BGIOSGA017739

From RiceWiki
Revision as of 02:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017739| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017739, complete gene.| tag = OsI_205...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017739

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017739, complete gene.

LocusTag

OsI_20589

Ensembl Transcript ID

BGIOSGA017739-TA

Ensembl Protein ID

BGIOSGA017739-PA

Length

6350

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26806845..26813194

Sequence Coding Region

26812983..26813194,26811497..26811671,26810376..26810459,26810022..26810290,26809739..26809973
,26809011..26809090,26808826..26808910,26808244..26808375,26808049..26808162
,26807715..26807762,26807226..26807310,26807056..26807112,26806845..26806966

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26806845..26813194 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26806845..26813194 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTCCGCGAGAAGTTGGTTCCAGAAGTTCCAGCCGAGGGACAAATCGAAGAGTCCAGCGGTGGCTGCCAGTCATGGAAAGGATCCAGGAAAGCCACCAATTGATGACGCGCCATCTAGTGCAACAAAACAGAGGGTTGCCGCGGCAAAACAGTACATTGAGAATCATTACAAGACCCAGATGAAGTCCCTGCAAGATAGGAAAGAAAGGCGCTGGATGTTGGAGAGGAAACTACAGGATGCAGAGGTTCCTGTAGAAGAGCAAAATAATATTCTAAAGCATTTGGAGAAAAAGGAGACCGAATATATGCGGTTGCAGAGACATAAGATGGGGGTTGAAGATTTTGAACTTTTGACAATTATTGGAAGAGGTGCATTTGGCGAGGTGCGTCTTTGTAGAGAGAAGGCGTCTAAGAATGTATATGCAATGAAAAAGCTTAAGAAATCTGAGATGCTTCGTAGGGGCCAGGTTGAGCATGTCAAAGCTGAAAGAAACCTTCTTGCAGAAGTTGATAGTGCTTTTATAGTCAAGCTCTACTATTCTTTTCAAGATGAAGAATACTTGTATCTCATCATGGAGTACCTTCCTGGTGGTGACATGATGACTTTGCTTATGCGCAAGGACACACTGACAGAAGATGAGGCCAGATTTTACATTGCAGAAACCGTATTAGCAATAGAATCTATTCACAAGCACAGCTACATTCACCGGTATCAAATAAGTGTTCCCAAGTTTTGGGATATCAAACCAGACAATCTATTGTTAGATCGCAGTGGTCACTTGAAGCTTTCTGACTTTGGATTGTGTAAACCTTTGGATAGCAGTAATTTTCCAAATTTGAATGAGCCAGATTATACATCTACAAAGGGCACCAAGCCTTTACCTGATAGTAGCAGCCGGTTAAGCTCTTCTGCTCCAAAGCGCACACAGCAGGAGCAATTGTCGCATTGGCAAAAGAACCGACGAATGCTGGCATATTCAACGGTTGGTACTCCTGATTACATTGCTCCAGAGGTTCTGCTGAAGAAAGGATATGGAATGGAATGTGACTGGTGGTCCCTTGGTGCAATTATGTATGAAATGCTTGTTGGTTATCCTCCATTCTATTCGGAGGATCCAATGTCAACCTGCAGAAAGATTGTAAACTGGAGAAGTCACTTGAAATTCCCTGAAGAGGCAAAGCTTTCTCCTGAAGCTAAGGATCTCATCAGCAAACTTCTATGTAATGTTGAGCAGAGACTTGGAACAAAAGGAGCCCATGAGATAAAAGCACATCCATGGTTTAGAGGTCTCCCATGGGAAAGATTGTATCAGATGAAAGCTGCTTTCATACCAGAAGTTAACAGCGAGTTGGATACTCAGAATTTTGAGAAATTTGAGGAGACCGGAGCACAAATTCAAAGTTCATCTAAGTCAGGTCCATGGAGAAAGATGCTTCCGTCCAAGGATGCAAACTTTGTTGGCTATACATATAAGAATTTTGAAATTGTAAATGATGATGAGGTTGCAGGAATTGCTGAGTTGAAGAAGAAGAGTTCCAAGTCAAAGCGGCCAACTATCAAGACATTATTTGAGAGCATGGATGAAGATGAGCCTGTTCAAGGAAGTTTCTTAAATATGTTGCCCCGTAAGGAGGGGCAACCTTCATCTCACTCCACCATTCCACCAGAACAATACCAACCTCGACATAAATAG</cdnaseq>

