BGIOSGA017823

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Revision as of 02:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017823| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017823, complete gene.| tag = OsI_204...")
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Gene Name

BGIOSGA017823

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017823, complete gene.

LocusTag

OsI_20420

Ensembl Transcript ID

BGIOSGA017823-TA

Ensembl Protein ID

BGIOSGA017823-PA

Length

3386

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25521198..25524583

Sequence Coding Region

25523877..25524583,25523740..25523794,25522733..25522843,25522405..25522637,25521756..25521963
,25521505..25521564,25521198..25521374

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25521198..25524583 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25521198..25524583 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCAAGACTGAGAGCAGAAAGTTGTCCGATGACTATGAAGTTGTGGATGTTCTTGGCCGGGGCGGGTTCTCAATAGTAAGGAGGGGAGTGAGCAAGTCTGAAGAGAAGACCCAGGTTGCCATCAAGACTCTGAGGAGGCTCGGCCCGGCGATGGCGGGTATGAAGCAGGGGACAAAGCCCGTGCCCGGCTCCGGCCTGCCGATGTGGAAACAGGTATCGATCTCCGACGCGCTGCTGACGAACGAGATACTCGTCATGAGGAGGATAGTGGAGAGCGTTGCGCCACATCCTAATGTCATCAACCTGCATGATGTGTATGAAGATGTGCATGGTGTGCACCTCGTCCTTGAGCTGTGCTCGGGTGGTGAGCTTTTTGATCGGATTGTGGGGCGTGACCGGTACTCGGAGTTCGATGCGGCCTGCGTCATTCGTCAGATTGCTAGCGGGCTGGAGGCTCTTCATAAGGCAAGCATTGTACACAGGGACCTGAAGCCGGAGAATTGTCTGTTCTCTGACAAAGATGAGAAGTCCACACTGAAGATCATGGATTTTGGTTTGAGTTCTGTCGAAGATTTCAGTGACCCAATCGTCGCGCTGTTTGGGTCAATAGATTATGTTTCACCGGAGGCTCTATCCAGGCAGGAGGTTTCAGCTGCTAGTGATATGTGGTCTGTTGGGGTAATTCTGTACATTCTTTTATCTGGATGCCCACCATTTCATGCTGCAACCAATCGAGAAAAGCAGCAAAGGATCCTGCAAGGTGAATTCAGTTTTCAGGACCACACATGGAAAACAATATCTTCATCCGCGAAAGATTTGATTTCGCGCCTTCTTTCTGTTCAACCTTACAAAAGGCCAACAGCAAGTGATCTTCTGAGGCATCCTTGGGTGATTGGAGACTGCGCCAAGCAAGATCTCATGGATGCAGAGGTCGTCTCAAAACTGCAAAAGTTCAATGCTAGAAGGAAATTGCGGGCAGCTGCGATAGCCAGCGTTTTGAGCTGCAAAGTGGCATTGAGGACTAAAAGGCTGAGAAATCTTTTAGGAACCCATGACCTTACCTCAGAGGAGCTGGATAATCTGCGGCTTCATTTTGGACGAATATGTGCAGATGGAGAAAACGCCACTCTGTCAGAGTTTGAGCAGGTGCTGAGAGCAATGAAAATGGACTCACTGATTCCCCTAGCTCCCCGCGTATTCGATCTGTTCGACAACAACCGTGATGGAACCGTCGACATGAGAGAGATCCTGTGTGGGTTCTCCAGCCTCAGGAACTCACGAGGCGATGATGCTCTTCGCTTGTGCTTCCAGATGTACGACGCTGATCGGTCAGGCTGCATCAGCAAGGAAGAGCTGGCATCAATGCTCCGAGCGTTGCCGGAGGAGTGCCTGCCAGGCGACATAACGGAGCCGGGGAAGCTGGACGAGGTGTTCGACCAGATGGACGCCGACAGCGACGGCAAGGTCACCTTCGACGAGTTCAAGGCCGCCATGAACAAGGACAGCGCCCTCCAGGACGTCCTCCTCTCCTCCCTCCGCCCACAGTAG</cdnaseq>

