAGCCAAGGTATGGCAAAATCGCTTGCTGGATTGGATTCCAGGGCAAACTGTAACTAAACTCTGAAGAAACTTTGCCTCTGAAAAATCTGAATGCTTGTTCGGTTGCAGGACACTTGGAGACCCGTCTTACTTGTCTTGGAACAAGGAGAACCCAGATTATGTCCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017683

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