BGIOSGA017752

From RiceWiki
Revision as of 02:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017752| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017752, complete gene.| tag = OS05G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017752

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017752, complete gene.

LocusTag

OS05G0506900

Ensembl Transcript ID

BGIOSGA017752-TA

Ensembl Protein ID

BGIOSGA017752-PA

Length

1675

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26493374..26495048

Sequence Coding Region

26494980..26495048,26494672..26494767,26494154..26494399,26493805..26494041,26493565..26493630
,26493374..26493481

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26493374..26495048 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26493374..26495048 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGCGATCAGGGCGCCCAAGAGCCACCGCGCCAAGAGGGAGCTCCTCAAGCACGCGCCCAAGCTCTACTCCAAGAAGAATGAGAACATCAGGCCGTTCGAGAGCGGCGGCGAAACCTCGCTTGAGTTCTTCTCGCTCAAGACGGATTGCAGCCTAATAATATATGGTTCTCACTCAAAGAAGAGGCCCAACAATCTTGTTCTGGGAAGGACTTACGATCACCACATATATGACCTTGTTGAAGTAGGAGTTGAGAACTACAAATCAATTGAATCATATGTCTATGATAAGAAACTGGCACCTAAGCTTGGCTCAAAGCCTTTCTTTGCCTTCATTGGGGAGCACTTTGAAAGTGTTGAAGAGCTGAAGCATTTGAAGGAAATGCTGCTTGATCTTTTCAGAGGAGAGGTGGTAGAGAATTTGAACCTTTCCGGTGTAGATCGGGTATTTGTGTGCACAGCAATCTCCCCTACCACTGTCTACTTGATGCACTGTGCTCTCCGTCTGAAACGGTCTGGCACATCTATTCCTAGAATGGAGCTGGTTGAAGTTGGACCTTCAATGGACCTAGTAGTTAGGCGTCACCGATATCCGGCTGAAAGTTTGAAGAAGGAAGCAATGAAGACTGCCGATCATGCTAAGAAGATGAAAAATGTCATGAAGGATCCTGTGCAGGGCAAGTTGGGCAAGGTCTACATTCCAGACCAGCAGATTGCAAAGATGGCTTTATCAAACGACATCAAGGGGCTCAAGAGGGAGCGCCGTGAGGCCAAGAAAAACAAGGAGCACTCGAAGAAGCAAAAGATTAACGTTGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MVAIRAPKSHRAKRELLKHAPKLYSKKNENIRPFESGGETSLEFFSLKTDCSLIIYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVENYKSIESYVYDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEMLLDLFRGEVVENLNLSGVDRVFVCTAISPTTVYLMHCALRLKRSGTSIPRMELVEVGPSMDLVVRRHRYPAESLKKEAMKTADHAKKMKNVMKDPVQGKLGKVYIPDQQIAKMALSNDIKGLKRERREAKKNKEHSKKQKINVE</aaseq>

Gene Sequence

<dnaseqindica>1..69#282..377#650..895#1008..1244#1419..1484#1568..1675#ATGGTGGCGATCAGGGCGCCCAAGAGCCACCGCGCCAAGAGGGAGCTCCTCAAGCACGCGCCCAAGCTCGTGAGCGTCCCTCCCTCTCTCTACTCTATATCGCTCGCTGCTCCCCCGTGAGATTCCGGCCTGAGTTTTCTTCTCCGATGATTTTGGTTGAACCAGGTTGAGACTGGCAAGAAGACGCTTGTTCTCCATGGGACCAAGACCAGTGCGGTGCTGAACTCCGTGCTCGCGGATTGGTTCCACCTGAAGCGTGACTGCGTGATAATGCCGTCAAGTACTCCAAGAAGAATGAGAACATCAGGCCGTTCGAGAGCGGCGGCGAAACCTCGCTTGAGTTCTTCTCGCTCAAGACGGATTGCAGCCTAATAATAGTAAGTTTGAATTATCCTTAATATGATTTTTAGGTTGTTGTAATTGGCGCGAAGGAGTATTTTAGGTTGATTTGGTGGCATGGAGCATGTGTAGAACAACTGAATTAGCTACACCATGAATTTCTACCACTTGTACAAAACCTTTGAGAAACTTACTCCATGCTTTTATTTTATTTGTTTTCATGTATTGCGTGTAGCAGTAACTTCATTATTTGTTTTTAGAGACTATCTCTCTCCATTGTTTTAACTGTAGTTCTCCAATTCTGTTCCAGTATGGTTCTCACTCAAAGAAGAGGCCCAACAATCTTGTTCTGGGAAGGACTTACGATCACCACATATATGACCTTGTTGAAGTAGGAGTTGAGAACTACAAATCAATTGAATCATATGTCTATGATAAGAAACTGGCACCTAAGCTTGGCTCAAAGCCTTTCTTTGCCTTCATTGGGGAGCACTTTGAAAGTGTTGAAGAGCTGAAGCATTTGAAGGAAATGCTGCTTGATCTTTTCAGAGGAGAGGTGTGCATCTTTTTTATTTGCCGATTTGCACATTGTGAATAGATAATACATTGAGCTTTGGCATAACCTATTAACATGTTTGCTACTATTAACATGTTTGCTACTAATGTAGGTGGTAGAGAATTTGAACCTTTCCGGTGTAGATCGGGTATTTGTGTGCACAGCAATCTCCCCTACCACTGTCTACTTGATGCACTGTGCTCTCCGTCTGAAACGGTCTGGCACATCTATTCCTAGAATGGAGCTGGTTGAAGTTGGACCTTCAATGGACCTAGTAGTTAGGCGTCACCGATATCCGGCTGAAAGTTTGAAGAAGGAAGCAATGAAGACTGCCGATCATGCTAAGAAGGTAAAACCAATTGATAACTGTCTTTTTTCATTTCATTATTTCTAGGTTGCTAATAAGATTGCACCTTTGGTGCCATTAGCCTAAGCAACTATTGCCCCTTTTCTTGTGTTCATGCTAAGAAAGACCCTTCAGTCACCACTATGGTATTCACAATTACTATGGACCTTCTCGCAGATGAAAAATGTCATGAAGGATCCTGTGCAGGGCAAGTTGGGCAAGGTCTACATTCCAGACCAGCAGGTAAGTTTTGTTTCGCCTGCAGCTGTAAAGGTTGAACTTGCCTTTTGACATTCTAATCTCACTCATGGTTTTGACTGTTAAAGATTGCAAAGATGGCTTTATCAAACGACATCAAGGGGCTCAAGAGGGAGCGCCGTGAGGCCAAGAAAAACAAGGAGCACTCGAAGAAGCAAAAGATTAACGTTGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017752