BGIOSGA017770

From RiceWiki
Revision as of 02:24, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017770| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017770, complete gene.| tag = OsJ_191...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017770

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017770, complete gene.

LocusTag

OsJ_19111

Ensembl Transcript ID

BGIOSGA017770-TA

Ensembl Protein ID

BGIOSGA017770-PA

Length

5065

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26224433..26229497

Sequence Coding Region

26229441..26229497,26228490..26228588,26228149..26228211,26227413..26227446,26226765..26226887
,26226416..26226478,26226230..26226323,26226088..26226130,26225902..26225969
,26225205..26225253,26224903..26224968,26224433..26224519

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26224433..26229497 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26224433..26229497 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGGAAGCACGGCCGCAACGGCTTCGAGGACGACGACGTCAATCCCTTCGCGGGAGGAAGTGTTCCTCCTGCCAACAATTCTCGACTCCCACCTCTCTCCCATGAGCCAGCTGATTTTTACAATGTGGACATTCCTCTTGACTCGTCTAAGGATTTGAAGAAAAAGGAGAAAGAACTCCAGGCAATGGAAGCTGAACTAAACAAAAGAGAAAGGGAACTGAAAAGGAAGGAAGAGGCTGCAGCCCAAGCTGGCATTGTCATTGAAGATAAAAATTGGCCACCCTTTTTCCCTCTCATTCACCATAATATTTCAAATGAGATACCTATTCATCTACAAAGAATGCAGTACCTTGCATTTTCATCGTTTTTGGGATTGGCAGCCTGCCTATTTTGGAATATCATAGCAACCACAACCGCATGGGTAAAAGGGGAAGGTGTTATTATCTGGTTGCTTGCTATTATCTACTTCATATCTGGTGTACCTGGTGCTTATGTGTTATGGTACCGCCCTCTTTATAATGCAATGAGAACTGAGAGGTTTGAAGTTGGGTGGTTTTTTCTGTTTTACCTGATTCATATAATCTTCTGTGTGTGGGCAGCTGTGGCTCCTCCTTTTCCTTTCAAAGGAAAATCTTTGGCTGGGATTTTGCCTGCCATTGATGTCATAGGCAGGAGTGCTATAGTGGGGATATTTTACTTTGTCGGGTTTGGATTATTCTGCCTTGAGTCACTGCTGAGCATTGGTGTCATTCAGCAAGTATACATGTACTTCCGTGGAAGTGGAAAAGCCGCAGAGATGAAACGTGAGGCGGCACGTGGTGCTCTGAGCTCCGCATTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAGKHGRNGFEDDDVNPFAGGSVPPANNSRLPPLSHEPADFYNVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTERFEVGWFFLFYLIHIIFCVWAAVAPPFPFKGKSLAGILPAIDVIGRSAIVGIFYFVGFGLFCLESLLSIGVIQQVYMYFRGSGKAAEMKREAARGALSSAF</aaseq>

