BGIOSGA017880

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Revision as of 02:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017880| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017880, complete gene.| tag = P0015C0...")
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Gene Name

BGIOSGA017880

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017880, complete gene.

LocusTag

P0015C02.12

Ensembl Transcript ID

BGIOSGA017880-TA

Ensembl Protein ID

BGIOSGA017880-PA

Length

5250

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24651382..24656631

Sequence Coding Region

24656579..24656631,24656193..24656263,24654518..24654643,24653733..24653945,24653622..24653654
,24653470..24653543,24653115..24653377,24652843..24652911,24652127..24652185
,24651928..24652032,24651382..24651518

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24651382..24656631 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24651382..24656631 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCGTGTGGCCTGTGGGAAAAGCCCATCTCAATCTAGCCCGATCCACCTGTCTCCAAACTCCGGCTCCCCGCTGCGGCGCTCCACCTCCGACTCCGATTGGCGATTGGACAACACTGAAGTCGGACTAGCCAACGAAAAATTCCTAGCTACTCCAATAGCCCACTTCAAGATAGCAATTAGTGTTGGCCCAGGGCTCGGCAAAATCCTGGGTCCGCCAGTGAGCCTCCTAGCTCTTCCTCAGGGAGGCATGTCAACTATTTCCGATCAGAAGAAACGGACCTTAGAAGCCCTTCAACAACGTTATGCTGCTGCAAAAGCTAAGAAACTGCAAGACAAGCCTAGGTGTCAGACAAGGAATAAAGATAGTGCGCCCAAGCCCAATCTTGATGCATCAAGGAAAGGCAAAGCTCCAGATTTCATTCCATCTCGAACTTCTGCTCCGTTTCCTTCAAAAAAAGGTCTAGCAATCTCCAGTTCTTCTGCTTCCTCAGGTGGAGAAACCAATCCTGTATACTCTGAACTTTCATTTGCTCCACATGATAATTTGCTCCAAAGAAGCATTTCGGATTTGGACAGTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAAAAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGATAACTATGTTCACAGGGGTCCTAGATTAGTTGATGCACAGGCAAAATCTTTGTTAATTCATTCAAAGCGATCAAAAAGGCACATGTCACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTGAGACACTCCGCAAGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCACAGAGCTTACCAAAAGCACACCGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATCTTCATGGGGCTCTTGTAATAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTATGCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCTTCCGAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCACGCTGATCGGTGACAAACTATCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGCGAGTGCAGGCACAGATCAGATAG</cdnaseq>

Protein Sequence

<aaseq>MGRVACGKSPSQSSPIHLSPNSGSPLRRSTSDSDWRLDNTEVGLANEKFLATPIAHFKIAISVGPGLGKILGPPVSLLALPQGGMSTISDQKKRTLEALQQRYAAAKAKKLQDKPRCQTRNKDSAPKPNLDASRKGKAPDFIPSRTSAPFPSKKGLAISSSSASSGGETNPVYSELSFAPHDNLLQRSISDLDSMDVVHNVVYDIIQKGGDAGKITKGAKKLKLEKGILLDNYVHRGPRLVDAQAKSLLIHSKRSKRHMSLKQHKKCGSFDLPETLRKFDLYKPMHEMWKEYITELTKSTPKKQLSETLLSADLHGALVIVAECKSASSYQGVCGIMIRDTAETFGIISDDNRFRVVPKAGSVFILQADCWKVTLIGDKLSPREKLKENQRQQRVQAQIR</aaseq>

