BGIOSGA017769

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Revision as of 02:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017769| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017769, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA017769

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017769, complete gene.

LocusTag

OSJNBB0048K05.3

Ensembl Transcript ID

BGIOSGA017769-TA

Ensembl Protein ID

BGIOSGA017769-PA

Length

4196

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26239612..26243807

Sequence Coding Region

26243631..26243807,26242273..26243055,26241887..26242183,26241182..26241379,26240739..26240873
,26240538..26240654,26240254..26240412,26239612..26239671

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26239612..26243807 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26239612..26243807 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGGCGGTGGGGGGAGCCGAGTTCCACGGGTTCCGTGGGGGTGGCGGCGGCGCGGCGCAGCTGCAGAGGTCGCGGATGCTCGGAAGGCCGCTCCGTGTGGCGACCCCTCACGCGGCGGCCCCCGCTGGCGGCGGCGGGTCGTCGTCGGCCAGCATACGCGCCGTCTCCGCGCCACTCAAGAAGGATGCATCTGAAGTTAAGAGGAGCAAGGTTGAGATCATCAAGGAGAAGAGCAATTTTCTTCGGTACCCTTTGAATGAGGAACTGGTCTCAGAGGCTCCCAATATTAATGACAGCGCTGTCCAGCTTATTAAATTTCATGGAAGCTATCAACAGACGGACCGTGATGTTCGTGGGCAGAAGAATTACTCGTTTATGCTCCGAACAAAGAATCCTTGTGGAAAAGTTCCAAACCAGCTTTACTTGGCTATGGATACGCTAGCTGATGAATTTGGTATTGGAACACTCCGATTGACGACCAGACAAACATTTCAGCTGCATGGCGTTCTTAAGAAGAACCTGAAGACTGTCATCAGCACTGTTATAAAGAATATGGGTTCATCATTAGGTGCCTGTGGAGATCTCAACAGAAATGTACTTGCACCTGCAGCACCTTATGTCAGGAAGGATATTCTTTTTGCTCAAGAAACAGCAGAGAATATCGCAGCTCTTCTTACACCACAATCTGGGGCTTATTATGACCTGTGGGTGGATGGAGAAAAGATAATGTCAGCCGAAGAACCTCCTGAGGTCACGAAAGCTCGCAATGACAACACATATGGAACAAATTTCCCCGATTCCCCTGAACCAATATATGGCACACAGTATCTGCCAAGAAAGTTCAAGATTGCTGTCACTGTCGCTGGAGATAACTCTGTTGATATTCTGACCAATGACATCGGTGTTGTTGTTGTTTCAGATAGTGCAGGAGAGCCTGTTGGCTTCAACATTTATGTTGGTGGTGGCATGGGTAGGACACACCGAGTGGAGACCACATTCCCTCGATTGGCTGATCCACTGGGTTATGTTCCTAAGGAAGATATATTGTATGCTATAAAAGCAATAGTCGTCACACAGAGGGAAAATGGGAGAAGGGATGACCGCCGATATAGCAGGATGAAGTATCTGATTGATAACTGGGGAATTGAGAAGTTTCGGGCTGAAGTCGAAAAATACTATGGAAAGAAGTTTGAAGATTCTCGTCCTTTGCCCGAATGGCAGTTCAACAGCTACCTAGGATGGCAGGAACAGGGTGATGGAAAATTATTCTACGGAGTGCATGTTGATAATGGTCGTGTCGCAGGGCAAGCAAAGAAAACTCTACGAGAGATTATTGAGAAGTACAATTTGGAAGTTAGCATTACTCCAAACCAGAATCTTATCTTATGTGGGATTGATCAAGCATGGAAAGATCCCATCACAGCAGCTCTTGCTCAATCTGGCCTGCTGGAACCAAAGGATGTTGATCCCCTGAATATTACTTCCATGGCATGTCCTGCCTTACCACTGTGCCCTCTAGCACAAACAGAAGCTGAACGAGGGATTCTGCCGATTCTTAAACGAATTAGAGCAGTTTTTGATAAGGTTGGCATCAAGGACCATGAGTCGGTAGTGGTGAGGATAACAGGCTGCCCTAATGGATGCGCTAGACCATATATGGCAGAGGTTGGCTTTGTTGGTGATGGCCCAAACAGTTACCAGATATGGCTTGGAGGAACACCAAACCAGAGTACCCTAGCTGAAACCTTTATGAATAAAGTGAAGCTTCAAGATATTGAGAAGGTTTTGGAACCATTGTTTTCCTATTGGAACAGCACACGTCAGGAAGGTGAATCTTTTGGTAGCTTCACACGCCGGACGGGATTTGACAAATTGAAAGAGGTAGTGAACAAGTGGGCAGAGTCAGCATCAGCTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MSAAVGGAEFHGFRGGGGGAAQLQRSRMLGRPLRVATPHAAAPAGGGGSSSASIRAVSAPLKKDASEVKRSKVEIIKEKSNFLRYPLNEELVSEAPNINDSAVQLIKFHGSYQQTDRDVRGQKNYSFMLRTKNPCGKVPNQLYLAMDTLADEFGIGTLRLTTRQTFQLHGVLKKNLKTVISTVIKNMGSSLGACGDLNRNVLAPAAPYVRKDILFAQETAENIAALLTPQSGAYYDLWVDGEKIMSAEEPPEVTKARNDNTYGTNFPDSPEPIYGTQYLPRKFKIAVTVAGDNSVDILTNDIGVVVVSDSAGEPVGFNIYVGGGMGRTHRVETTFPRLADPLGYVPKEDILYAIKAIVVTQRENGRRDDRRYSRMKYLIDNWGIEKFRAEVEKYYGKKFEDSRPLPEWQFNSYLGWQEQGDGKLFYGVHVDNGRVAGQAKKTLREIIEKYNLEVSITPNQNLILCGIDQAWKDPITAALAQSGLLEPKDVDPLNITSMACPALPLCPLAQTEAERGILPILKRIRAVFDKVGIKDHESVVVRITGCPNGCARPYMAEVGFVGDGPNSYQIWLGGTPNQSTLAETFMNKVKLQDIEKVLEPLFSYWNSTRQEGESFGSFTRRTGFDKLKEVVNKWAESASAA</aaseq>

