BGIOSGA017813

From RiceWiki
Revision as of 02:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017813| Description = cDNA clone:001-029-D11, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA017813, complete gene.| t...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017813

Description

cDNA clone:001-029-D11, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA017813, complete gene.

LocusTag

OsJ_19025

Ensembl Transcript ID

BGIOSGA017813-TA

Ensembl Protein ID

BGIOSGA017813-PA

Length

1892

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25595558..25597449

Sequence Coding Region

25597374..25597449,25595558..25595931

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25595558..25597449 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25595558..25597449 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACCAGCTCACCGACGAGCAGATCGCCGAGTTCAAGGAGGCGTTCAGCCTCTTCGACAAGGACGGCGACGGTTGCATCACTACTAAGGAGCTTGGAACCGTGATGCGGTCCCTTGGTCAGAACCCAACTGAGGCGGAGCTGCAGGACATGATCAACGAGGTTGATGCTGATGGCAATGGGACCATTGACTTCCCAGAGTTCCTGAACCTGATGGCGAAGAAGATGAAGGATACCGACTCTGAGGAGGAGCTCAAGGAGGCCTTCCGTGTGTTTGACAAGGACCAGAACGGTTTCATCTCGGCTGCTGAGCTCCGCCACGTCATGACCAACCTTGGTGAGAAGCTGACCGACGAGGAAGTCGACGAGATGATCCGTGAGGCTGACGTCGATGGCGATGGCCAGATCAACTACGAGGAGTTCGTTAAGGTCATGATGGCCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK</aaseq>

Gene Sequence

<dnaseqindica>1..76#1519..1892#ATGGCGGACCAGCTCACCGACGAGCAGATCGCCGAGTTCAAGGAGGCGTTCAGCCTCTTCGACAAGGACGGCGACGGTAACGCGCGCCACCCACCACTCCCCCCTCTCTCTCTCTCTCTTCTCCTCCTCTTCCTCCCCCCACGTTGGGGCACGCGCGCGGTCTCTGGGCGGCGCGGCCGGATCGGGCGACGCGGAGCTCGATCCGGGCGAATTGCGGTGTCGCGGTAGGGTTTCGTGTGTCCAGGGGCGCTAGATCCGGTTGATCCTGTGACGGGTTGGGTGTGGATTTGTGGTTCGGCGGTGATTCGGGATGATTTCGCCTCGTTTAGCTGTTTTTGCTGTGCAGCGGCTGTGTTTTCGTGGGGGGCGTGATCTTAGCGGATTTTGTGTGTTTCGATGTATGGTGTGTTTTGGATTTTTGCCGTGCTTTAGAGGAATGGATGATTTGGGATCAGCAACTAGGCCCTTTGAACTAGGGGCTAAGAGCGGCAGAGAGTTGTTTGATTTGGAGAGGAGGATCCGTACATCGAGTTTTGTGAATCATGCCATTTGTTATTTAGCATGGCGTGAACATTGGTTTACATGATGATCTACCACGAGTGCTTGAGAATCTCTATGTGGAGTTAGGCCAATGATTCTGTGTGGTTTTGAAATTTGGGTGTGGAATATACCAAACTTTATGTAGAATTGAGGTGTGAATCTGGTTTTGCAATAGCAGTATGATGCCTATGGCTAGTTTGTTTAGGGGAAATTCTAGTGCTTCAGTTGATATTTGTCTTTGTACAACAGTGTTGAAAGAACTGTGGGTTGTACACCAGTAGTGTTGAAAGAAGTGTTGGGTGATAGTATGTTGGTGTACCATCATTACACGAAGGAAAAATAGAGACATCAATGCAGTTCTTAGACCAACATTTAAGATGTAAAGTGCTCTTTTGTGGCCATAGTTTATTAAAACCTATGTTTTGAATTCTTCGGCGGCCTGTAGTTATTTCTTGCTCGTGCGCAAGAGAAGTTCATTTTTAGCAAGTCTTAGATGCAAGCTGGGCTGGTTTGTGATTTGTGCCACATCTAGTGTACACAATAATTATTGATGTAGGTTTATGAGTTGATCGTATGCTAGTGCGGTGGCGGGAAGCTACCTAAGTGGCTGTTAAACCTAGGCATCACATTCTTATCGTTTCATGATTCTCATCTGGACTGTAGCATATAGTGGTCTGTGATTTGTATTATATGTTCAATGATTCTATCTAGCACTATCATTCTGTGAAATAGGTTCATAAATTGGCTGAAAGTGATAACGATACTGATGGTGGTTTTGTGATGTGTATGTACTCTGTTGTCAGGACTCAGGACAACTTTGATTTCTTGGTCTTAAAATTGTACTTTGTGGACATAAAACAATATTACAATATTGCAGCACTAAAGGACCATGTTGTGTTAATTTTATAAGCGTTGAACGAGATAATCGCATGTTCCATTTAGTACTCTCTTGTGCTGATCTCTGAATACATTGTGCAGGTTGCATCACTACTAAGGAGCTTGGAACCGTGATGCGGTCCCTTGGTCAGAACCCAACTGAGGCGGAGCTGCAGGACATGATCAACGAGGTTGATGCTGATGGCAATGGGACCATTGACTTCCCAGAGTTCCTGAACCTGATGGCGAAGAAGATGAAGGATACCGACTCTGAGGAGGAGCTCAAGGAGGCCTTCCGTGTGTTTGACAAGGACCAGAACGGTTTCATCTCGGCTGCTGAGCTCCGCCACGTCATGACCAACCTTGGTGAGAAGCTGACCGACGAGGAAGTCGACGAGATGATCCGTGAGGCTGACGTCGATGGCGATGGCCAGATCAACTACGAGGAGTTCGTTAAGGTCATGATGGCCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017813