BGIOSGA017794

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Revision as of 02:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017794| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017794, complete gene.| tag = P0010D0...")
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Gene Name

BGIOSGA017794

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017794, complete gene.

LocusTag

P0010D04.3

Ensembl Transcript ID

BGIOSGA017794-TA

Ensembl Protein ID

BGIOSGA017794-PA

Length

5062

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25932309..25937370

Sequence Coding Region

25937305..25937370,25937140..25937186,25936848..25937028,25936719..25936769,25936470..25936544
,25936371..25936412,25935475..25935591,25935266..25935397,25935059..25935162
,25934326..25934411,25934132..25934226,25933360..25934053,25933013..25933214
,25932638..25932726,25932309..25932538

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25932309..25937370 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25932309..25937370 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCGCGAGGTTGCCGCAGCCGCGCGCGGCTTCTCGGCCATGGCGCGAATCGTCGGCCCGGACCCCAAGGCCGTCAAGATGCGGCGGCACGCCTTCCACCTCCACCAGTCGGGGTCAACCACGCTCTCCGCGTCGGCGCTACTCCTGCCGCCGGGATCACTGGCGGAGCCGCCGCCACTTCTCGATCGCATCTGCGCGGCTCACGGCCACGCAGGGGGCGTCGCGCTTACCTCCGCGTCGCTCGTCGAGCCGTTCTTGGTCGAGGAGCAGCGCAATAGCCCCAGCCAGGAATTGCAACCGAGGTTGGTACCAGAGGCTCATCTTGATGTGCTCGTTGAGCATGAGGAATCAAGGAACATTGGAGGCGGGAAGACTGGAGCTCCACGGTGGCTTTCAGCTCGATTACTTGCCATACTTTACTTCTCTCAGCAAGATTCTACTGTTGGACTGTTAGTAGTTGATGTCCAAGCATCTGCTGATTCTGTATTATCCTTACTGCAACATGAAGGTTCATTGATTCGAAGTTCATCGTGGGATGTCTGCTGGTCATTGGCTGATGTCAACCAGAAGCAGGTTGATAATGATGCCAGATATTCCCTTGAGTGTAACAGGAAAAATGCTTATGCTGAGTCAACAGAGCCACCAATGTTGGCCAAGTCTGCCACAAGAATTGCTATTCTAGGAGTTTCAAACTTAAATTCAAGTAATACAAGATGTATCAATGTTTCACTGATGCAACAACGAGGGGACTCCTTGCTGATAATGGGATCTCCATTTGGCATATTATCACCTGTCCATTTCTTCAATAGTATATCAGTTGGTGTTGTTGCAAATTGCCTCCCTCCAGGCACTGCCAGGAGCTCATTGCTGATGGCTGATGTCCACTGTCTTCCTGGTATGGAAGGTGCTCCAGTGTTTGACAAAAACTCTTGCCTTGTGGGGATGCTGATGAAGCCATTAAGACAGAGAGGCAGCAGCACAGAAGTTCAGCTTGTAATTACCTGGGATGCAATCTGCAATGCATGGAACAGTGACAAGCTGGAAAGAATTGGCCATCCCCCAAGTGAATTAGTTGATGACAAAAGTTCAGATTGTAAATATAAGGAATCATGCGTTGCAGATAAGCATAGGAGGTTTGTCCCTAATTCAGCCAACAATCTTAATCAGTATGACGTTTCACCTTCACTCACAGAAGCTATATCCTCAGTTGTTCTTGTCACGGTTAGTGAGACATCTTGGGCTTCAGGGATTATCCTCAATAAAAATGGCTTAATTATGACAAATGCACATCTTTTGGAACCTTGGAGGTTTGGAAGAACTTCGCCGTTAGGCTTGCAAAACAAAATTGCCTCATTTAGTGAACACATCTGTGGAGGAGAAAACAATCTGCTGCAGCCACAACAATGCAAAGTTTCAAATGAAGATGCTGTAAAACATGAACTTTCATTGTTTAATTTTGGATTAAAAAAGGACAGGGCAATATCGGTTCGTTTGGATCATGGAGAGAGGAAGACATGGTGCAATGCTAGTGTAGTTTTTATCTCAAAAGGTCCACTTGATGTTGCCTTGCTTCAAATGGAAAAAACTCCAATTGAATTATGTGCCATTAGACCAGAATTTGTTTGTCCAACAGCAGGCTCATCTGTATATGTGGTTGGACATGGCCTTCTTGGACCTCGATCAGGACTATCCTCCTCCCTTTCCTCTGGAGTGGTATCAAAGATTGTCAAAATCCCATCAACTCAACATTCCCAACTGTCTAGCGTTGTGGAGGTTAACAATATGGACATACCGGTAATGCTGCAGACAACAGCAGCAGTTCACCCAGGGGCAAGTGGCGGTGTTCTTCTTGATTCGCTTGGCCGAATGGTGGGGCTAATAACAAGCAATGCTAAGCATGGTGGTGGGAGCACAATACCTCATCTGAATTTCAGCATCCCCTGTAAATCTTTGGAAATGGTCTTCAAGTACTCAGCAAAAGGAGACTTCAAAATTTTGGAGCAGTTGGACAAACCCAATGAAGTGCTCTCATCCGTATGGGCACTGGCACCAACATCATCCCCTTTTTTCAGTACCTCCCCAGAAAATGGTAGAGGGGGAAAAGTTCTGGAGTTCTCAAAGTTTCTTGCTGATAAACAAGAAGGTTTGAAATCTATAAAAGATATAGAGGCATTCCTTAGAGACAGGATTCCCAGCAAAATTTAG</cdnaseq>

