BGIOSGA017846

From RiceWiki
Revision as of 02:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017846| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017846, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017846

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017846, complete gene.

LocusTag

OSJNBA0095J22.15

Ensembl Transcript ID

BGIOSGA017846-TA

Ensembl Protein ID

BGIOSGA017846-PA

Length

3850

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25186910..25190759

Sequence Coding Region

25190697..25190759,25190456..25190623,25189847..25189974,25189089..25189239,25188759..25188962
,25188384..25188608,25188064..25188248,25187630..25187822,25187452..25187547
,25187192..25187347,25186910..25187074

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25186910..25190759 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25186910..25190759 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTAGAACGGGATTGCTGCGACATTGTTCTTTTTTTTTTTTGTGTGTGTGTGTGTGGCAGTTGGTGATGGGAAGCTCAGATTTCTCGTGGACATTGCCTGATCACCCAAAGCTCCCTAAGGGGAAGCCGGTGGCCGTGGTTGTACTGGATGGATGGGGTGAGGCTGATGCGGACCAGTATAACTGCATCCATGTTGCTGAGACACCAACAATGGATTCGCTCAAGAAGGGTGCTCCAGAGAAGTGGAAGCTTGTAAAGGCTCATGGAACAGCTGTTGGTCTCCCTTCTGATGATGACATGGGTAACAGTGAGGTTGGGCATAACGCACTTGGTGCTGGTCGGATTTTTGCTCAAGGGGCTAAACTTGTGGATACTGCTTTGGCCTCTGGAAAAATTTTTGAAGGAGAAGGGTTTAAGTACATTAAGGAGAGTTTTGACCAAGGCACTCTTCATCTTATTGGGTTGTTGAGCGACGGAGGTGTCCACTCACGGCTTGACCAGTTGCAGTTGCTCCTGAATGGTGCAAGTGCGAATGGAGCGAAAAAAATCCGTGTTCACATTCTTACTGATGGACGTGATGTTTTGGATGGCACAAGCGTTGGTTTTGTTGAAACGCTAGAGAATGATCTTTCTCAACTGTGTGCCAAGGGCATTGATGCGTGCATTGCATCAGGTGGTGGAAGGATGTATGTTACCATGGACCGATATGAGAATGACTGGGATGTTGTTAAACGTGGATGGGATGCTCAGGTGCTTGGAGAAGCACCTCACAAGTTCCAAAACGCTGTTGAAGCTGTGAAAACACTCCGGTCAGAGACCAAGGCTAATGATCAGTATCTTCCCCCATTTGTGATTGTTGACGATAGTGACAAGGCTGTTGGGCCTATAGTAGATGGTGATGCAGTTGTGACCTTCAATTTCCGTGCTGATCGCATGGCTTTAGAGTATGAAGATTTTGATAAATTTGATCGTGTTCGTGTCCCAAAGATCCGATATGCTGGTATGCTTCAGTATGATGGTGAGCTGAAGCTTCCAAGCCACTACCTTGTTTCACCACCAGAGATTGAGAGGACATCCGGTGAATACTTGGTGAAAAATGGCATCCGCACCTTTGCTTGCAGTGAAACTGTGAAGTTCGGCCATGTCACATTTTTCTGGAATGGAAACCGCTCTGGATACTTCGATGAAACAAAGGAAGAGTATGTGGAAATCCCTAGTGACAGTGGTATCACATTCAATGTTAAACCCAAGATGAAGGCCCTTGAGATTGCTGAGAAAGCTAGAGATGCTATCCTTAGTGGCAAGTTTGACCAGGTCCGCGTTAACCTCCCAAATGGTGATATGGTGGGTCACACTGGTGACATTGAGGCCACAGTGGTTGCTTGCAAAGCTGCTGATGAGGCTGTCAAGATGATTCTGGATGCCATTGAGCAAGTGGGTGGCATCTATTTGGTCACCGCCGATCATGGCAACGCCGAGGATATGGTGAAGAGGAACAAATCCGGCCAGCCACAGCTTGACAAGAAAGGCGAAATCCAGATTCTTACCTCACACACTCTTCAGCCAGTGCCAGTTGCCATTGGAGGCCCTGGCCTACATTCTGGGGTGAGATTCCGCAACGACGTGCAGACCCCTGGCCTCGCCAACGTCGCCGCCACCGTGATGAACCTCCACGGGTTTGAGGCCCCTGCTGACTACGAGCCAACCCTAATTGAAGTAGTTGACAAATAA</cdnaseq>

