BGIOSGA017685

From RiceWiki
Revision as of 02:23, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017685| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017685, complete gene.| tag = OJ1187_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017685

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017685, complete gene.

LocusTag

OJ1187_E11.17

Ensembl Transcript ID

BGIOSGA017685-TA

Ensembl Protein ID

BGIOSGA017685-PA

Length

2464

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27703516..27705979

Sequence Coding Region

27705889..27705979,27705531..27705796,27704531..27704646,27703775..27703848,27703627..27703690
,27703516..27703552

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27703516..27705979 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27703516..27705979 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGCCTTTCGGTTCCTCGGGGACATGACCCACCTCTTCTCGGTCCTCGTCCTCCTGCTCAAGATCTACGCCACGAAATCCTGCTCAGGGGTGTCGAGGAAGACGCAGGAGCTGTACATGCTGGTGTTCGTGGCGAGGTACATGGACCTGTTCACGGACTACATCTCGCTCTACAACTCGGTGATGAAGGTGGTGTTCATCACCAGCTCGGCGGCGATCGTGTGGTGCATGCGGCGCCACCCACAGGTGCGGCGCACGTACGACAAGGATCAGGACACCTTCCGCCATGTGGTGCTCGTCGCCGCTGCCTTCGTGCTCGCATTGCTCTTCAACGAGCGGTTCACCTTCCGCGAGATCTGCTGGGCATTTTCGATTTACTTGGAGGCAGTGGCAATTCTCCCTCAGTTAGTTTTGCTGCAGAGAAGTAGAAATGTGGACAACTTGACTGGACAATATGTATTCTTCCTAGGGGCCTACCGTGCATTTTACATCCTAAACTGGATTTACCGTTACTTCACTGAGGGTCACCACAGCAGATGGATCCCTTGGATTGCTGGTTTGGTCCAAACAGCTCTTTATGCGGATTTCTTCTACTACTATTTCTTAAGTTGGAAGAACAATGTGAAGCTTGAGTTGCCTGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MNAFRFLGDMTHLFSVLVLLLKIYATKSCSGVSRKTQELYMLVFVARYMDLFTDYISLYNSVMKVVFITSSAAIVWCMRRHPQVRRTYDKDQDTFRHVVLVAAAFVLALLFNERFTFREICWAFSIYLEAVAILPQLVLLQRSRNVDNLTGQYVFFLGAYRAFYILNWIYRYFTEGHHSRWIPWIAGLVQTALYADFFYYYFLSWKNNVKLELPA</aaseq>

