BGIOSGA017753

From RiceWiki
Revision as of 02:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017753| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017753, complete gene.| tag = OsI_205...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017753

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017753, complete gene.

LocusTag

OsI_20553

Ensembl Transcript ID

BGIOSGA017753-TA

Ensembl Protein ID

BGIOSGA017753-PA

Length

2479

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26488267..26490745

Sequence Coding Region

26490505..26490745,26489971..26490198,26489465..26489613,26488988..26489261,26488267..26488502

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26488267..26490745 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26488267..26490745 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCAAACTTGTATTCTTCATCGTCCTCCTCTTCTGTATTTCTGGTGCGAGTTCTATCTCGCACTATTTCACCTCAATATTTTCCCTTGGAGACTCGTACATCGACACCGGCAACTTCGTGATCATGGCACCTTCCGGTCCACCATTGCGGTACGACAAGCTTCCTTATGGCATGACCTTCTTTGGCCACCCCACAGGTCGCATGAGTGATGGGAGAGTCATCGTTGATTTCATTGCCGAGGAGTTTGAGCTCCCTCTCCTTCCAGCCTCCATGGCGAATAGCTCGAGTGTCTCCCATGGCGTAAACTTCGCCGTCGGCGGCGCATTGGCGACTGGCATTGACTACTTCCAGAGGAACAATATTGTGTCGTTCAAGCTTCTGAACACTTCTCTGGATGTGCAGCTGGGTTGGTTCCAGCAGCTCAAGCCATCCATTTGCAACACCACTACTGAACAAGCCAATGGGTTCAAGAATTGTTTTGGTAAATCTCTTTTCTTCGTTGGGGAGTTCGGGGTGAACGATTACGACTTCCTATGGACGGCAGGGAAGAGCAAACAAGAGGTTGAGTCATATGTGCCACAAGTCGTGAGAAAAATCACGATGGGCGTGGAGATGCTCATCAACCAAGGCGCGATTTACGTGGTGGTGGCAGGGAATCCACCAAACGGGTGCGCACCGGCGCTTCTCACTGTCCTCATGAGCCCCAACAGGACAGACTACGATGGCCTCGGCTGCCTTCGCGCCCTCAACGGCGTGGCCAAGCGCCATAACATGCTGCTCCGTGTAGCTCTTGGCAGGCTCAGGGGCAAGTATCCCCATGCCAAGATCATCTTCGCCGACTTCTACCAACCCATCATCCAAGTCATGCGGAACCCTAGCCATTTCGGGTTCGCAAGCGACGGCCTTCTCAAGGCTTGCTGCGGCACCGGTGGCACCTACAACTTCAACGTCAGCTCCGCGTGCGCCTTACCTGGAGTGGTCGCTTGCAAGGATCCATCGGCCTCGATATCCTGGGATGGGATTCACTACACGGAGGCCATCAACCGGTTCGTTGCCAAGGGGTGGCTCTATGGTCCTTATGCTGATCCCCCAATTTTGACTGCTATCCACCACCATCGCTGA</cdnaseq>

Protein Sequence

<aaseq>MELKLVFFIVLLFCISGASSISHYFTSIFSLGDSYIDTGNFVIMAPSGPPLRYDKLPYGMTFFGHPTGRMSDGRVIVDFIAEEFELPLLPASMANSSSVSHGVNFAVGGALATGIDYFQRNNIVSFKLLNTSLDVQLGWFQQLKPSICNTTTEQANGFKNCFGKSLFFVGEFGVNDYDFLWTAGKSKQEVESYVPQVVRKITMGVEMLINQGAIYVVVAGNPPNGCAPALLTVLMSPNRTDYDGLGCLRALNGVAKRHNMLLRVALGRLRGKYPHAKIIFADFYQPIIQVMRNPSHFGFASDGLLKACCGTGGTYNFNVSSACALPGVVACKDPSASISWDGIHYTEAINRFVAKGWLYGPYADPPILTAIHHHR</aaseq>

