BGIOSGA017754

From RiceWiki
Revision as of 02:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017754| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017754, complete gene.| tag = OsI_205...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017754

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017754, complete gene.

LocusTag

OsI_20552

Ensembl Transcript ID

BGIOSGA017754-TA

Ensembl Protein ID

BGIOSGA017754-PA

Length

2938

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26481965..26484902

Sequence Coding Region

26484662..26484902,26483280..26483428,26482634..26482907,26481965..26482194

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26481965..26484902 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26481965..26484902 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCAAGCTTGTATTCTCCATTGCCTTCATCTTCTGTCTCTCCCATGTGAGCTCTACCTCGCATTTTTTCACCTCGATATTTTCTCTTGGAGACTCCTACATCGACACTGGTAATTTCGTCATCATGGCAACTCCGGTAGCACCCGTGTGGAACGACAAGCCTCCTTACGGCATGACATTCTTTGGTCATCCCACAGGCCGTGTAAGTGATGGAAGAGTCATCATTGATTTCATTGATATCAAGAACTGCTTCAGTAGATCCCTATTTATCGTTGGAGAGTTTGGAGTGAACGACTACAACTTCATGTGGATGGCAGGGAAGGCCAAACACGAGGTCGAATCATACATGCCTCGAGTCGTGAAAAAAATCACCATGGGAGTGGAGAGGCTCATCAACCAAGGCGTGGTTTATGTGGTCGTTCCGGGGAACCCACCAACAGGGTGTGCACCAGCACTTCTCACGCAACGCGTGAGCCCCAACAGGACGGACTACGATGGCCACGGATGCCTGCGTGCCATCAACAGCGTGGCCAAGAGCCACAACACGCTGCTCCGCGCAGCTCTCGGCAGGCTCAGGCGCAAGTACCCCCACGCCAAGATCATCTTCGCCGACTTCTACCAACCCATCATTCGAGTCACCCAAGAACCGCGCCGATTTGGATTCGCAGCCGATGGAGTTCTCAAGGCTTGCTGTGGCAGTGGTGGCGTGTATAACTGGAACGCAAGTGCTACCTGTGCCATGCCTGGAGTGGTCGCTTGCCAGAATCCATCAGCATCAGTGTCCTGGGACGGGATTCACTACACGGAGGCTGTCTACCGATATGTTGCCAAGGGGTGGCTCTATGGTCCCTACGCTGATCCACCAATTTTGAATGCTATTCGCCATTGA</cdnaseq>

Protein Sequence

<aaseq>MELKLVFSIAFIFCLSHVSSTSHFFTSIFSLGDSYIDTGNFVIMATPVAPVWNDKPPYGMTFFGHPTGRVSDGRVIIDFIDIKNCFSRSLFIVGEFGVNDYNFMWMAGKAKHEVESYMPRVVKKITMGVERLINQGVVYVVVPGNPPTGCAPALLTQRVSPNRTDYDGHGCLRAINSVAKSHNTLLRAALGRLRRKYPHAKIIFADFYQPIIRVTQEPRRFGFAADGVLKACCGSGGVYNWNASATCAMPGVVACQNPSASVSWDGIHYTEAVYRYVAKGWLYGPYADPPILNAIRH</aaseq>