Protein Sequence

<aaseq>MVRTGLLRHCSFFFLCVCVWQLVMGSSDFSWTLPDHPKLPKGKPVAVVVLDGWGEADADQYNCIHVAETPTMDSLKKGAPEKWKLVKAHGTAVGLPSDDDMGNSEVGHNALGAGRIFAQGAKLVDTALASGKIFEGEGFKYIKESFDQGTLHLIGLLSDGGVHSRLDQLQLLLNGASANGAKKIRVHILTDGRDVLDGTSVGFVETLENDLSQLCAKGIDACIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFQNAVEAVKTLRSETKANDQYLPPFVIVDDSDKAVGPIVDGDAVVTFNFRADRMALEYEDFDKFDRVRVPKIRYAGMLQYDGELKLPSHYLVSPPEIERTSGEYLVKNGIRTFACSETVKFGHVTFFWNGNRSGYFDETKEEYVEIPSDSGITFNVKPKMKALEIAEKARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADEAVKMILDAIEQVGGIYLVTADHGNAEDMVKRNKSGQPQLDKKGEIQILTSHTLQPVPVAIGGPGLHSGVRFRNDVQTPGLANVAATVMNLHGFEAPADYEPTLIEVVDK</aaseq>

Gene Sequence

<dnaseqindica>1..63#137..304#786..913#1521..1671#1798..2001#2152..2376#2512..2696#2938..3130#3213..3308#3413..3568#3686..3850#ATGGTTAGAACGGGATTGCTGCGACATTGTTCTTTTTTTTTTTTGTGTGTGTGTGTGTGGCAGGTATGTGTTCTGAGATGGTTAATTTCATGTTCTAACTTTGATTTCTTTATATCTGTGATTTTGGTAGGTTTAGTTGGTGATGGGAAGCTCAGATTTCTCGTGGACATTGCCTGATCACCCAAAGCTCCCTAAGGGGAAGCCGGTGGCCGTGGTTGTACTGGATGGATGGGGTGAGGCTGATGCGGACCAGTATAACTGCATCCATGTTGCTGAGACACCAACAATGGATTCGCTCAAGAAGGTATATTTTCTTAGCTTTTAGTATGTAGTTAAGGCCTTGGAGGTTAGCCACCATAGATGTAATTTGCTGTGTATTGTTTTTGAAGAATCTGTGGTGGTTAGGTGACAGGTGAAACCTGAAGCACAAATTCTTTGTTTCCTCCAACCAATTATCTTCGCCCTACCTTTGCTAGGGGCTTCTCCTTCATGTAGTTGTCTTAGTAAATTGACTCTAGTACATTTTGTGGGTGGTATGGTTGGTATTTTTAGACAAATTGTCACAGTGAAGAAATACTGTACTCGTTAAGTATGGTACCTGGATCACTGTCTTTGCATGTTCCGTGCATACTAACATTCCATTATGAGTTGTAGGCAATGGATTCTGACCTTGTTTGCGACATATATTAGAACAAGTTTAGTATGATATTGTTGAAACGCTTTATGATGATTGTTCTTACCCTTTTACTTAACTTCATGGTTTATCTTGTTTTCTATGTTTCAAGGGTGCTCCAGAGAAGTGGAAGCTTGTAAAGGCTCATGGAACAGCTGTTGGTCTCCCTTCTGATGATGACATGGGTAACAGTGAGGTTGGGCATAACGCACTTGGTGCTGGTCGGATTTTTGCTCAAGGGTACATGTTTCTCCTGGTTCTCTTTTTTATTAGCACACTGTCAGTTATAATCTGTGGATGGCCAAAAAGTATTGCGTTTGTTTCTAAAGGTCTTATTACATCAGGTTTCTGTTGCTTGGCTTATTTGTGTGCCAGATTTAGTAAAATCAAATGGCAACCATTGGTTCCTTTTGGCATCTTAAGTGTTAGATTTACACAGATCTCTCCAAATGATGTGGATTACCACATGAGCATGAAAGAGATATCATCATTACTATCTCATGTTATTATACAAATCATGCACTTCCTTTAGCAGCTACTAGTACTAACTAAAAAGATATCCCGTGTACTGATTTACAAACTTTAGAGATGAAGGGTAGTTCTTTTATGAACAACTGTTTGAGTTGTATGTTATACTTGACATGCAGCGACTTTTTGAAGGCATGCCAACTACTCGTGGTGCTGTGTACTTCAAGTTATTCCAAATTTTCTCTTTAAATTACTAAATCCATGTGGTGCCTTTAGACATTGCCATTATGCCGTATATGAAATCATTCTTTTAAGAAAGAAGTTAGAAGCCTCAGACTTAAGCCTCTAAATATACCATGTTCTCCATTTTCTTTTGTAGGGCTAAACTTGTGGATACTGCTTTGGCCTCTGGAAAAATTTTTGAAGGAGAAGGGTTTAAGTACATTAAGGAGAGTTTTGACCAAGGCACTCTTCATCTTATTGGGTTGTTGAGCGACGGAGGTGTCCACTCACGGCTTGACCAGTTGCAGGTATAAAAGTACTCTTTTCTATAGTTTGCTATCATCTTGTATAGTATGAGGCACTAATGTTTCTTTACAACATGTTGATCTGTCCAGTATCTAATTCTTTTTGTCTTTTGTCATTCCTGTTTATAGTTGCTCCTGAATGGTGCAAGTGCGAATGGAGCGAAAAAAATCCGTGTTCACATTCTTACTGATGGACGTGATGTTTTGGATGGCACAAGCGTTGGTTTTGTTGAAACGCTAGAGAATGATCTTTCTCAACTGTGTGCCAAGGGCATTGATGCGTGCATTGCATCAGGTGGTGGAAGGATGTATGTTACCATGGACCGATATGAGGTATGAATACCCTCCTTCCTCTCTGTCAGTTTGGATTGCTCATATCTTATCTCTCAGCTGCATTCTGTTTTTATTGCAACTCTTTCTGACTTGGGATAATATGTACTAATGGAAGTATTGAACTATTTGTTTAATATCTCAATTTTGCAGAATGACTGGGATGTTGTTAAACGTGGATGGGATGCTCAGGTGCTTGGAGAAGCACCTCACAAGTTCCAAAACGCTGTTGAAGCTGTGAAAACACTCCGGTCAGAGACCAAGGCTAATGATCAGTATCTTCCCCCATTTGTGATTGTTGACGATAGTGACAAGGCTGTTGGGCCTATAGTAGATGGTGATGCAGTTGTGACCTTCAATTTCCGTGCTGATCGCATGGTTATGATTGCTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTATAGTAGATGGTGATGCAGTTGTGACCTTCAATTTCCGTGCTGATCGCATGGTTATGATTGCTAAGGCTTTAGAGTATGAAGATTTTGATAAATTTGATCGTGTTCGTGTCCCAAAGATCCGATATGCTGGTATGCTTCAGTATGATGGTGAGCTGAAGCTTCCAAGCCACTACCTTGTTTCACCACCAGAGATTGAGAGGACATCCGGTGAATACTTGGTGAAAAATGGCATCCGCACCTTTGCTTGCAGGCAAGTTTTTTTTTCACCATTTTCTCAATTGGATACTAAACTGATTGAATCAATTGTGGAATGCTTTTCTCGGGGACATATGGCTGTTTTTATTCAGCCAATCTTGTATTTCAGTATATGAACTATTCAGACAGTATATGAAGTAACATAATTGGAAAATAACTTATAGTTGCACTGTAATTTCTTTCTAACTCTACCAATTTGTCCAACTTTACTTACTGAATTGACTCATTTGTTCCAGTGAAACTGTGAAGTTCGGCCATGTCACATTTTTCTGGAATGGAAACCGCTCTGGATACTTCGATGAAACAAAGGAAGAGTATGTGGAAATCCCTAGTGACAGTGGTATCACATTCAATGTTAAACCCAAGATGAAGGCCCTTGAGATTGCTGAGAAAGCTAGAGATGCTATCCTTAGTGGCAAGTTTGACCAGGTAAAAAACAGCACTTGTGTGCGACTTTGATAGGTTTGTTAAATTATTTACCCCTAAAATGCTTAACATTCTGTTCTTACAGGTCCGCGTTAACCTCCCAAATGGTGATATGGTGGGTCACACTGGTGACATTGAGGCCACAGTGGTTGCTTGCAAAGCTGCTGATGAGGCTGTCAAGGTGAGAACGAAGATGAGAAGATAGTTTCTTCTGTCTTTCTATACTGAATTTGAATTTGAACCACTCAAATTTGACGAGAATGGCTGTTCCTTCTTTTGTGATAGATGATTCTGGATGCCATTGAGCAAGTGGGTGGCATCTATTTGGTCACCGCCGATCATGGCAACGCCGAGGATATGGTGAAGAGGAACAAATCCGGCCAGCCACAGCTTGACAAGAAAGGCGAAATCCAGATTCTTACCTCACACACTCTTCAGCCAGTAAGTGCAGAGCAGGATCTAGGCTTGGACTATGCTCCCTAATCCCAATTTAACCTGCTTTGCTGCATGCCTGTGTTGATTTTAATCTTGCTGGTTCTATGTGTGAATTTATTATAGGTGCCAGTTGCCATTGGAGGCCCTGGCCTACATTCTGGGGTGAGATTCCGCAACGACGTGCAGACCCCTGGCCTCGCCAACGTCGCCGCCACCGTGATGAACCTCCACGGGTTTGAGGCCCCTGCTGACTACGAGCCAACCCTAATTGAAGTAGTTGACAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017846

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017846&oldid=46602"