Gene Sequence

<dnaseqindica>1..57#910..1008#1287..1349#2052..2085#2611..2733#3020..3082#3175..3268#3368..3410#3529..3596#4245..4293#4530..4595#4979..5065#ATGGCGGGGAAGCACGGCCGCAACGGCTTCGAGGACGACGACGTCAATCCCTTCGCGGTGAGTGCTCGCTCCCCCTCGTTCCACCCCCGCGCTAGTATATTCGAGAAGGTTCGCTGTTCGCGTAGATCTCGGGGTGGGTTCTCCTGATCTGATCTACGTAGGAGGTGGCCGCATTTGGGATCCGTCGTTGCTTGGGTTCCGGCGCGGCTGGATCTGGCGCGTGGGAGGAGGGTGCGATGGCGAGATGCGTTTTTTTCTTTTGGTGGTTGGAGTAGGCGAGATTACGCTGTTTAGGCCTGTGTAGGTTAATTGCTTGCGGAGTGATTGTTCAACTATGGATCTGGGTGTGGTGGGTGAATTGGAGAATGTATGTGGTAGTAGTACAGTTCTTTGCTGGAACTCGGAATTCGGATTTGTAGCATGCTAGAGCAATGTGGTGGTACCTTTGGTGTGCTGCAACCTGCAAGTACAACCTGGAACTAGTTTGGTTTACACAGAATTGTTTGCGCTCGTTGCCTCGGTACCATGCCTTGTTTAGTCTATTAGTGTAATTACGAAATTATTCAGGAAGGATCTCCAATTTTGATTTCCATTAACTGCTATTTTGAAAATGCAATGCGATGACAAGTGCTCTACCTTCTGTATCGTTTTAAGACTAAACTTGTAAGACACTATTTTCGCAGGCATGTGTCATCAAAACTTTTGATGTTTCTGCATTAGTAGTTCTTTGATATACTATTATATGTTGGCACTTCTTATTTACGTGGAAAATTGTACCTCACTTCAGGTCAGTTGTAGTTGTAACTCATAAAAATCGTGTTGTAACTGGTTGCACACAAGCCTATAATGTTCATGTTATTTTCTACTACTTTGTGATTTATTTGCCTTGCAATTCCTCCTATATTGCAGGGAGGAAGTGTTCCTCCTGCCAACAATTCTCGACTCCCACCTCTCTCCCATGAGCCAGCTGATTTTTACAATGTGGACATTCCTCTTGACTCGTCTAAGGTACATGCAATTCCATTTCATGTTCATTATCGTATGGACTTCTAGTTTTGAGAATGTTATATCCACTAAAAACTAGTGTTATTTGAGCTTCTTGCTGTCAATACATGATGCACACCATAAATTGTTTTGCCATGGTCAGTATTTGTTGTGTTATAATGTAGAGTTAGAAGAATATTATGTTATTCCTTTATTTATAACATCTGCCAAGTTAATTTCAGGCATTCTTGGTTTGTTTTTGGATGATTCCTTATGTCTTGCATCCATTTCTTTGAATTTAGGATTTGAAGAAAAAGGAGAAAGAACTCCAGGCAATGGAAGCTGAACTAAACAAAAGAGAAAGGGTGTGTGCCTTACAATTCCTGATTTAATTTCTCCTGTGCTCTTTGCTGGTTACAAATCCTTCTATTTTATGAACAAGAACTCTACAGTCCTGATAATTTCCTAGATGCTATTTGGTAATTACCAGATGATTTGACCATAGCAATGCGGTAAATTTTTAGCCGTATACTGGTCGGTACTCGGTAAATTTTTATCAGATGTTTTGTGCCTCAGCACGCCCAAAACCAACTAGAATTGTAGAGCATGATTAGCTATTGGACTTACTGAATATATAGCATATGTTGATCGAAATTACTGGAGAAACTACCTGTTGGTGATGCCTTCATGTCTTAAAGCCTATGAGCAAAAGCAGAACTTGCTTGCATTCTTATTGGTCACATAACATATCTGCTATTACATAAATGATGACTTTTACATCTTTCAACTTGCTAGCAAGATAGGAAACTTATTTCAATTTTTTAGTAAGGTTGCTTAGTTAAGGTGTGGCATATGAACAAATCTTTTTTTGCAGTGAATAGTTCTCTTGAAAAACCATGTTTCTTGAGCCTGGGTAATTACTATGTTGAACTTCGTGTGAGATGTTAGAGTGTTTTTCTAAATCCACGAATGGGATTTGTTTGTTAATGTCGTGTTCCGTGTTTCATATCATGCATTGTTCTTTATCTAAATGCTGATCTGATTCCTTCTTTGTCTCCCTGCCATAGGAACTGAAAAGGAAGGAAGAGGCTGCAGCCCAAGGTACAGTTTGCATTCTTTCTTTTTGCTGACCCGTTTTAGCTGTTTCCTTAGCATAAAGATTTGAATATGCAAGCAATGTTTGGTAGAGGCGTGAAAGTTTTGCTTGCCAACTCAAGTTGAGTAAGTTGTGTTATTGCGGAATTTTTCCACAGAGAAATCAACATAAATATAATCAATTTGGTTTTTATAGGACGGGATATCAGGGTTATCAATTATCAGTGTATGGTATAGCCGTATTGGTGATATTTGACTTCGATGAGTGGATTCCTTTTCCCAGATTAATAATTTATAGCTGCATTCTTTTATGACATTGGAGTTAATTTGCATGGATCTAGTTTGGGCTACTTTCAAAAGGAAAAAAAAGGAGAGAGATAGAGAGAAGCTGCAGTTTGGGTTCGTTCTGGGATTTGATTTGATACGTCTTTTGCATTGTCTGCTAGCATTTGTTTCTACTGTTGTAGCTAAGATGCCCTTTACAAAGTTGCTTACTATTTATTTACCTAACTTCACCCTTCTCTTTTGCAGCTGGCATTGTCATTGAAGATAAAAATTGGCCACCCTTTTTCCCTCTCATTCACCATAATATTTCAAATGAGATACCTATTCATCTACAAAGAATGCAGTACCTTGCATTTTCATCGTTTTTGGGTAAGCTCTAGTGGTGTTCAATAGTATTGTGTTCTTTTTGTTGAGCATGTTACATTCATTATTTCCATCCATATTATATGCTTGTAATGTAATTACCAACAGAACAAAAAAATAATAAGTATAGATTCAAATTTATTGACTTAGCCAAAGGATTTATCATTCTCATTATTGAGTGAACTGATAAGTTCTTCATGAAAGCATCTTGTTATACAGAGGCTCATTCATGGATTTTGTATAGAATTGCTAAATTGGTAGTTCTTTTGTCCATACCTGTGATCTCATGCAGGATTGGCAGCCTGCCTATTTTGGAATATCATAGCAACCACAACCGCATGGGTAAAAGGGGAAGGTAAAGCTAAAGTGTACCCAACCGTCTACATTGTATGAAATGTGCCATGAATGTTGACACTCAAAACTAATAGGTGTTCTGTGCTTTGACAGGTGTTATTATCTGGTTGCTTGCTATTATCTACTTCATATCTGGTGTACCTGGTGCTTATGTGTTATGGTACCGCCCTCTTTATAATGCAATGAGGTTGGATATATTAAATGAGCATTGTTGGCTACACAACTTTTTCACCTTTTAAAATATCTAATACGCTAGTGTCTTGTTCTTTTTTCAATGCCGTTACAGAACTGAGAGGTTTGAAGTTGGGTGGTTTTTTCTGTTTTACCTGGTAAAATAATCTAAACTAAAGGTTTGTCAGTCATATCTTAGCATTAAATTAGATGAGCCAAGCATGAACAAATTCATCTGTACTTCATAGCTAACTAACAATCTTTGTCCATTTCCAGATTCATATAATCTTCTGTGTGTGGGCAGCTGTGGCTCCTCCTTTTCCTTTCAAAGGAAAATCTTTGGCGTGAGTCTCCCCTATTCTTTTTCTTGTGTGCATTCTGCCTGAGATGTCATGTAGGCCGTAAAGTTGTAAACGACACTAGATGTGAGGAACTACAAAATTTCCTTATTTATTTATGTTTCTTCCCCAAAAAAAATATCCAAAAAAATAAATCGCAGTTCCATTGAATGATTCGTCAGAAGCTGGTAAATATACTTGTCAAGCCTCATGTTCCTGAACCAGCTATTGCCTTCTCCATGAGCTGTGAATACATCTCTGCAATCGAACCATTGCAGAAACAATAGGATGTTTCTAAGGCACATAACCTGTGGTCCTAGTACTGGATCTATAAGGAAAAAGTGTAAACTTGGCTACATGCAGACAAATTCTACGACGATCATATTTGTTGTTGAATGTGTTGAGAAGTTCGCTCACATTGGTTTACAAGAACCACAATCCAATCAGTCTGAACTTCTGTTGCTTAGAGTCTGATAAATCTTGGTACCACAACCTTCCAAATCTTGGTTGTCTTCCTCTGAATTGCTCAGTAAAAAATAGTCCTGCTTCATACTGTCCATGATATATATTCCGGTTTTAGATCATTCTATTATAGTATATTTCTGTTTTTTTTAAAAAAATATCTGACTGAATATCTGCTGTTCTTGTTACTAGTGGGATTTTGCCTGCCATTGATGTCATAGGCAGGAGTGCTATAGTGGGGGTAAGTATCTATTGCAACGTTGATCCTTGTAATAGGTCTTTCAAATTTGTTGTCAGGACTAAATTTTCTTGTGAAGTTGCATCTTCATTTTACTGGGTTCATGTGCTTTTTGCATGGTGTTGATAGCTTGCCATATACCACCACATGCATCTTTCTGGCTGGCTTAGTCAGCCTATGAAAGCCATATACTGGATTCACATATCTTATAATACCTCCTAACTATTTTCACTTGGCAGATATTTTACTTTGTCGGGTTTGGATTATTCTGCCTTGAGTCACTGCTGAGCATTGGTGTCATTCAGGTGGGTGCTATCCCCTCGTGTTATTTGTATGGTTGAACCATATATCAGTTTTATTTGGAAATCTTGGTCTGCCTATGGTTTATTACACATTCTATCTCCTCATTTGTAGTTACTAGTTAGAACATAATCTCTAAAAGCCAAATGATCTGATTGCTTGACTTAGTTAGCATGTAATATCTAAACTAAAATCCAAAGGAATTCCTCTGATGGCAAGTTTTTGGGAAATGAGTTAAAAAATTTGTCCTCGGTTCCTTACTGGTGAATATCATCATGTTCACGTTAGAGGTTCAACATAGCATGGACATTCTTACATACATTTCAATCGTTTCTTAGTCAAATTTTCATTTTAGATCATGACCATTGATTGCTCACTCAACATGCAGCAAGTATACATGTACTTCCGTGGAAGTGGAAAAGCCGCAGAGATGAAACGTGAGGCGGCACGTGGTGCTCTGAGCTCCGCATTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017770