Protein Sequence

<aaseq>MAPREVAAAARGFSAMARIVGPDPKAVKMRRHAFHLHQSGSTTLSASALLLPPGSLAEPPPLLDRICAAHGHAGGVALTSASLVEPFLVEEQRNSPSQELQPRLVPEAHLDVLVEHEESRNIGGGKTGAPRWLSARLLAILYFSQQDSTVGLLVVDVQASADSVLSLLQHEGSLIRSSSWDVCWSLADVNQKQVDNDARYSLECNRKNAYAESTEPPMLAKSATRIAILGVSNLNSSNTRCINVSLMQQRGDSLLIMGSPFGILSPVHFFNSISVGVVANCLPPGTARSSLLMADVHCLPGMEGAPVFDKNSCLVGMLMKPLRQRGSSTEVQLVITWDAICNAWNSDKLERIGHPPSELVDDKSSDCKYKESCVADKHRRFVPNSANNLNQYDVSPSLTEAISSVVLVTVSETSWASGIILNKNGLIMTNAHLLEPWRFGRTSPLGLQNKIASFSEHICGGENNLLQPQQCKVSNEDAVKHELSLFNFGLKKDRAISVRLDHGERKTWCNASVVFISKGPLDVALLQMEKTPIELCAIRPEFVCPTAGSSVYVVGHGLLGPRSGLSSSLSSGVVSKIVKIPSTQHSQLSSVVEVNNMDIPVMLQTTAAVHPGASGGVLLDSLGRMVGLITSNAKHGGGSTIPHLNFSIPCKSLEMVFKYSAKGDFKILEQLDKPNEVLSSVWALAPTSSPFFSTSPENGRGGKVLEFSKFLADKQEGLKSIKDIEAFLRDRIPSKI</aaseq>