Gene Sequence

<dnaseqindica>1..241#1475..1623#1996..2269#2709..2938#ATGGAGCTCAAGCTTGTATTCTCCATTGCCTTCATCTTCTGTCTCTCCCATGTGAGCTCTACCTCGCATTTTTTCACCTCGATATTTTCTCTTGGAGACTCCTACATCGACACTGGTAATTTCGTCATCATGGCAACTCCGGTAGCACCCGTGTGGAACGACAAGCCTCCTTACGGCATGACATTCTTTGGTCATCCCACAGGCCGTGTAAGTGATGGAAGAGTCATCATTGATTTCATTGGTAAGTTGAGTATTTATGCCCTTGTTTCGTGCATGTGGCCCAGACAATTATGTAAAATATATGGAAAAAGAATTGAAGCATGGTTGTTGAATTATGCATCTATGAACAAACATGCAAAATTAAATTCGATATATGTACACGGAAAGAAAATAACTGCAAACACGATCACACACCTTTTGTGGTTTGAATTGTTATTTTTCATCTCCCAATATATAATTAATTTGGAGTAGCATGTTTGTGAATCAATATGTGACATCATAATCTGTATTTTTTTTTCATATGTTTTAATAGCTATTTGGACCACATGCACACGAAGATGTATGTCCTCAGGGGGCTTAAAACGCTTTCTTGAGTAACGTTCAGAGATTCAGGGTGCTACACAAACAATTCTTTCAAGTTAACTCCTAGAAATACTTCCAGCAAATTATACCATGAGAATTCAGAATTCTATTGTGAACTTGCATGCTCGTTAATTATGTGCACTATTCAGTTGCACGTACTAACCAGTTCGTCCAAAATATTACTCCCTTCGTTTTTTAATATATGATGCTGTTGATTTTTTTGATACGTTTGATCAGTCATCTTATTCAATATATATATATATATACCATTTATTTTATTATGACCTGATTTATTGTTAAATATTCTTTAAGTGCATGACTTATATTTTTTGTATGTACACAAAAATTTTAAATAATACGAACGGTCAAATGTTTGTTAAAAAAGTCAACGACACCATATATTACAAAACGAAGGTAGTAATAAGTTGACGAGGACGATGAGAGCAATTTACTTACATATTAGATGGTATAACTCTGCAGTTCTAACTTTTCTTTGTTGTGCTTTCTAGCCGAGGAGTTTGGTCTCCCTTTCCTTCCAGCCTCATTGGCAAATAGCTCAAGTGTCTCCCATGGCGTAAACTTTGCCGTCGGTGGCGCGCCGGCGACTGGCATTGACTACTTTGAGAGGAAAAAAATTGTGGCATTTAAGCTTCTGAACAATTCGCTTGACGTGCAGCTTGGCTGGTTCGAGGAGCTCAAGCCATCGATTTGCAACACAACCAAAGAAGATGCAAATGGCGAGTGGCTGGCATTATCACTTGCTCTGAATCATAGGCACCAATAACCATCATTTGATCTTTATTTTTAGATACCTTCAGAGAAGATATATATAGCCAATCAGTATTTGTATCTACTTCGCAGTGGGGCTTAAATTGATTTCAACAAACTGCAGATATCAAGAACTGCTTCAGTAGATCCCTATTTATCGTTGGAGAGTTTGGAGTGAACGACTACAACTTCATGTGGATGGCAGGGAAGGCCAAACACGAGGTCGAATCATACATGCCTCGAGTCGTGAAAAAAATCACCATGGGAGTGGAGGTACACCATCACTCAGTGGAATGTGATTTGCTCCGGTCCAGCAAAAAGTACCTCGAAGTATTGGTACTCACGGTACTAAATCGTTTGTGATCATTGGATCTAGCTGGGTAGGATAGGTATTGTTAGATCTAACGATCGGAAACGATTTGTTACCGTGGGGTACCGGTACCTCGAGGTATTTTTGGTTGAATTGGAGCAAATCTCCAGTGTAATACCGTGAAGTTTTACTTTGGTTTGAACTTGCTATGTTTTCATGAAAAAAAAGCTTGATCTCTTTGTCACACCATTGCAAAGTTGGTTCTGAATATAACAAAAATGAGCAATATTTGTCAAGCCACATTCTAAATCTGCAGCTTAATTTGCACATCGCAGAGGCTCATCAACCAAGGCGTGGTTTATGTGGTCGTTCCGGGGAACCCACCAACAGGGTGTGCACCAGCACTTCTCACGCAACGCGTGAGCCCCAACAGGACGGACTACGATGGCCACGGATGCCTGCGTGCCATCAACAGCGTGGCCAAGAGCCACAACACGCTGCTCCGCGCAGCTCTCGGCAGGCTCAGGCGCAAGTACCCCCACGCCAAGATCATCTTCGCCGACTTCTACCAACCCATCATTCGAGTCACCCAAGAACCGCGCCGATTTGGTACATACTTTGTTAAGTTCTATGTACATCCGATTGGATGCAGAGGCCGGGGTTTATCCCATTTTCTAAAAGAGAAACATCAACCAGTTTATACAAACGTTTTATAATCAAAACTATGAAAGGATTATTGAATTGTTCATGCTACGATGTGGTCAGTCTTACTAAGGTGGCGTTCTTTTTTCCTGAAGATGAAGATTAAGTTTTTTACGCAAAACGATATGGTATTAACGTATGATTGATTGAGTTTTAATTATTACAAACTTGAAAAATAGATCAATATGATATTTTAGAGCAACTTTTATATATAAAGTTTTCGCACGAAATGCACCGTTTAGCAGTTTGAAAAGCGTAACATGAAAATCTTTATCTTAATCCAACTCTCGTTAGAGAAATGAACGGGACGTAAGGCAGTGGCTTATCTGAAAATTTACATCTGCAGGATTCGCAGCCGATGGAGTTCTCAAGGCTTGCTGTGGCAGTGGTGGCGTGTATAACTGGAACGCAAGTGCTACCTGTGCCATGCCTGGAGTGGTCGCTTGCCAGAATCCATCAGCATCAGTGTCCTGGGACGGGATTCACTACACGGAGGCTGTCTACCGATATGTTGCCAAGGGGTGGCTCTATGGTCCCTACGCTGATCCACCAATTTTGAATGCTATTCGCCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017754