BGIOSGA017857

From RiceWiki
Revision as of 02:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017857| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017857, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA017857

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017857, complete gene.

LocusTag

OSJNBA0018K15.16

Ensembl Transcript ID

BGIOSGA017857-TA

Ensembl Protein ID

BGIOSGA017857-PA

Length

1113

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25029360..25030472

Sequence Coding Region

25030355..25030472,25029360..25030240

Genome Context

<gbrowseImage1> name=IndicaChromosome05:25029360..25030472 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:25029360..25030472 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGTCGGAGGAGGTGAAAATGCGGTTCGGCCGGTGTCCGTACTGCCGCGCCATGATCTACCAGAACCCCAAGGCCGTCATCTTCTACTGCAGCAGATGCCGCACTCCGATCCGAGGCAAGAACCCGGAGCCGACGGATGAGGCGGAGTACGCGCTGAGCAGGCTGGAGATCCTCTCCGCCGACACCGCGTCGGTGTTCTCCGACGAGCCGGAGGACGCCGGGTCGGACCGGCGCGCCGACGAGGTCCGGCCGTTGTCGAGGCGGACGAGGCGGCCGTCGAGCTCGTCTGACTGGACGACGACGACGGATTCGGAGCGGAGCGAGGAGGCGTTCTACACGCCAAGGAACGCGCAGGAGGGGCGGCCATGGCAGTCGCCGTCGCCGGTGAGCTCGCAGGAGCTCGGGGCGTCCGGTGGTGGTGGTGGCTTGCCTCGACCTCCCGATGAGCCAGGCGCCGTCGCGGCGGCGCGCCTGATGGACCCGGCGTTTCACAAGGAGCTCCTCCACGCGCTGGACAACCTCCGCAGCTTGATCGTCACCATCGAGCAGCCGCGCCCGGCGAGCGGCGGCGGCGGGAGGGCCCTGACGCGGCGCGATTCGCGGCTCTTCCGCCGGCTGGAGTCGCAGCTGGAGCGGGCGCTTCCGCCGCAGGACACCGCTTCCACGTCGGCGTCGTCATCCAGCTGCCGCGGCGACGGCGGCGGCGGGCGTCCGTCGGCGCCCGCGCGGCGGGAGGGCACCGACCCCTGCCGCCCGGTCCTGGGCGGCGCGCCATTCGTGATCTGCGGCAAGTGCTCGGAGCTTCTGCGGACGCCGCCGCCGCCGCGGCCACGGAGGAGGAGGTGGACCACCAGGATACGGTGCGGCGAGTGCAACGAAGTGCTCGAGCTGTCCCTTCCCGCCGGCGGCGTCCCGGCTCAGCACCGGCCGATCAGGACGTGCTCGGCGCCGCTGGTCTCCGACCACCACCGGCCACTGCCACGACGGCTGGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MQSEEVKMRFGRCPYCRAMIYQNPKAVIFYCSRCRTPIRGKNPEPTDEAEYALSRLEILSADTASVFSDEPEDAGSDRRADEVRPLSRRTRRPSSSSDWTTTTDSERSEEAFYTPRNAQEGRPWQSPSPVSSQELGASGGGGGLPRPPDEPGAVAAARLMDPAFHKELLHALDNLRSLIVTIEQPRPASGGGGRALTRRDSRLFRRLESQLERALPPQDTASTSASSSSCRGDGGGGRPSAPARREGTDPCRPVLGGAPFVICGKCSELLRTPPPPRPRRRRWTTRIRCGECNEVLELSLPAGGVPAQHRPIRTCSAPLVSDHHRPLPRRLE</aaseq>

Gene Sequence

<dnaseqindica>1..118#233..1113#ATGCAGTCGGAGGAGGTGAAAATGCGGTTCGGCCGGTGTCCGTACTGCCGCGCCATGATCTACCAGAACCCCAAGGCCGTCATCTTCTACTGCAGCAGATGCCGCACTCCGATCCGAGGTGCCTCGCCCGCCATGGAATCTCAGCTGTGCTTGATTAGTCGCCATGGATCTGACGCCCAGAAGCTGTGGTGTTTCTTGGTGTTTTTTTTTTTTTTTTTTGCTGTCTCCGCAGGCAAGAACCCGGAGCCGACGGATGAGGCGGAGTACGCGCTGAGCAGGCTGGAGATCCTCTCCGCCGACACCGCGTCGGTGTTCTCCGACGAGCCGGAGGACGCCGGGTCGGACCGGCGCGCCGACGAGGTCCGGCCGTTGTCGAGGCGGACGAGGCGGCCGTCGAGCTCGTCTGACTGGACGACGACGACGGATTCGGAGCGGAGCGAGGAGGCGTTCTACACGCCAAGGAACGCGCAGGAGGGGCGGCCATGGCAGTCGCCGTCGCCGGTGAGCTCGCAGGAGCTCGGGGCGTCCGGTGGTGGTGGTGGCTTGCCTCGACCTCCCGATGAGCCAGGCGCCGTCGCGGCGGCGCGCCTGATGGACCCGGCGTTTCACAAGGAGCTCCTCCACGCGCTGGACAACCTCCGCAGCTTGATCGTCACCATCGAGCAGCCGCGCCCGGCGAGCGGCGGCGGCGGGAGGGCCCTGACGCGGCGCGATTCGCGGCTCTTCCGCCGGCTGGAGTCGCAGCTGGAGCGGGCGCTTCCGCCGCAGGACACCGCTTCCACGTCGGCGTCGTCATCCAGCTGCCGCGGCGACGGCGGCGGCGGGCGTCCGTCGGCGCCCGCGCGGCGGGAGGGCACCGACCCCTGCCGCCCGGTCCTGGGCGGCGCGCCATTCGTGATCTGCGGCAAGTGCTCGGAGCTTCTGCGGACGCCGCCGCCGCCGCGGCCACGGAGGAGGAGGTGGACCACCAGGATACGGTGCGGCGAGTGCAACGAAGTGCTCGAGCTGTCCCTTCCCGCCGGCGGCGTCCCGGCTCAGCACCGGCCGATCAGGACGTGCTCGGCGCCGCTGGTCTCCGACCACCACCGGCCACTGCCACGACGGCTGGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017857