BGIOSGA017838

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Revision as of 02:25, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017838| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017838, complete gene.| tag = OS05G04...")
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Gene Name

BGIOSGA017838

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017838, complete gene.

LocusTag

OS05G0485500

Ensembl Transcript ID

BGIOSGA017838-TA

Ensembl Protein ID

BGIOSGA017838-PA

Length

4163

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25312791..25316953

Sequence Coding Region

25316806..25316953,25316591..25316619,25316437..25316484,25316194..25316250,25315607..25315709
,25315470..25315519,25314952..25315247,25314012..25314366,25313380..25313925
,25312791..25313072

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25312791..25316953 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25312791..25316953 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGGGCCAGGGTGGCGGCGCGGGGGCCCCGGCGAAGAGGCGGTGGAGGAGCGTGGCGGCCGCGGCCGCCGCGCTGGCGCTGCTGTTCCTCTCCGTCGGCGTGCCGCTCGCCGTGCTGCTCGGCCTCCACCAGCGCTTCCCGTCCATGTATTTGGCCGACGAGAGCGCCGTGTCGGTGTTTGGCGGCAGCGAGGGTGGTGGTTGGGAGCCAAATACATCGCAGGAAAATGACAGGCTGCCAGTCAACGACACGAACAAATTTCTGCCATCGATTGAAAAGGACTGGAGCAAAACAAATACCGGTAATTCTGATGCAGAAAGCAATGGGACCAACAATCAACCAAGTATTGACAAACCGATTAGCAATACCTCAATCCATCCAGGCCTTCCTATCAAACAAATCGTGATCTTTGATGATATATCATTACTGAGTAATACTGATGCTGATCCTAAGGACAATTTTGAACAAGGTTTACCTGGTGATGAGAGTATAAAATCGTGCCAACTAGAATTTGGAAGCTATTGTGTTTGGTCTGTTGAACACAAGGAAGTGATGAAAGATTCTGTAGTGAAGAGACTTAAAGACCAGCTCTTTGTTGCAAGAGCTTACTATCCAAGCATAGCAAAACTTGAGGGGATGGAAAAACTTTCACATGAAATGAAGCAAAGTATCCAAGAGCATGAGCACATGCTCAGCGAAGCCATATGTGATGCTGATCTTCCTGCATTCCATGGAGCCAATATGGCAAAGATGGAGAAGACAATAGCTGCAGCAAAATCATGTCTGATAGAATGCACTAATTTTGAGAAAAAACTGAGGCAATTGCTTGATATGACTGAGGATGAAGCTCATTTTCATGCAAGACAAGGTGCATATCTTTACCGGCTTGGAGTTCAGACATTACCTAAGAGCCTCCACTGCCTTTCAATGAGATTGACAGTAGACTACTTTAAATCCTTTGCTGACATGGAGTACTCCAATGTGCAAAAGCTTGAAAATCCAGTTCTCCGGCACTATGTTATTTTCTCTACCAACCTTCTTGCATCTTCCATGACTGTCAACTCGACTGTGATAAATTCTGAGGAATCAGCAAATGTGGTTTTTCATCTTGTTACTGATGCACAGAACTTTTATGCATTTAAGAATTGGTTCATTAGAAATTCTTACAAGGAAGCCACTATCGGTGTTCTGAATTTTGAAGATTTCCAAGCAACACATTTGGATAATAGGAGAGTTGAACACTTATCACCATATGAGGAGTTCCGCATCGCTTCCCATAGCAATGCCCGAATTCCAAATACCCAAATGAGAACTGAATATATTTCAGTGTTTGGACACTCTCTTTTCTTGCTTCCTGAGCTGTTTAGCAATCTTAAACGGGTGATTGTTTTGGAAGATGATACTATAGTCCAGAGAGACTTGTCACACATATGGAATCTTGATTTGAAAGGAAAAGTGATTGGTGCTGTACAGTCTTGTCGAGTTAGATTAAGGCATCTCAGACCATACTTGGTTGACTTCCCATATGATGCTAGTTCATGTATCTGGATGTCTGGAGTGAGTGTTATTGATCTCAATAAATGGAGGGAGCATGATGTGACTGCAGTTCGTAATCGAGTACTCCAAAAGCTGCAACATGGCCCTGAAGCGTCATGGAGAGCTGCGGTGTTACCTGCAGGCCTGCTTGCTTTTCAAAATCTGGTCCATCCTATTGAAGCACAGTGGATCCAGTCTGGTCTTGGTCATGACTATGGAGTCAATCATGGTGCTATAAAGAAAGCTGGCATATTGCACTACAACGGCAACATGAAACCGTGGTTAGAACTCGGCATACGGCGATACAGGAAATATTGGAGAAGGTACCTGCCAAGGGATGATCCATTCTTGATAGATTGCAATGTGAATCCATGA</cdnaseq>