Protein Sequence

<aaseq>MSKTESRKLSDDYEVVDVLGRGGFSIVRRGVSKSEEKTQVAIKTLRRLGPAMAGMKQGTKPVPGSGLPMWKQVSISDALLTNEILVMRRIVESVAPHPNVINLHDVYEDVHGVHLVLELCSGGELFDRIVGRDRYSEFDAACVIRQIASGLEALHKASIVHRDLKPENCLFSDKDEKSTLKIMDFGLSSVEDFSDPIVALFGSIDYVSPEALSRQEVSAASDMWSVGVILYILLSGCPPFHAATNREKQQRILQGEFSFQDHTWKTISSSAKDLISRLLSVQPYKRPTASDLLRHPWVIGDCAKQDLMDAEVVSKLQKFNARRKLRAAAIASVLSCKVALRTKRLRNLLGTHDLTSEELDNLRLHFGRICADGENATLSEFEQVLRAMKMDSLIPLAPRVFDLFDNNRDGTVDMREILCGFSSLRNSRGDDALRLCFQMYDADRSGCISKEELASMLRALPEECLPGDITEPGKLDEVFDQMDADSDGKVTFDEFKAAMNKDSALQDVLLSSLRPQ</aaseq>

Gene Sequence

<dnaseqindica>1..707#790..844#1741..1851#1947..2179#2621..2828#3020..3079#3210..3386#ATGTCCAAGACTGAGAGCAGAAAGTTGTCCGATGACTATGAAGTTGTGGATGTTCTTGGCCGGGGCGGGTTCTCAATAGTAAGGAGGGGAGTGAGCAAGTCTGAAGAGAAGACCCAGGTTGCCATCAAGACTCTGAGGAGGCTCGGCCCGGCGATGGCGGGTATGAAGCAGGGGACAAAGCCCGTGCCCGGCTCCGGCCTGCCGATGTGGAAACAGGTATCGATCTCCGACGCGCTGCTGACGAACGAGATACTCGTCATGAGGAGGATAGTGGAGAGCGTTGCGCCACATCCTAATGTCATCAACCTGCATGATGTGTATGAAGATGTGCATGGTGTGCACCTCGTCCTTGAGCTGTGCTCGGGTGGTGAGCTTTTTGATCGGATTGTGGGGCGTGACCGGTACTCGGAGTTCGATGCGGCCTGCGTCATTCGTCAGATTGCTAGCGGGCTGGAGGCTCTTCATAAGGCAAGCATTGTACACAGGGACCTGAAGCCGGAGAATTGTCTGTTCTCTGACAAAGATGAGAAGTCCACACTGAAGATCATGGATTTTGGTTTGAGTTCTGTCGAAGATTTCAGTGACCCAATCGTCGCGCTGTTTGGGTCAATAGATTATGTTTCACCGGAGGCTCTATCCAGGCAGGAGGTTTCAGCTGCTAGTGATATGTGGTCTGTTGGGGTAATTCTGTACATTCTTTTATCTGGGTATGTTGGCCATTTTCTTGTTATAGTTCCCTTGATTAGGATTATTTTCGTAGTTTTAAGCCTGGTAGTTTGTGTATTTCAGATGCCCACCATTTCATGCTGCAACCAATCGAGAAAAGCAGCAAAGGATCCTGCAAGTAAGTTTCCTGAGCTAACTCTGGTCAAATTGTTGCTTCAATGGTGTTCAAAATGGTTTGGAATATTCTGGTTCGCATTTGACGATACCTATTAAACACTTCGGGCAATTTTAGTGGAAGCAGAATCATTATAAGTATTCTGATCAAGATGATTTATAAGTATCTTTGCATTTTCTAATGAAGCAGAATTATTATAATTCTGGCCCGTGAATGTGAGGGTGTTTTTCTTGCAAAAAATGGAATTTTGGTGAGAGTTACATGTAGCTGACCTCGAGTGTGAGTCGGCCATACGGTTTTCCAGTCCCAAATTATGTGTTGGGCATTTGATTCACTCTAAAATTTCAGCATGAGTGTGAAGTTGTTAGCCTTTTATCAGTGGGTTTGCAGCAAATGACATTGCATAGTTTGGAGATCTGCCTGCCAATCATTGCTGAAATGTCGTCTTTTGGTAGTTGTTAGCACTTCAGTTTATACCTGCATTGTCCTATATTTTGTCCAGTTCTAGTAGAAAAAGTTGCCCTGAGATGTCAAATCAATAGCAGTTGGCCAGTAGCTAACTAGACCTTACATTTTACTGAAAAGGTGTAAAAGAATGTTCTCTTCCACAAAAGACACATGGATTGGATTGTACATTTTCCAATGAAAAACACGAACTGAGTCAGTATGGATATGGGGCTACTGGGCTAGTCAAATGTTGTTCAGTAAACCACTGAAAAAATAAATAAACTGTGCCGTTTGTTTCTGAAGAATTATGGGTTCCATTATCAATAGTGCCTTTGAATAACATGACTATAAGAGGAGGATTTGTAGTCCTTGTGTTAGGCACCAATTATTCGAAAATGCCTGTATTAATCAGGAACTTGCTCTAATGGCATATAATTTGTGTGCTTCTTCAGGGTGAATTCAGTTTTCAGGACCACACATGGAAAACAATATCTTCATCCGCGAAAGATTTGATTTCGCGCCTTCTTTCTGTTCAACCTTACAAAAGGCCAACAGCAAGTGATGTCTGTCTCATATGCTCCCTTTTCAGCATATTACCATGTTAGCTAAGATACTATAACTGTTCTTAATTTGAATATCATGTGTCATTTGAAACCAGCTTCTGAGGCATCCTTGGGTGATTGGAGACTGCGCCAAGCAAGATCTCATGGATGCAGAGGTCGTCTCAAAACTGCAAAAGTTCAATGCTAGAAGGAAATTGCGGGCAGCTGCGATAGCCAGCGTTTTGAGCTGCAAAGTGGCATTGAGGACTAAAAGGCTGAGAAATCTTTTAGGAACCCATGACCTTACCTCAGAGGAGCTGGATAATCTGCGGCTTCATTTTGGACGAATGTGAGTATCATGACTTGATCAGCCTAAAACCTCTTGTGTAATTACTAGAATTTTGGGACTAGCATTTCTCAGTTAGTAATTTGAGGAACACTACAGTTGCTTTAAGGGGGAGTCATATATCCTTGTCTTCTCTGAAAACAAATGTTTTTTTTTCCAACACTGAAGAAGTCCCAATTTTGCAGGAGTATATTTGCACATATCATATATCATGTGCAGCCCATTTTATTAGGATTTTAGGAGTAGAAGATATGTGCTATGATGAACTGTGAAATTAACACCGAAAAGATTTATAAGCAGAAAGCGGTAGCCTTTTTTTCCTTTGCCAGAGAAGCTTCAGAAGTTCAGATTTCTCGTAAAACCTTCATAGTTTTAGGATTTAAACATGACACATATGATGTTCCAATCGAAAAGTATAACACTAAGCAAGTGCTCTTTATGCAGATGTGCAGATGGAGAAAACGCCACTCTGTCAGAGTTTGAGCAGGTGCTGAGAGCAATGAAAATGGACTCACTGATTCCCCTAGCTCCCCGCGTATTCGATCTGTTCGACAACAACCGTGATGGAACCGTCGACATGAGAGAGATCCTGTGTGGGTTCTCCAGCCTCAGGAACTCACGAGGCGATGATGCTCTTCGCTTGTGCTTCCAGGTAAAAATTTCCAAATGCACTCGACTCAAACTGAAGTGGCAGCCCTTCCAATTTATGTACAGGAATATCAGAAACATTGCATGATATCATATCATACATAACTTCAAATTCAATTAAAATTCATAACAAGAGAGGTATTTCAGCATCTGATCATGAGCACACAAAAAAAAAAACTGCATTTTTCTTTTCAGATGTACGACGCTGATCGGTCAGGCTGCATCAGCAAGGAAGAGCTGGCATCAATGCTCCGAGTAAGAACTCCTAAAAAAGGAAAACCAAATCTTTGCTCTTCTTGAGATGGCTTGTTCATGTCTCTTTTCAAGTTTTGAGTTGAAAATCTGACGAGCTGCTGTTCATCTGAACTTTGGTGATCCTCACAAGGCGTTGCCGGAGGAGTGCCTGCCAGGCGACATAACGGAGCCGGGGAAGCTGGACGAGGTGTTCGACCAGATGGACGCCGACAGCGACGGCAAGGTCACCTTCGACGAGTTCAAGGCCGCCATGAACAAGGACAGCGCCCTCCAGGACGTCCTCCTCTCCTCCCTCCGCCCACAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017823

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017823&oldid=46579"