BGIOSGA017756

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Revision as of 02:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017756| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017756, complete gene.| tag = OsI_205...")
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Gene Name

BGIOSGA017756

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017756, complete gene.

LocusTag

OsI_20550

Ensembl Transcript ID

BGIOSGA017756-TA

Ensembl Protein ID

BGIOSGA017756-PA

Length

1854

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26474925..26476778

Sequence Coding Region

26476538..26476778,26476220..26476441,26475964..26476112,26475479..26475752,26474925..26475139

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26474925..26476778 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26474925..26476778 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCAAACTTGTATTTTCTATCACCTTCCTCTACTGTCTCTCTGGTGTGAGCTCAACCTCACACTATTTCACCTCGATGTTTTCCTTTGGAAACTCCTACATCGACACTGGTAACTTCGTTATCATGGCAACTCCGGTTATGCCCGTGTGGATCGACAAGCCTCCTTACGGCATGACATTCTTTGGCCACCCCACGGGTCGTGTCTGCAATGGGAGAGTCATCGTCGATTTCATCGCCGAGGAGTTTGGTCTCCCTTTCCTTCCAGCCTTCATGGCGAACAGCTCAAGCATCTCTCATGGCGTGAACTTCGCCGTCGGCACCGCGCCGGCGATCGACTCTGCATTCTTCAAGAGAAATAACATTGCAGATAAGCTTCTGAACAATTCGCTGGATGTGCAGCTTGGTTGGCTCGAGCATCTCAAGCCGTCGATTTGCAACAGCACAGATGAAGCCAATGGGTTCAAGAACTGTTTCAGCAAATCCCTCTTCATCGTTGGAGAGTTCGGGGTGAATGACTACAACTTCATGTGGATGGCCAAGAAGACCGAAAAAGAGGTCAAATCGTTGGTGCCTCAAGTCGTGGAAAAAATCACCATGGCCGTGGAGAGGCTGATCAACCAAGGCGCGGTTTACGTGGTCGTGCCGGGAAACCCGCCAAGGGGGTGCTCGCCAATTGTCCTCACGCTCTTCATGAGCCCGAACACGACAGACTACGATGGCCTCGGCTGCCTGCGTGCTGTCAACCGCATGTCCAAGCGCCACAACGCAATGCTCCGTGCGGCTCTCGACGGGCTCAGGGGCAAGTACCCTCATGCCAAGATCATCTTCGCCGACTTCTACCGACCCATCATCCAAGTTCTCCAAGACCCCGTCCGTTTTGGATTCGCCGCCGGTGGCATCCTCAGGGCTTGCTGCGGCGGCGGCGGGCCGTACAACTGGAACGGCAGCGCCATCTGCGGCATGGCGGGCGCGGTCGCGCGCGAGGACCCGTTGGCGTCCGTGCACTGGGACGGTGGTCACTACACGGAGGCCATCTACCGCTACATCGCCAAGGGGTGGCTCTCTACGGCCCTTACGCTGATCCGCCAATTTTGA</cdnaseq>

Protein Sequence

<aaseq>MELKLVFSITFLYCLSGVSSTSHYFTSMFSFGNSYIDTGNFVIMATPVMPVWIDKPPYGMTFFGHPTGRVCNGRVIVDFIAEEFGLPFLPAFMANSSSISHGVNFAVGTAPAIDSAFFKRNNIADKLLNNSLDVQLGWLEHLKPSICNSTDEANGFKNCFSKSLFIVGEFGVNDYNFMWMAKKTEKEVKSLVPQVVEKITMAVERLINQGAVYVVVPGNPPRGCSPIVLTLFMSPNTTDYDGLGCLRAVNRMSKRHNAMLRAALDGLRGKYPHAKIIFADFYRPIIQVLQDPVRFGFAAGGILRACCGGGGPYNWNGSAICGMAGAVAREDPLASVHWDGGHYTEAIYRYIAKGWLSTALTLIRQF</aaseq>