Protein Sequence

<aaseq>MDSARSWFQKFQPRDKSKSPAVAASHGKDPGKPPIDDAPSSATKQRVAAAKQYIENHYKTQMKSLQDRKERRWMLERKLQDAEVPVEEQNNILKHLEKKETEYMRLQRHKMGVEDFELLTIIGRGAFGEVRLCREKASKNVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAFIVKLYYSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYIAETVLAIESIHKHSYIHRYQISVPKFWDIKPDNLLLDRSGHLKLSDFGLCKPLDSSNFPNLNEPDYTSTKGTKPLPDSSSRLSSSAPKRTQQEQLSHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSEDPMSTCRKIVNWRSHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAHEIKAHPWFRGLPWERLYQMKAAFIPEVNSELDTQNFEKFEETGAQIQSSSKSGPWRKMLPSKDANFVGYTYKNFEIVNDDEVAGIAELKKKSSKSKRPTIKTLFESMDEDEPVQGSFLNMLPRKEGQPSSHSTIPPEQYQPRHK</aaseq>

Gene Sequence

<dnaseqindica>1..212#1524..1698#2736..2819#2905..3173#3222..3456#4105..4184#4285..4369#4820..4951#5033..5146#5433..5480#5885..5969#6083..6139#6229..6350#ATGGATTCCGCGAGAAGTTGGTTCCAGAAGTTCCAGCCGAGGGACAAATCGAAGAGTCCAGCGGTGGCTGCCAGTCATGGAAAGGATCCAGGAAAGCCACCAATTGATGACGCGCCATCTAGTGCAACAAAACAGAGGGTTGCCGCGGCAAAACAGTACATTGAGAATCATTACAAGACCCAGATGAAGTCCCTGCAAGATAGGAAAGAAAGGTAGGCGACATAATTATATTTCTTGCTACTTTTGCCTGGTTGTATTTCTCGCAAAAATATATTTTTGGCATTTTGCGTATATGTAACGGAATTTGTTATTACCGTTGTACTGTACCATACAAAGAAGAGAAATTAGACCAGCAAAGGCCACCTTTTGTTGTTGTTTGGTAGGGCACCTGACAACACATCACACTTCGTAGGTTGTGATTTCAATGGTAAATACATTTCTGGGTAATTGAACAAGATTGCGCGTGTGTGTGCATGTGTGCCCTTGACACTGCCAAAAAAAGGAAGCTTGATTGATTGGGTAGCTTTCCTGACTAGCGCTCGTGTTAGTAACAAATAAATGTTGTCCTAGTAGATTGTTCAGCCAAACAAATTTAATTTAGAAAAGAAAATATATTCATCAATATTTAAATTAGTTATTTGAAAGTGATATGAGTTTATTTGCCTTATCCAAAGTGATGCTTGATGCGACTGAAAGGAGTATATTGGTTATCTTGTAGGGTTACACAAGCGGCTTCTTTTTCTCAAAAACGCTGGACAGTTGCATTTCATTTCATTAAGAGAGAAACATATATACAAAGGAGGGGCCAAAAAGCCCCGCAAGTCACAACAAGCCCAAAACACATCACACCGAGGTGATGCTGAACCCAGAAAAAAAAACCCCTCCTAGACTACCTAGGCGTTCGGCGCAAATATCTTAGAAAGAAACTCCTGAAGCGCACGAGCCCCAGTTAAGCACCATAGGCTACTATCATTTGACACCGCTTGCAAAACCACTGTGACATTGGGAGAGGCCTCATTGAACACACAATCATTGCGATGCTTCCAAACCTCCCAAGCTACTAAAATGATCAAAGAATTCAGCCCCTTCCATGAATCTTTATGAATCCCTTTAATAGCCTTGCACCACCCAACTTGAAAAACTCAATTCTGAAGATTGTATCTCGCACACGTTGTAAAAGCTGTAACTCGCACATGACTTTTAAATGGTTCATTGAACTCACGCAATTTGTGTGGGTATACCCATTTTGGTTGCTTTCCCCTTTTCAGGGTTTTTGATTTTGACGCCACCGCTTTTGATTTTTATGCTCTAACAGTTTATTTTAATAATCCATGATGAGCTTTTTCTGCTCATACTCAATTTGAATTTCTAATTGTCTTTGCGCACTATTACTTCTTTTTGCATCACTAGAAAATCATATCAACCTGCTTTGTTCCTATTATGGGTAATTCACTTCCTTTTATGCCCATTCAATGGATGACATTTTGTTGCCAGTCCTCTCTGATGTGTTCATTTGCTTTTAGGCGCTGGATGTTGGAGAGGAAACTACAGGATGCAGAGGTTCCTGTAGAAGAGCAAAATAATATTCTAAAGCATTTGGAGAAAAAGGAGACCGAATATATGCGGTTGCAGAGACATAAGATGGGGGTTGAAGATTTTGAACTTTTGACAATTATTGGAAGAGGTGCATTTGGCGAGGTACTTCTGATCTCAATTCCATACACAGGACCTTAGCAAATTTCTTTTGGAGCACAAGAACACTAGATGTGCTAAGATTTCTTTGTGGCCTTCTATTTACATCCTGTTAACAGTAGGTTCAGTTAGAATCATGGTCGACTTGCCATTTTTTGCTTATGCAATGTCTGTAGTATAAATTTGGATCTCTTTTATGCTTAGAAAAATGTGCTGCCTTGCTGCTCCTTTTTGCATGATGCCATTTAACATGGAAGTGTTCTGACTGAAAAAAAATGGGGAAAATGGGAGTTTTTTTAATTGTTTGAAAAAGGGCTGCTTTCATGAAAAAGGGAAAATGTGAGTTTTTTTAGTTTATTTGTTATATCTGGTTTCCTGATGGGTCACACTTTGGTCCCCTATAATGATGGCATTCAATTCGTCAAGTGGTCCTAGGCCATTCATTTGTCTTCTGAATTCTAATCATTCTCCCGATACATATTGTAAAAGGAAAATAAAAGGAAGGAAGTCAAGGAACTCTGATTTTCCCAGCTTATGTTCTGCTTAAGGACCTAATATAGTATACCACTTTATCATAGGCTCAAGTCTACATGTAATCCCTCCTTTCTTGTGTATTCGAGAGAAAAAAAACATGTAATCCCTCCTCAAGTCTAGATGAAACCTGGTCTAGACTTTTATGCCCTGCCTCGTCAATCTTCAGTGTCTTCCACATAAATTTATTTGAGTGAGAAATAGGGTCATGTCTTTTTATGCCTATAATCTACCATTAAACTTAAGACAAATAAAAAAGGCATGTGCTTAGTGTCCAACAAGACTTTGTATTTATTATTTTTATTCCAGATTTAACCCTTTTTAAATAGAAGATTCTTATGTTTCTTCCTTTTCAACAAGAGAATAGGATAAATATGTCTATTTGCTTAGTGTGGTAGATCTATGCAGTTCTGAAACTACTATATCTAATCGTCATCAATTATATGTACTTACTTTTGAGGCCATTTAAATGTGCATCGCTCTTGATGTCACTGTAAATTGTAATTATGCAGGTGCGTCTTTGTAGAGAGAAGGCGTCTAAGAATGTATATGCAATGAAAAAGCTTAAGAAATCTGAGATGCTTCGTAGGGGCCAGGTACCATGTATGGTCTGGCTGCATTATTTTGTAGTTTCTATTTCTGATTTACACGTATGCTTTGACATGGTTGTACAAATTTCAGGTTGAGCATGTCAAAGCTGAAAGAAACCTTCTTGCAGAAGTTGATAGTGCTTTTATAGTCAAGCTCTACTATTCTTTTCAAGATGAAGAATACTTGTATCTCATCATGGAGTACCTTCCTGGTGGTGACATGATGACTTTGCTTATGCGCAAGGACACACTGACAGAAGATGAGGCCAGATTTTACATTGCAGAAACCGTATTAGCAATAGAATCTATTCACAAGCACAGCTACATTCACCGGTATCAAATAAGTGTTCCCAAGTTTTGGTAAGAAATTTGATGATTCCAAAGATAACCTTGGTGTTTTTTTTTCAGGGATATCAAACCAGACAATCTATTGTTAGATCGCAGTGGTCACTTGAAGCTTTCTGACTTTGGATTGTGTAAACCTTTGGATAGCAGTAATTTTCCAAATTTGAATGAGCCAGATTATACATCTACAAAGGGCACCAAGCCTTTACCTGATAGTAGCAGCCGGTTAAGCTCTTCTGCTCCAAAGCGCACACAGCAGGAGCAATTGTCGCATTGGCAAAAGAACCGACGAATGCTGGTAAGTAGCATATCTGAAACTGAATCAACTAATTGATATTTGATAGAACCTTGCCAATGTTGTGATGCCTGATGCCACATGCCCACATCAAGTTGATGCATTTAATAGTTTTTATAGTAAATTCACACTAGTTGTGAGCTTTTGTTTGAACATCTGGGCTAATAATACTTTGGTCTTTTACCTGGCATAAAACCACATGAAAATTATTTTGCTACGATGGATTTTCAAGATTCATTTGTGCTTCCTCAAGACAAGGTTTTTAGAGTCGGTGAACATTGAATATTTCTGAATAAAGAATATTTGCGTGCAGAAGCATAAATGATGCTATTCCTGGACAGACTTAATTCAGGCATTTGTGTACAATGTGCAGTGTTACAGTGCACGATTCCAAGGAAATAAAAAATTTCATGCTCTAAGCTTCAAAGTTTTAGTGGATTGTGTAAATCATGCATTATTTAGCTGTTGATGAAACTTGGTATTTATTATATGAAAAATCATTTAACGTTTATCTTGAATTTTTCACATTTTGCTCTCTGACTATGTTTTGCCACGTTGACAAGTGAATATGTACATGAGTCTAGTTTTCTAGGCTCTCATCAATATATGGTAGTATGCTTAGTTATACTCTTTTTTTTTTTTGGCATGCAGGCATATTCAACGGTTGGTACTCCTGATTACATTGCTCCAGAGGTTCTGCTGAAGAAAGGATATGGAATGGAATGTGACTGGTTAGTCTCTTATCTTGTAATTGTCCATAATTGTTAAGTCATGTTATTTTTCCTCATCCATGTGCTTCGTTCTTGTTCTCACATTTTATTTTGATCTTAGGTGGTCCCTTGGTGCAATTATGTATGAAATGCTTGTTGGTTATCCTCCATTCTATTCGGAGGATCCAATGTCAACCTGCAGAAAGGCATGTACTTTGCCCACAGTTTTTTTTTAATTTGTTATCTAGAGGGTAATTGTTTGGAATTTTCTATATTCAGTCTAAGCAAACCTCACCCAACTTGCAAGAAGACAACCTTATGCCAAATTTTATCGCACAATCAACACAGCAGAATGCAGTATTTGCCATAGTAATGTACTAGTGACCTGCATGTAATCAAATTATTATGTGGGTCAGTGGCTAGATGATGATGGTAGCAACTGGTCCTCGGAGCTCAGCCTATACAGTTTGTGGACTCCAATAATCACGCATGACCTTGGTTTTTCCTTATGAAGTGCCCTATAGTGGGAAAATTTTGTGGAAGGCTGTATTTCCCAATGCTTTCAGCTAAGCTTGTTTACTCCAGTACAGGAAATACTCATGTAGCTTCATGAGCATGTGTTTCATCCAATTTTATTTTCTATTCTTCATTTGCAGATTGTAAACTGGAGAAGTCACTTGAAATTCCCTGAAGAGGCAAAGCTTTCTCCTGAAGCTAAGGATCTCATCAGCAAACTTCTATGTAATGTTGAGCAGAGACTTGGAACAAAAGGAGCCCATGAGATAAAAGTGCGCTCTCTTCTATATGTACAATATCTTTATTGCTCTCAACTGTGTGCTTAATTATTATCGTCATATGCTCTACTTTAGGCACATCCATGGTTTAGAGGTCTCCCATGGGAAAGATTGTATCAGATGAAAGCTGCTTTCATACCAGAAGTTAACAGCGAGTTGGATACTCAGAATTTTGAGAAATTTGAGGAGGTAAATTTCAGTCGTTTTCCCATTGGTCTGATTCATGTGATAATTTGAGGAGGGATTTCGTTTCACCTTGTTTTATTAGGTTGTGATCTTAAACCTTGCTGCATTTAGCATTATGATTTTCTAATATGCATGACAACTTAGCCACGTTTTACATCGTCTCCATGGTAACATGTTTATTTCTGGTCTTTTGAGAGTGAAACCTAAAACTACGAGTATGCTATTTTGGTAAACTGTATAGAAAGCTGAAGTTATGACACCTGTACTTACCTTTCTTACTATTTTGCAGACCGGAGCACAAATTCAAAGTTCATCTAAGTCAGGTCCATGGAGAAAGGTATGTGTGACTTCACCATGAAATGCTAATTACTGAGTAGTTGGAAACACATTCCTAATAATGAAGCTGCATATGTGTTGGTCAAACAACTGTTATATCATATATATTTTACGGCAGCACGTGTGTCGCCTGTGCGACTCTATTTTCTGCTATCTGTAGAATGTAGATAGGGAACATACATAGCTTGACTAGTGATGGACCATGGGCATGAAGCTTGTGATTCACTGCTAGCTAGTCTGTAGCCATAAAAATATATAAAAAACTAGTATGTATTAGGAACATTTCCAAAATTTCCAACTATTGCTTTTAGGAGGCAGAAATTAACATGCTTAATTAGAGATGTTTCATTTTCGTATTGCCTCTTAGCCAATGAACTAAAACGAAGAGCACCGCTATTTTTGCAGATGCTTCCGTCCAAGGATGCAAACTTTGTTGGCTATACATATAAGAATTTTGAAATTGTAAATGATGATGAGGTTGCAGGAATTGGTTAGCACTCTCTCTCTCTCTCTCTAATGAAATTGTAAATGATGATGCCTTTCTTTAGATTATGCATTTTTAGTGTCTTTTGTTTGAAAAAAAATGTTGTGCTTATGGAACAGCTGAGTTGAAGAAGAAGAGTTCCAAGTCAAAGCGGCCAACTATCAAGACATTATTTGGTATTGAGCACTATTATTACCTATTGGTTCCTTATACACCATGTACCGTTTTTCATGATATGTTTAACTTGCTTTTATCCTTAAAACAGAGAGCATGGATGAAGATGAGCCTGTTCAAGGAAGTTTCTTAAATATGTTGCCCCGTAAGGAGGGGCAACCTTCATCTCACTCCACCATTCCACCAGAACAATACCAACCTCGACATAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017739