Gene Sequence

<dnaseqindica>1..66#185..231#343..523#602..652#827..901#959..1000#1780..1896#1974..2105#2209..2312#2960..3045#3145..3239#3318..4011#4157..4358#4645..4733#4833..5062#ATGGCGCCGCGCGAGGTTGCCGCAGCCGCGCGCGGCTTCTCGGCCATGGCGCGAATCGTCGGCCCGGTCAGTCCCCTGCCTCCCCACCACCACCACCACCACCACCATCACCTCATCTATCCGCGTAAGCTGTTCTCCCGAGTTCTCTCGCTGAACGCCACGCTGCTCTCCGCTCTTCCTCCAGGACCCCAAGGCCGTCAAGATGCGGCGGCACGCCTTCCACCTCCACCAGTGCGTCGCCGCCTCCCCTCCCCTCCCCTCCCCCGAATTCCTCGGCTTTGCTCGCGAGAATTTGAATCGGATTGACGAATCGTGTGCTTGCTTGGTTGGTTTCTCGTCCAGGTCGGGGTCAACCACGCTCTCCGCGTCGGCGCTACTCCTGCCGCCGGGATCACTGGCGGAGCCGCCGCCACTTCTCGATCGCATCTGCGCGGCTCACGGCCACGCAGGGGGCGTCGCGCTTACCTCCGCGTCGCTCGTCGAGCCGTTCTTGGTCGAGGAGCAGCGCAATAGCCCCAGCCAGGTTGGGTTCAGCTTACGCATCAGTGCGATTTGAGGTGTTTCTACTTTCTAATGATAATTTTTTATTGGTTGCTTGCAGGAATTGCAACCGAGGTTGGTACCAGAGGCTCATCTTGATGTGCTCGTTGAGGTGAGGATAGTAAACTGATGCATATCTTCGGGAGTATTAAGACTCAATATCAATGTTTGTTAAATTAAGGATACATAGGATTGAATATGCATTGTTGACTCTTCTGAACTGAAGACTTGCACATCGAAATTCTAGATTCAGGAAGACTTACTGAATTTACTGTGTCATATGCAGCATGAGGAATCAAGGAACATTGGAGGCGGGAAGACTGGAGCTCCACGGTGGCTTTCAGCTCGATTACTTGCCATAGTAAGTAGTTCTGCTGGTTATAACTTGAAAGTATATACTCTTTACCATGGATTTTAGCTTTACTTCTCTCAGCAAGATTCTACTGTTGGACTGTTAGTAGTAAGTGTGTAAACATCTACCGGGCCCTCACACCACAATAGGGTAGATTATTTGTTCTAGAGCTCATGGATTTGAAGGATGTTTTTTGGTTTCAGAAAGAATGATGATAAACGAGTATAGTTCACAGTTTAAAATTCTAAATGCTCTCTCGTGCATTTAGTCCCATTTGAAAGGAATGGATATTACAACAGACAGTGGCGGATCCAAAAATTTTCTTGACCTTGGGCAAGCGTGACGATAAATAACAAGTACTCCTACAATAACATACATATAAACTGTGAGAGAGATTAGATTGATAGGATTATGTTTATTTGTATTGTCAATGGACTAGGCTAGTATTGACTCACCATTTTGGCCTTAATTACTTTGCTATTTTGCATTGTTAATCTGGCCTCCAGTAGAAGCAGCAAAGCAGGATCGTACTGGTTCATTTGGCTGAGCCCAGGCACCGGCCCAAGGTGGCCGGGTCTGGGCTCCGCCATTGACAGCAGAGTTGTCTTGTATATACCAGTGATTTATGTGTTATGAGTTGTGACTGAACATTCCTAGCACTGCCCTATGAAAAATGATAAGAACTTTGGCAAGTTTGGACTGTTCGTTAGGAATGTTGTAAGAGCAGTAAACAGGATTTTGTTTATTGGATAATAATAAGTGTTACAAGTGATATACAATTGTGTTTTATCAGAAGAAATGTGTTTCATGTCTTCATCGACCTATAATAGAATTCTGTAAAAGCTATAAATGTTAATGATTGATCATCAGGCCCTTTTGTTTTTTAGGTTGATGTCCAAGCATCTGCTGATTCTGTATTATCCTTACTGCAACATGAAGGTTCATTGATTCGAAGTTCATCGTGGGATGTCTGCTGGTCATTGGCTGATGTCAACCAGAAGCAGGTCTGTTTGTTCATCAAGTCAAATTGTTGCCCTGATTTTATGTTGGACAAAACTTAACAGTTACGAGGTTTTATCAGGTTGATAATGATGCCAGATATTCCCTTGAGTGTAACAGGAAAAATGCTTATGCTGAGTCAACAGAGCCACCAATGTTGGCCAAGTCTGCCACAAGAATTGCTATTCTAGGAGTTTCAAACTTAAATTCAAGTGTGAGGCTAAGCTTGTCATTTCAATTCATGATCCTTAGCACCCTCGGAGGTGCAACTTATACTGCTGTTTGAGTTGTACTTAGTAATCTTGGTCAATGATCAGAATACAAGATGTATCAATGTTTCACTGATGCAACAACGAGGGGACTCCTTGCTGATAATGGGATCTCCATTTGGCATATTATCACCTGTCCATTTCTTCAATAGGTAATTTTAATTCTACTCCTTTAGTTCATTTGGGTATCTTGTTACCAATTTATAGGGGCCCATTAGACTGTTTGTTGAAACTCAGTATGTCACCTTAACTATAGAGCAAGCATATGTAACTAGCATGTTTGTAACATCAACGGGTGTTTAATTAAGGTGGAAGTGTTCGAGATTTCTTTATGTTGACCGGTGACTCGGTATAAATTTATAGACTTTAAACATTTCAAAATTTTGAAGCAATTGCCTGTCTGTTATGGGGATAATATTGAAGTGCCACTCTTTAGTCACCTATTAACTCACCTGATTTGCACACTGTTGCTAAAAATGAAAAGTGAAAACAGACATGACCTAGCATTTTTTGTCACGACCTCCCAGGGTTATAATCTTGTAATTTTTTCCTGCTCTATCAATAGAACTTTGCACTGTCTAGTGTGAGTCGTTAAAAAAAAACATTTTTTGTCAAGTGACCTACAAAAGCTAGTTGCCTTGTTAGTTAACAATTGGCTGTTGTACCTTATGGTGTTGGGAAAACATGATACATTACTATTTAATTTATAATACCACATTTATTAGCAGATAAGGAGGTACTGTCAGATTAATCCATAATATGCATTAATCCATAATATGCACCTGTGTTCTTTAAGCAGTATATCAGTTGGTGTTGTTGCAAATTGCCTCCCTCCAGGCACTGCCAGGAGCTCATTGCTGATGGCTGATGTCCACTGTCTTCCTGGTATAAATCCCTGTGCCTACTATTTATGTGGTACATTACAGAATTGGATTATGTTAAAAAAACATTAAAGCATTGGCTGTTAACAAATTCTCAACTAAGGTATGGAAGGTGCTCCAGTGTTTGACAAAAACTCTTGCCTTGTGGGGATGCTGATGAAGCCATTAAGACAGAGAGGCAGCAGCACAGAAGTTCAGGTGAGTTTACTAGTGTCAGTGAGATAATTTTTGCAAATAGAACGGATATAAAAACTGATATCTGCAACTGCAATACAGCTTGTAATTACCTGGGATGCAATCTGCAATGCATGGAACAGTGACAAGCTGGAAAGAATTGGCCATCCCCCAAGTGAATTAGTTGATGACAAAAGTTCAGATTGTAAATATAAGGAATCATGCGTTGCAGATAAGCATAGGAGGTTTGTCCCTAATTCAGCCAACAATCTTAATCAGTATGACGTTTCACCTTCACTCACAGAAGCTATATCCTCAGTTGTTCTTGTCACGGTTAGTGAGACATCTTGGGCTTCAGGGATTATCCTCAATAAAAATGGCTTAATTATGACAAATGCACATCTTTTGGAACCTTGGAGGTTTGGAAGAACTTCGCCGTTAGGCTTGCAAAACAAAATTGCCTCATTTAGTGAACACATCTGTGGAGGAGAAAACAATCTGCTGCAGCCACAACAATGCAAAGTTTCAAATGAAGATGCTGTAAAACATGAACTTTCATTGTTTAATTTTGGATTAAAAAAGGACAGGGCAATATCGGTTCGTTTGGATCATGGAGAGAGGAAGACATGGTGCAATGCTAGTGTAGTTTTTATCTCAAAAGGTCCACTTGATGTTGCCTTGCTTCAAATGGAAAAAACTCCAATTGAATTATGTGCCATTAGACCAGAATTTGTTTGTCCAACAGCAGGCTCATCTGTATATGTGGTTGGACATGGCCTTCTTGGACCTCGATCAGGTAACAAACATAACCAATCATAGTTTTTCAAGATAGCATTGGAAACAGTTTGATGCTCATTTTACCACGTGCTGATGTGCATGAGTACATTTCAGTTCATATCGTTTTTTTATTATGAAATTGATATCCAAGTATTTGACTGTAGGACTATCCTCCTCCCTTTCCTCTGGAGTGGTATCAAAGATTGTCAAAATCCCATCAACTCAACATTCCCAACTGTCTAGCGTTGTGGAGGTTAACAATATGGACATACCGGTAATGCTGCAGACAACAGCAGCAGTTCACCCAGGGGCAAGTGGCGGTGTTCTTCTTGATTCGCTTGGCCGAATGGTGGGGCTAATAACAAGGTATAAACCAAATTATTTTGGAGCCTCACATCATAGTATAATTGCATTTTTTTTGTGCTGTTACATGACAGAATTGATAGACAACTGAGAAAAAGATGTGCTGCTTAATTAATTGTGCCAGCTATACCAATTTTTGTGGTAAACATGTGCTATTTACGATACATTAATCATAATTTAAATGCTCCATATATGCAGTGACCACTTTCATTATGTAATGGTTCTAGATCATAGTGAGTAGAGTACGAATGGAATATAAGCTCATCTTCTTTTATTCCCACGTGTCCAGCAATGCTAAGCATGGTGGTGGGAGCACAATACCTCATCTGAATTTCAGCATCCCCTGTAAATCTTTGGAAATGGTCTTCAAGTACTCAGGTACCTTATTTTGTTCAAATTGTCTTCTTAATCAACATTGAATCAATCAAACTCCTTTAGTATATAGGACTTCTCAACCTTCTTGTTTTTCTTTAACAGCAAAAGGAGACTTCAAAATTTTGGAGCAGTTGGACAAACCCAATGAAGTGCTCTCATCCGTATGGGCACTGGCACCAACATCATCCCCTTTTTTCAGTACCTCCCCAGAAAATGGTAGAGGGGGAAAAGTTCTGGAGTTCTCAAAGTTTCTTGCTGATAAACAAGAAGGTTTGAAATCTATAAAAGATATAGAGGCATTCCTTAGAGACAGGATTCCCAGCAAAATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017794