Gene Sequence

<dnaseqindica>1..177#753..1535#1625..1921#2429..2626#2935..3069#3154..3270#3396..3554#4137..4196#ATGTCGGCGGCGGTGGGGGGAGCCGAGTTCCACGGGTTCCGTGGGGGTGGCGGCGGCGCGGCGCAGCTGCAGAGGTCGCGGATGCTCGGAAGGCCGCTCCGTGTGGCGACCCCTCACGCGGCGGCCCCCGCTGGCGGCGGCGGGTCGTCGTCGGCCAGCATACGCGCCGTCTCCGCGGTGAGTTTCCAGTGCTGTTTGTTTTCTCTCGTGATTTCTCGTCTCGTGCGAGAGAGAGATTTCGGGTTTTACCGTCTGGAGAAGGATTTTTTTTTATCTCCAGTGGGGGGTTTAACTGATCATATACAATTGATCGAAGTGGTCCCCTATTGAAAATGGTATGGTGTGTGATGGTTTTTGAGCACCTGGATGATTCATTTTCCGAATTCACCTTACCTGTTGATGGATTTGTCCAGGTGGTATTGGATCAAATGTCTGCAGTTGATTCTCTTGTGCAGCAACTGTAATATGCTAGTAATCAGTTAAGAGATGAAGAGAGAGCTTTTGTTCAAATCAGTCTCCCTTGTAGTGTCGATACCTTAAAAAAAATGGTCTGTCATAGGTTGCAAAGATTCCATTTGTAGACGTTAGTAATAAACTTATAGCAATTGCTTTGTCTTATTCATTTACTTCTTCAATGTTGGTTACATTATATTGATCTCCACTACCACTCAATACAAAATACTGTGCAACGATATACTAGTGGAATACTCGTGGTTGCTTCAGTTCTGAACCCTTGCATTGTGTGCCTGCAGCCACTCAAGAAGGATGCATCTGAAGTTAAGAGGAGCAAGGTTGAGATCATCAAGGAGAAGAGCAATTTTCTTCGGTACCCTTTGAATGAGGAACTGGTCTCAGAGGCTCCCAATATTAATGACAGCGCTGTCCAGCTTATTAAATTTCATGGAAGCTATCAACAGACGGACCGTGATGTTCGTGGGCAGAAGAATTACTCGTTTATGCTCCGAACAAAGAATCCTTGTGGAAAAGTTCCAAACCAGCTTTACTTGGCTATGGATACGCTAGCTGATGAATTTGGTATTGGAACACTCCGATTGACGACCAGACAAACATTTCAGCTGCATGGCGTTCTTAAGAAGAACCTGAAGACTGTCATCAGCACTGTTATAAAGAATATGGGTTCATCATTAGGTGCCTGTGGAGATCTCAACAGAAATGTACTTGCACCTGCAGCACCTTATGTCAGGAAGGATATTCTTTTTGCTCAAGAAACAGCAGAGAATATCGCAGCTCTTCTTACACCACAATCTGGGGCTTATTATGACCTGTGGGTGGATGGAGAAAAGATAATGTCAGCCGAAGAACCTCCTGAGGTCACGAAAGCTCGCAATGACAACACATATGGAACAAATTTCCCCGATTCCCCTGAACCAATATATGGCACACAGTATCTGCCAAGAAAGTTCAAGATTGCTGTCACTGTCGCTGGAGATAACTCTGTTGATATTCTGACCAATGACATCGGTGTTGTTGTTGTTTCAGATAGTGCAGGAGAGCCTGTTGGCTTCAACATTTATGTAATGTCTTAACAAATGCCCTATTTATATTTTTAGCAGCTTTCTTAATCGTAGATTTCTTATTTAGTTATCTCTGACCTCCTTTTCAGGTTGGTGGTGGCATGGGTAGGACACACCGAGTGGAGACCACATTCCCTCGATTGGCTGATCCACTGGGTTATGTTCCTAAGGAAGATATATTGTATGCTATAAAAGCAATAGTCGTCACACAGAGGGAAAATGGGAGAAGGGATGACCGCCGATATAGCAGGATGAAGTATCTGATTGATAACTGGGGAATTGAGAAGTTTCGGGCTGAAGTCGAAAAATACTATGGAAAGAAGTTTGAAGATTCTCGTCCTTTGCCCGAATGGCAGTTCAACAGCTACCTAGGATGGCAGGAACAGGTAAAGATACTGGCTCTGATATCTTTAAAAGGCAGTCTTGTTTAGGATGGATGCCTCCATACTTGAGCAATTATTTTCTTCATTTATAAACTAATTTTAGATGTGTTTGCTCCTCTGGGTACAACTTCCACGTCGCATACTCATATACTTCTATAGTCTGTCGCACTCAGGGTTTCCCAAACCACCGGGGTCCGGGGTTACCACGCCCCGGCGGTAAGCACGGTTACCGCGCGGTAACCGTGGCAAACCGTTCAAAACCGTATAAAATTTATCAAAATTTCAAATTATATTTTAAATTTATTTGAATTTAAGAAGGTTACCGCGGTTTTCCTTTTACCGTACCCCCGCAGTAATCACGTGGTTACTGGCGGTTTGGGAAACTCTGGTCACACTCCGGTCAGCATAAGACCATTTTGATCCATCTGCTGTTGTGTGGACTTATTCATTAACAATTAGTTATTTCCTGAGTACCAAGTTACATTATTTTTCATTATTTGCCTATTACAGGGTGATGGAAAATTATTCTACGGAGTGCATGTTGATAATGGTCGTGTCGCAGGGCAAGCAAAGAAAACTCTACGAGAGATTATTGAGAAGTACAATTTGGAAGTTAGCATTACTCCAAACCAGAATCTTATCTTATGTGGGATTGATCAAGCATGGAAAGATCCCATCACAGCAGCTCTTGCTCAATCTGGCCTGCTGGTAAGATTTCCTTCGCTTATATCATATCCCTGGTCTGTAACAATGAAATATGTTGCCCTCCATGAGTTCCCTGTAATATTAAATCCTTGTAAGCTTATTTGCTTTTGAAGTTGTGCAACATTCTATTCTTGTGTCTTTTTTATTGTTACTAATTCCGGTATATTGAGGTTTCTATCGTGTTGAAAATTTCAAATAGCACTAAAAGCAGACTGCGTCTCTTCTTCGATTGCCCCCCAACAGTTTGATTTCTCAATAAGGCGGTATGCTTGTAGGAATATTTTAATCAAGTTAGCCTTTTATGTATGTAGGAACCAAAGGATGTTGATCCCCTGAATATTACTTCCATGGCATGTCCTGCCTTACCACTGTGCCCTCTAGCACAAACAGAAGCTGAACGAGGGATTCTGCCGATTCTTAAACGAATTAGAGCAGTTTTTGATAAGGTATAGTCTGTCGTCTTGTCACAAAATTTGAACATTGTGTGCATCGGATCCATGTCAGTTGACATAATGTTCTCTCATTAATAGGTTGGCATCAAGGACCATGAGTCGGTAGTGGTGAGGATAACAGGCTGCCCTAATGGATGCGCTAGACCATATATGGCAGAGGTTGGCTTTGTTGGTGATGGCCCAAACAGTTACCAGGTATAGGAGATATTGAAAATATTTTCCTTTAGGCTATGTTTGTTTGGCTTCATTTTCTTTTAGTTTGTTTTTCGTCATTGCGTTTTCTTCTTTTTATCTTCACTAAACATTTCTTTTGTGGCCAGATATGGCTTGGAGGAACACCAAACCAGAGTACCCTAGCTGAAACCTTTATGAATAAAGTGAAGCTTCAAGATATTGAGAAGGTTTTGGAACCATTGTTTTCCTATTGGAACAGCACACGTCAGGAAGGTGAATCTTTTGGTAGCTTCACACGCCGGACGGTGAGTAATCTTTCTGCAAATACTCGTGAATGATTTTCGAGATGAATCATTTGGAACCTCACATGTAGATTGGCCACTCAATGGTTCCCAAAAGATATCTTATTCTTGTCCATTGTACGGTCTTCCTGTGCTCGTAGTTACTAATTTAATAGAAAAACTCCAAAGAACAGTGATTTGTTTCCTTCTGAGAGTATTAACCACACCAAGTAGGGGCTAAACGAACATGGACACTGAATCAGAATCTGCTGCCTCATTGCACCTGAAAATGCCAAACCAGATCAGATTTTTGATGGATGTTGTTGGCCATACAATGCATAGCCTAGTCATAGTAAATTGTTAAGCCAAGCAGAAAACGTTCTGTTAGCAAAGGAGCCATTTGCCAGTGTGGGATTCCTTAGCATATTTTTATTATCAAACTGAGTCACATTGCCATAATTGTTCATATATGTTAATTGATCTACTAGGGGTAGGGGATAAGGCTGAGATGAACTTTTCCGCTAAAGGTGGAATTGCAGTAGCTGAATATAGTATAGATGTTGCTTTTCATCAGCATTATCTCACCTATCTTTTGCATAAAACCAGGGATTTGACAAATTGAAAGAGGTAGTGAACAAGTGGGCAGAGTCAGCATCAGCTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017769