Protein Sequence

<aaseq>MKGQGGGAGAPAKRRWRSVAAAAAALALLFLSVGVPLAVLLGLHQRFPSMYLADESAVSVFGGSEGGGWEPNTSQENDRLPVNDTNKFLPSIEKDWSKTNTGNSDAESNGTNNQPSIDKPISNTSIHPGLPIKQIVIFDDISLLSNTDADPKDNFEQGLPGDESIKSCQLEFGSYCVWSVEHKEVMKDSVVKRLKDQLFVARAYYPSIAKLEGMEKLSHEMKQSIQEHEHMLSEAICDADLPAFHGANMAKMEKTIAAAKSCLIECTNFEKKLRQLLDMTEDEAHFHARQGAYLYRLGVQTLPKSLHCLSMRLTVDYFKSFADMEYSNVQKLENPVLRHYVIFSTNLLASSMTVNSTVINSEESANVVFHLVTDAQNFYAFKNWFIRNSYKEATIGVLNFEDFQATHLDNRRVEHLSPYEEFRIASHSNARIPNTQMRTEYISVFGHSLFLLPELFSNLKRVIVLEDDTIVQRDLSHIWNLDLKGKVIGAVQSCRVRLRHLRPYLVDFPYDASSCIWMSGVSVIDLNKWREHDVTAVRNRVLQKLQHGPEASWRAAVLPAGLLAFQNLVHPIEAQWIQSGLGHDYGVNHGAIKKAGILHYNGNMKPWLELGIRRYRKYWRRYLPRDDPFLIDCNVNP</aaseq>