Gene Sequence

<dnaseqindica>1..91#184..449#1334..1449#2132..2205#2290..2353#2428..2464#ATGAACGCCTTTCGGTTCCTCGGGGACATGACCCACCTCTTCTCGGTCCTCGTCCTCCTGCTCAAGATCTACGCCACGAAATCCTGCTCAGGTGAGCCCGAGCCGTACAGTGGTGGTAGGGTTTCGGCCGCTTGGTTGGGGGTGGGGGGGATTTTCCGCTCACGGATCTGTGTGTTGGCGCAGGGGTGTCGAGGAAGACGCAGGAGCTGTACATGCTGGTGTTCGTGGCGAGGTACATGGACCTGTTCACGGACTACATCTCGCTCTACAACTCGGTGATGAAGGTGGTGTTCATCACCAGCTCGGCGGCGATCGTGTGGTGCATGCGGCGCCACCCACAGGTGCGGCGCACGTACGACAAGGATCAGGACACCTTCCGCCATGTGGTGCTCGTCGCCGCTGCCTTCGTGCTCGCATTGCTCTTCAACGAGCGGTTCACCTTCCGCGAGGTGATGTGGTCTGACCTTACTTTGCTTGTTCACCGCACTGTTGAATTGATGCTGCAATGGGACGCCTGATAAAGTGGTTAATTCTGCTGAACCTATGTGCATTAAGAAATATGATATATCTGCTTAATATGTTTTCCCATGCTACATTTCGTTGCTAGGAACCGTAATTAAAATTCGTGTACAAGGCTGCTAGTGCTGTGCAATGTAACCTTAACAAATTTATCTCAGTATGAGCCACCCTAGCAATCTGAGTTCACAGTTTGCACTGACTTGAACAAGACTATAGGCACAATCATCGTTTTGTTCAGTGCAGTGAAGAATTGTGGATACCCTATTAATAAAATCCTACTTAAGTAAGGCAATGCAGACTGCCGACAGATGTTTGTCGATCTATATGCTATTTGCTGATGTTGTATTGTTGTTAGACTTCAATAGTGGTCAAATGCCAGACAATTTCTCAGACCTCATTCTAGTTGTTTTCAAAGAACACTGCTACAGTAGGAGACTCATCTGAAGGTAGCATATCCATAGAATGTAACAAAAGGTCAGGTGAATAACACCTATACCTATTGAATTAATTTAGAATTTTAGAAACCTATGTATTATTTGCTCAGTATACATCATCCTGCACTAATCAGGATTTCTTCCCTTTGGGTAAATAGAATCTAATCCCATTTTTCTGTAGTTTCACTTGTATGGTACAGATTATATTCTTCGAAGTGGCCACTTTTTTTTTCTAGAGCACACATACTTCTTCCTCTTGTTTCTACTGGAACCAATTAGTCAGAATGATGCATAGTAAAGTAGCAAATTAGTAAAACACGGTCATGTTGCATTTACATTTGTTAGTATGATACACAAATTAACATAATTTCACCGTTCAGATCTGCTGGGCATTTTCGATTTACTTGGAGGCAGTGGCAATTCTCCCTCAGTTAGTTTTGCTGCAGAGAAGTAGAAATGTGGACAACTTGACTGGACAATATGTATTCTTCCTAGGGTATGAGTTTTACCACACAAGCTTTTTACCATAACATATTTATACATGATTCCTGTATTACAAGAGAATGAAACATGTTTGCTTTTCATGCTTCAACGACTTCTGTTGCAGTCTCCAAGTTTATGATGGAAACATGAAATATATGCATGCATTAACTATTTAGTTTTTGTTTGGTCCTTAGGCTTGAGAATATTGAATATGCATGTAATTTTTTTTTCTTTATGGACATATGACATGTCACATGTTCCTTCTGTCCATTTATATTGCTGGTCATAAATTTTGGCACATGAAATGCATCCCATCTATTCTTTTTTTGACGTAAGAAGGTAGAGCTGGCTCTACCTTATAGCCATTTCCTTAATAGAAATGAGGTAGTACAAAGTTTTAGTGAAGGAAGTAAAAAAAAGGAAACGAAGAAGAAACGGAGGGGACTTTACATTAGTTTTGGTATTTACAGATTTAAGGTTCTATCTGCAGTAGCTGCATCCCATCTATTCTTAGTTCTCTTTCGTGGATCTTCCATTTTTCCTGGCTAGTTCTAGGCTTGATTAATTAAGCCTACATTTTTTTAATATACATTGTGTCCAGATTCGGATTAGGGCATGCTTTAAATAGTGAACGATCGACATGCTTCTAGGTTCCCAGTTGGTCTCTTTCAAGCCTCACAATACTTGTTTTGCAGGGCCTACCGTGCATTTTACATCCTAAACTGGATTTACCGTTACTTCACTGAGGGTCACCACAGCAGATGGATCCGTAAGCGCCTGCCCCTTGTATGCTTGTGTTTCATATCCCATGTTCTATATATGAAAAGAAGTTCTGACGATCTGTTTCTTCCAGCTTGGATTGCTGGTTTGGTCCAAACAGCTCTTTATGCGGATTTCTTCTACTACTATTTCTTAAGGTAAACTGGATACTGTTGTCAAACATCATTTGCAGACTCTCTGGGTACTGACAATTCCATGTCGGTTGTTGCAGTTGGAAGAACAATGTGAAGCTTGAGTTGCCTGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017685