Gene Sequence

<dnaseqindica>1..241#548..775#1133..1281#1485..1758#2244..2479#ATGGAGCTCAAACTTGTATTCTTCATCGTCCTCCTCTTCTGTATTTCTGGTGCGAGTTCTATCTCGCACTATTTCACCTCAATATTTTCCCTTGGAGACTCGTACATCGACACCGGCAACTTCGTGATCATGGCACCTTCCGGTCCACCATTGCGGTACGACAAGCTTCCTTATGGCATGACCTTCTTTGGCCACCCCACAGGTCGCATGAGTGATGGGAGAGTCATCGTTGATTTCATTGGTAAGTTGAGTAATGATCAACTAATTTGGCATTTCATGATTTTCTTTTCACATAGGCAAACCATGAATTAATTGTAATTATTTGAAGACAGAATAATCTTCAAATCTTCAGACTAATTTAGAGAGTGGGAAAGACAAATGAATCCCTGCAAAGATAACTCCTCTGAAAGACTGAAATCTCTCAACTTCCTAAAAATTATATATGCTACGAAAGGATAACTATTCAGTACCTGCATGCACGTATTTGCACGATTGATTTGGGTACTAAAGCTCTAACTATTCGTTGACATGCATGGTTAATTTGTAGCCGAGGAGTTTGAGCTCCCTCTCCTTCCAGCCTCCATGGCGAATAGCTCGAGTGTCTCCCATGGCGTAAACTTCGCCGTCGGCGGCGCATTGGCGACTGGCATTGACTACTTCCAGAGGAACAATATTGTGTCGTTCAAGCTTCTGAACACTTCTCTGGATGTGCAGCTGGGTTGGTTCCAGCAGCTCAAGCCATCCATTTGCAACACCACTACTGAACAAGCCAATGGTAAGTGGATGGGCATTGAAAATTCTCTCAACCATAGGGAACAAAATATGTATATATATATTATCTTCTCAATCATCGGAAATTATTACTCCCTCCATCCCATAATATAAGGCATGGTTAAATTTGGCACAATCTTCAAAACTAATCTTCGACTTAAAATTTCTCATATACTATAAGGTTTATTGCAACAAACAATAAATTTAAATATCAATCCAATGATATTAATTTTAACAAATAAAATTTAATTTATATTATAATAATTGCTAGTCAAATGTTTTTAAAGTTGAACTTTCGAATGTGTGCACGTCTTATATTATGGGATAGAGGAAGTATCAGAAAACTGATTGGTCTCTACAGGGTTCAAGAATTGTTTTGGTAAATCTCTTTTCTTCGTTGGGGAGTTCGGGGTGAACGATTACGACTTCCTATGGACGGCAGGGAAGAGCAAACAAGAGGTTGAGTCATATGTGCCACAAGTCGTGAGAAAAATCACGATGGGCGTGGAGGTATCCAGCACATTTTACTCTCTTATTTTTCAAAGACATCACGGTCATTTACTCTTTTTTTTTACCCTTCTTCTTATTCAAAGACATTACAGTCATTTACGAAAAATTTTTACTATTCTCATTACTTTAAAAGACTTGGAAAAGTCAAGTTCCAATCGTTGGGATCAAAAGAAAGATAATTCTATCTTAATATGAATATTCAGATGCTCATCAACCAAGGCGCGATTTACGTGGTGGTGGCAGGGAATCCACCAAACGGGTGCGCACCGGCGCTTCTCACTGTCCTCATGAGCCCCAACAGGACAGACTACGATGGCCTCGGCTGCCTTCGCGCCCTCAACGGCGTGGCCAAGCGCCATAACATGCTGCTCCGTGTAGCTCTTGGCAGGCTCAGGGGCAAGTATCCCCATGCCAAGATCATCTTCGCCGACTTCTACCAACCCATCATCCAAGTCATGCGGAACCCTAGCCATTTCGGTATGCTATATTCCAAGCTTTCTTGAAAGTAATATGCACCAACTAGTTCATACAATATACTACCTCCATTTCATATTATAAGTCGTTAAGATTTTTTTTACTCAAAATTCTTCAGATTTGATAAAGTTTATAGAAAAATTTAACATATATAACATAAATTGAGTTTTATTAAATGTAACATTGAATATGTTTTAATAATATGTGTTTTATGTCAAAAATATTGGTCAATTTTTCTATAAACTTGATCAAACTTTAAAAAAAGGTTAATTAAGAAAAATACTCAAAGCGACTTATAATGTAGTATATATTTTTTTCGTACGCAATCATAAGGTATACAAATACTTTACCCATCGAAATTGGCAAAGATTATAGAAATTGTCTGTGCTTTCGTTCTCAAACACGACGGCAAATTCTACGGTGTGCATCACTGCGATAGTGGCCGGAGTTTAATCTGTCTGAACATTTGCAATAATATTATTATTCAGGGTTCGCAAGCGACGGCCTTCTCAAGGCTTGCTGCGGCACCGGTGGCACCTACAACTTCAACGTCAGCTCCGCGTGCGCCTTACCTGGAGTGGTCGCTTGCAAGGATCCATCGGCCTCGATATCCTGGGATGGGATTCACTACACGGAGGCCATCAACCGGTTCGTTGCCAAGGGGTGGCTCTATGGTCCTTATGCTGATCCCCCAATTTTGACTGCTATCCACCACCATCGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017753