Gene Sequence

<dnaseqindica>1..148#335..363#470..517#704..760#1245..1347#1435..1484#1707..2002#2588..2942#3029..3574#3882..4163#ATGAAGGGCCAGGGTGGCGGCGCGGGGGCCCCGGCGAAGAGGCGGTGGAGGAGCGTGGCGGCCGCGGCCGCCGCGCTGGCGCTGCTGTTCCTCTCCGTCGGCGTGCCGCTCGCCGTGCTGCTCGGCCTCCACCAGCGCTTCCCGTCCAGTCCGTAACCACCCACCCCTCTCTCCCCTGCCAAAACCCTACTTTTCTCTTCAGCCTCTCCGCTCCCAGATCTGGGCTTCCCGTCCGGCTCGCCGGCTCGCGCTCGATCTAGGGGCTCATCAACTCTCTCTCTATGCTCCCCTGACTCGATTTTGTTTGTATTTGTTTTGTCTTTTGATATCACAGTGTATTTGGCCGACGAGAGCGCCGTGTCGGTGAGTGTCAATTGAGATTGAAACTAACTAGTAGCTCATGCTTAAGCCATTTGATTTGTTTAATCCATTGCTGTTAAGATTTTTGCCTCATGTTTCTGTTGCACAGGTGTTTGGCGGCAGCGAGGGTGGTGGTTGGGAGCCAAATACATCGCAGGTAGGGGGTGTGCTCATGATTGCCATTTCTGGGATATTTTTGTTCTATTACCTGAAATGTTCCAATCACATGGGGGTGTGGTTAGGTGTATTTATCCTAATTAGGTTTGGTCAATGATGACTGATGGGGTACTACTGCGGGAAGAGAATTTAATGTTTAGATCAGTGATGCATTTTTTTTTCGCAGGAAAATGACAGGCTGCCAGTCAACGACACGAACAAATTTCTGCCATCGATTGAAAAGGTTTGCATTTGAGCCCATCGGCCGCAGCTGTTTCTTCTCTTTGTTCATGCGTGAAATTTTATCCAAGTAGAGTGCTTGTTGTGAGTTGCTATCGTGCCGATTGTGGTCTCATGGGTAGTGTTTGAGTGGAATTGCCTTTTAATACATGGTCCATGGCCCCATTTTTTTGGAAATGTCAGTCTGCTTTTGCCATATCATGGATCTTGTTTCACATGGCCCTCTTTTGCATTTCTACTGCAATCAAGGCACTGTTTCTTTCCTTTTGGCATGTAAGAGGCTCAGCTCTGCATTTCTACTGCAATCAAGGCACTGTTTCTTTCCTTTTGGCATGTAAGAGGCTCAGAGCTGAATGGGGTTTTGAACTTACTAACTGTTTGTCACTATGTCCCAAAAATTGCATTGCATCATCTGAAAATCTTGTCTATCTACCGAAACATGCAATTTTTTTTTGCGTTACCTAATTGATTTAGTTGTTCGTTCACAGGACTGGAGCAAAACAAATACCGGTAATTCTGATGCAGAAAGCAATGGGACCAACAATCAACCAAGTATTGACAAACCGATTAGCAATACCTCAATCCATCCAGGTAAGCAGGGCCCATTCGTTGACCACTTATTTAGTTTTAAAATTTTAAATATCAAGTTACAGCTTTAATTCTTCTTGTAATGTGCAGGCCTTCCTATCAAACAAATCGTGATCTTTGATGATATATCATTACTGAGTGTAAGAGCTAATATGCTTTACAGTTATTTTTAACATGCCCTTGTCTGTTCGTGCAGTAAATATATATGCTGCTTTCGCATGAATTTCTGAGCAGGGCATGTGATATGCACCTTGCTTTTGCAATATTTTAAAGAAACATTTCAATAATCCTTTGTAACTTGTTTGCGGACTTGCAGAATTATCATATATTACATACTTTTTATTTTTCACCTAATGTTGCAGAATACTGATGCTGATCCTAAGGACAATTTTGAACAAGGTTTACCTGGTGATGAGAGTATAAAATCGTGCCAACTAGAATTTGGAAGCTATTGTGTTTGGTCTGTTGAACACAAGGAAGTGATGAAAGATTCTGTAGTGAAGAGACTTAAAGACCAGCTCTTTGTTGCAAGAGCTTACTATCCAAGCATAGCAAAACTTGAGGGGATGGAAAAACTTTCACATGAAATGAAGCAAAGTATCCAAGAGCATGAGCACATGCTCAGCGAAGCCATATGTGATGCTGATCTTCCTGCATTGTAAGTAATCTTCCAGAAATACTTTCTTTAGTTCTCATTTTTAAGCTATCATCTTTAATCCATAAGGCACTGCTAACTTCAGAAATTGATATTTTACCATACATGAAACTGTTGGGTATTTAAGCAGCCTGACTTTGCACCAAAAATGGTCTACCTACTAACTGTTGTGCTTCACTGTTTGTTTTTTATTTTCACAGATTTTGATATCCACTGTCGTCTAATATGCACGTATACAAGATAACTTATGCATAATTGACAGCCTACAGTTGATTGAGCATTACCTGAATGATTCCTTAGGATTATCTCTTTCATCACCTAGCATGTTCGTAGTCCTTATTATTTTGTGAAATGTATTAACACTCTGTAGTTTGATCGAATAACATTGTATTAAGCTAAAAGTGTGATATTGGGATGAATAATTTACCAATAATTGTAGCAGTAAGTTCTAAATGATGAGTGGACTGATGATCTGATGGCTCAATGTGTTATACAGATTCACTTTGGAACAGAAAATTTCCCCATAGGTTTAGAGTTTGCTATAATGATTATTTGTTTTGTTATAGTGATTATTTGTTATTTTTGAAGCCATGGAGCCAATATGGCAAAGATGGAGAAGACAATAGCTGCAGCAAAATCATGTCTGATAGAATGCACTAATTTTGAGAAAAAACTGAGGCAATTGCTTGATATGACTGAGGATGAAGCTCATTTTCATGCAAGACAAGGTGCATATCTTTACCGGCTTGGAGTTCAGACATTACCTAAGAGCCTCCACTGCCTTTCAATGAGATTGACAGTAGACTACTTTAAATCCTTTGCTGACATGGAGTACTCCAATGTGCAAAAGCTTGAAAATCCAGTTCTCCGGCACTATGTTATTTTCTCTACCAACCTTCTTGCATCTTCCATGACTGTCAACTCGACTGTGATAAATTCTGAGGTATGATATTACTTTTGTTGTGTAGACCATGTGGTCTCTTGAAATTTCTGCATCATGACACTCACCAGTTCTTTTCAGTGTTTCAGGAATCAGCAAATGTGGTTTTTCATCTTGTTACTGATGCACAGAACTTTTATGCATTTAAGAATTGGTTCATTAGAAATTCTTACAAGGAAGCCACTATCGGTGTTCTGAATTTTGAAGATTTCCAAGCAACACATTTGGATAATAGGAGAGTTGAACACTTATCACCATATGAGGAGTTCCGCATCGCTTCCCATAGCAATGCCCGAATTCCAAATACCCAAATGAGAACTGAATATATTTCAGTGTTTGGACACTCTCTTTTCTTGCTTCCTGAGCTGTTTAGCAATCTTAAACGGGTGATTGTTTTGGAAGATGATACTATAGTCCAGAGAGACTTGTCACACATATGGAATCTTGATTTGAAAGGAAAAGTGATTGGTGCTGTACAGTCTTGTCGAGTTAGATTAAGGCATCTCAGACCATACTTGGTTGACTTCCCATATGATGCTAGTTCATGTATCTGGATGTCTGGAGTGAGTGTTATTGATCTCAATAAATGGAGGGAGCATGATGTGACTGCAGTTCGTAATCGAGTACTCCAAAAGGTTAGTATTGAATAGTGATGCTTAGCAGCTGTCTTTTCTTCTCTCTTTCAAGAATTGTTTTTAAGAAACTACTTTCGATGTTATATTTGACATAAGGCATATTCCTCATGGCTATACTCTTGATTTTCTGTTTGTGTTCAACTGAACTTACCCTACTGTACCGTGATCTTCACTAATAAGATAAACTTGCTTGAAGCCTTGAAGTTTATTTAAGATATGTATTTTTTTTCTTGCACGTTTGGCCTGTTAAGCGAAGAGCTGCAAATTCTTAACTGATATGGTTGTGCCTATGTCTCACTTTTGACAGCTGCAACATGGCCCTGAAGCGTCATGGAGAGCTGCGGTGTTACCTGCAGGCCTGCTTGCTTTTCAAAATCTGGTCCATCCTATTGAAGCACAGTGGATCCAGTCTGGTCTTGGTCATGACTATGGAGTCAATCATGGTGCTATAAAGAAAGCTGGCATATTGCACTACAACGGCAACATGAAACCGTGGTTAGAACTCGGCATACGGCGATACAGGAAATATTGGAGAAGGTACCTGCCAAGGGATGATCCATTCTTGATAGATTGCAATGTGAATCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017838

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