Gene Sequence

<dnaseqindica>1..241#338..559#667..815#1027..1300#1640..1854#ATGGAGCTCAAACTTGTATTTTCTATCACCTTCCTCTACTGTCTCTCTGGTGTGAGCTCAACCTCACACTATTTCACCTCGATGTTTTCCTTTGGAAACTCCTACATCGACACTGGTAACTTCGTTATCATGGCAACTCCGGTTATGCCCGTGTGGATCGACAAGCCTCCTTACGGCATGACATTCTTTGGCCACCCCACGGGTCGTGTCTGCAATGGGAGAGTCATCGTCGATTTCATCGGTAAGTTCAGCAATATTTCGATTCGGAGAACAATACAAATAGTTCAATTTCCTGAAAATTACAATGACACTGGAAGAATAATCGGTTTGTTTGTAGCCGAGGAGTTTGGTCTCCCTTTCCTTCCAGCCTTCATGGCGAACAGCTCAAGCATCTCTCATGGCGTGAACTTCGCCGTCGGCACCGCGCCGGCGATCGACTCTGCATTCTTCAAGAGAAATAACATTGCAGATAAGCTTCTGAACAATTCGCTGGATGTGCAGCTTGGTTGGCTCGAGCATCTCAAGCCGTCGATTTGCAACAGCACAGATGAAGCCAATGGTGCGTCGGCTGGAATTGGTAACAATTCTCTGAATCGAAGACAGCATCGTACTGCACTCTTCTCCACGAGCCTAAATTGACTTCAAGAGACCGATTGGTCTCTACAGGGTTCAAGAACTGTTTCAGCAAATCCCTCTTCATCGTTGGAGAGTTCGGGGTGAATGACTACAACTTCATGTGGATGGCCAAGAAGACCGAAAAAGAGGTCAAATCGTTGGTGCCTCAAGTCGTGGAAAAAATCACCATGGCCGTGGAGGTAAACTTCGATCTGCATTAGTATCAATTTGCAGTTTTACTTTGTTACTATATTCGCTCCAAAATATAAGGGATTTTGGTTCCTATCCTAGTACTATGAAATCTGAATAGACGTAGCACTATATACATATATTTTAAAACGAAGAGAGTACTATATACATATTAATTCACTTGTATTCTTGTTTACATTGCTTCAACTTTGGGTATTGCAGAGGCTGATCAACCAAGGCGCGGTTTACGTGGTCGTGCCGGGAAACCCGCCAAGGGGGTGCTCGCCAATTGTCCTCACGCTCTTCATGAGCCCGAACACGACAGACTACGATGGCCTCGGCTGCCTGCGTGCTGTCAACCGCATGTCCAAGCGCCACAACGCAATGCTCCGTGCGGCTCTCGACGGGCTCAGGGGCAAGTACCCTCATGCCAAGATCATCTTCGCCGACTTCTACCGACCCATCATCCAAGTTCTCCAAGACCCCGTCCGTTTTGGTATGTATATTTTCTAGTCTAAAAAACGAGTCTCCTCTGACGTACTACCCTTTGATATACGTCACTAACATGTGAGTTTATTGACTGTGGGATCCACATGTCAGCCACTCAAAATTAGAGGGCAGTATATTAGACGATCCGTTTGCCTAGCTGCTTACTAATCAAGTACAGTGTCCCGTTGCAAGATTTGGTTCGTTCAGTTTTCCATAAGGAAAAAAGAAAGCAATGACCAGTACTACGAAATCTGAATAGACGTAATATTAAGATGTGTCACATCCAGTGCATGGTATATCCATCTACGGTATATGGTTAAGTGATTTGTACATTTGCGATGTGCAGGATTCGCCGCCGGTGGCATCCTCAGGGCTTGCTGCGGCGGCGGCGGGCCGTACAACTGGAACGGCAGCGCCATCTGCGGCATGGCGGGCGCGGTCGCGCGCGAGGACCCGTTGGCGTCCGTGCACTGGGACGGTGGTCACTACACGGAGGCCATCTACCGCTACATCGCCAAGGGGTGGCTCTCTACGGCCCTTACGCTGATCCGCCAATTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017756