Gene Sequence

<dnaseqindica>1..53#369..439#1989..2114#2687..2899#2978..3010#3089..3162#3255..3517#3721..3789#4447..4505#4600..4704#5114..5250#ATGGGCCGTGTGGCCTGTGGGAAAAGCCCATCTCAATCTAGCCCGATCCACCTGTGAGTCTGTGACCTCGATCCAGCGCTAGGGCTGTCATTCTGGCAAGCGGCAACGGCGGCAGTGCTGGTTGCCTCCTCCGCACGCGCAACGGCGCGACCGGCGACTCTCCTCGCCGCCGGCCACCGGTCGCCTGGCCCGCCTCTCGCGCCCCGCCAGCCACCGCATCGGCGCAGATCGACGGACGCCGAGACGCGCAGCCGCAGTCGCGCAGAGGCGCCGAGTGCCTGAGGGCTCAGCCAGCCGCCGACCGCCGCGGCCGCCTGGCCCCCCTGCCCGTCTCGTCTTCTCCAGTCTCCTCCAATCCTTCGTGGCAGGTCTCCAAACTCCGGCTCCCCGCTGCGGCGCTCCACCTCCGACTCCGATTGGCGATTGGACAACACTGAAGGTCAGTGACTCTGTGACGTAACTCAATAACTTTGCCTCACTGCTTATTGTCATGGCTAATTAGTTAGCTCATAGCTTAGGTTGCCAATTTGTGATTTGTGAATGGCTGAATGGGAATAAATCGCTGCTGTTATTGTAGGATTGGAATTAGCTTATTGGGTGAAACATAAAGAGGATTGGGGATTGGTATTGACCTATTGTAATATTTGCTCATTTTGAACTTGCTTGTTAAATTAGTCGGCTATTGATGTTATAAGATACTATTGTTATATATGTGTCGCCTTTTATTCAAATTTGTACTTGTATATGGGATTTGCTGTGTTTAAAAAATTTGGTAAGTGATTTGAACTATTGAAGTCGGACTAGCCAAGAAAAATTCCTAGCTACACCAATAGCCCACTTCAAGATAGCAATTAGTCTTGGCCTGGGGTTCGGCAAAATCCTGGGACCAGGGCGGAGGGCTCAGTAGGGCGAGGTGTGGCGCTCGCCGTACCTCGTGCCGCCTGCTGACCACCCCCCCTTCCCCCTTCCTTGTACTCCTCCGCGCAGAGCAACAACCGGGTCAGAGAGAATGGCGACGCAGCATCGTGAGAAGACGAGCGACGGCCGAGACGTGCTGTGGACGCGTCCGCGTGTGCCAGTGCTGGTCCTCACACTGATAGCTAGTAGGTCCATTAGGCTTGTTTAGTGTAAATGCGGCCTGTCTTGTTTTGTCTCTTGAATCATCTCCTCCACCCTCCCCCAATCCATCAATCCCCTTCCCCAATCCCCATCAGTGGACGGCGGCTGCTGCGGTGCGCGCCACGCGCTGGAGAGCTGGGTGAGGTGTGGAGGGCGTGGCTGCCAGGCTTCCGGCCTCCAGGGCGCAAAGCTGCGGCTGCGGCATCCTCTCCAACCAGGCGGCAGCGCGACCAGCCGCCAGGGACCAGGGGGGCCTGCGAGCAGGGTGGGACGAAGGGCACAACATCTGTGCAGGCGTGCAGCACCAAGCAGTGACAGCAAGCAAGCCAACTAGCCAAGTATCCATCACTCCATCAACAGATTCTACATATGTGAACACTAATCAATCTTTGGTACTAGTTGTTTTGTAGATTCCACATATATATCTATCCATTCTTAGTACTGTAGTTCCTATATGTGATGTGTTGTTGAAAACATGAATCTTGAGAAGATGAGATATTTTCTGAGTACCTATTCTTCTATCTACACTTGTTTGCAAATGGATGATGAATCATGAACTTGTGAGTAGTTCTTGTTTGCCATGCTTAATGTAGACTTATTGAGATGATATTGTGTCGTATAATGACGTGCATTGAGATTTTTCGTTCTGTGCTAACTTCCGTGGTAATTCATAGGCCACACCTAAATTTTTTTCCTTCCTCCGGCACTGGTGGTAATATTTGCTCATTTTGAACTTGCTTGTTAAATTAGTTGGCTATGATGTTATAAGATACTATTGTTATATCTGTGACGCCTTTTATTCAAATTTGTACTTGTATATGGGATTTGCAGTGTTTAGAAATTTTGATTAGTGATGTGAACTTTTGAAGTCGGACTAGCCAACGAAAAATTCCTAGCTACTCCAATAGCCCACTTCAAGATAGCAATTAGTGTTGGCCCAGGGCTCGGCAAAATCCTGGGTCCGCCAGTGAGCCTCCTAGCTCTTCCTCAGGGAGGTCTGCACCGAGGGCTGCCTCGGCTTGGAGGTCTCTTCTTGCCAAGCTGCTGCAAGCTGGCAAGGTAAGTTCCTTTGCAGAATCAATGTGCCACCGGAGGGAGGGGGAATGAGGGGCTTGGGGCTGGCCAGTCACAGGGCATAGGGAGGTCTGCGGCCTGCTGGCCAGGGGGAGAGGATCTCACCGGCATCCAGCCCTGCTGGAGAGAGGGATGAGAGAACTTCTGGAGTGGGATGATGGAAAGAGAGGAAGAAGGTCATAGGGGCAATTTAATCAACCAATTTAGCTTCGTAGTGGCATGTTTCAAAATAATTCCACTTTGGAGTGGCATATTTCTAAGTCCAAACTTTCAAGTGGCATGTATCTTAAGTGCAAACCTTGCATTCTATGCATCAATTTATTTCCTATCATCGTCTAGAGTCTGCTGCTTGTTACTTATTTTTGTTGGTTTGCAGAATTATCAAACTTGTGGTATGGAAGGCGATTCCTTTCTTATATGTTCATTTGCCTTGTGAACTGAGATTCCTCTCATTCGTGTTGAACTGTTGATTAACCACAGATCTTTCTTATAGGCATGTCAACTATTTCCGATCAGAAGAAACGGACCTTAGAAGCCCTTCAACAACGTTATGCTGCTGCAAAAGCTAAGAAACTGCAAGACAAGCCTAGGTGTCAGACAAGGAATAAAGATAGTGCGCCCAAGCCCAATCTTGATGCATCAAGGAAAGGCAAAGCTCCAGATTTCATTCCATCTCGAACTTCTGCTCCGTTTCCTTCAAAAAAAGGTTTAATGTTGCCCATCATTCTTTTGATGCAGTTTTTTTTTTTCTGGCCATTTTTTCTAAAACTGCTTCTGATCTCAGGTCTAGCAATCTCCAGTTCTTCTGCTTCCTCAGGTGCCTTCTTAGGCTCTAACATACATAGATCTGTGAGTTCTGTGTGTGGCTGTTTGACATGTACATTTAACTTTGTAGGTGGAGAAACCAATCCTGTATACTCTGAACTTTCATTTGCTCCACATGATAATTTGCTCCAAAGAAGCATTTCGGTACCTATTCTCCGTGTGTGGGTTTCAAAAATTAAATTTAGGCATGAGGAAATAACTTATGATATTTATTGTAGTGTACTTCATTGTTGTAGGATTTGGACAGTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAAAAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGATAACTATGTTCACAGGGGTCCTAGATTAGTTGATGCACAGGCAAAATCTTTGTTAATTCATTCAAAGCGATCAAAAAGGCACATGTCACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTGAGACACTCCGCAAGTAAGTCTTGTTCCGAATAAGTGCATAGATTGACTCCTTTTCTTGTCCTCAGTCATAATTTCCTTATCATGGTTTTCTTTTGATAAAATGGAATCCCTTTAGGGTAATGATTAAACTACACTTTACATGTTTGATTGAATCTTCACATAATATAGTACCTTTGGACATTATGTACTTTTTACATATGTGGCTTGCCCTTGCAGGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCACAGAGCTTACCAAAAGCACACCGTATGGATTCCACCATCTTTTTGGTTATGTTATTACTGTTCTCACCTTCTGGTTCTTTACTTATTGCTTGGGGCATAAAGTTTATTCTGTTATATACTAAAACTGCAGTAAAAGCGAAAAAACATTAAGTGCACAAATGTTGGGTTCTGCTGCTACCAGTCTCTCGATGTTAGCTTCTAACCTCACTGACCTTTGGCTGCTTGTGCTTTCTTTGATAGAATTAGCTGATAGGTTTACTAATTTGATTCTAACCTTTTGAACTCAAGTTTTTCAATAAGAACTATATGCTATAATAAAATTTAGTCCACCCAAACTGCTTATGTACAGAAACTTCCTTGACTGTAGGGACTAAATCTTTTGGTATGCATATCAAATTATTGCTGAAATCAGGTTCATTTTATGGAAGTGGACTACACAAAGTTCTCAGAGATTAAATGAATATACCATTTTTAGCTCTGAATTATTAACACATTCAAAGAGTTGGATAAATCAACAAATGCAATAATGATTTCAACAGCTTAGATAAAACAATAGAGTAAGGGATCAATTCCTCCTTTTTCCAGAACTTCGTTATGACCCTTTTATTATGACCTTTCTATACCATATATGAGTTATTTAATCACAAAAAAGTATTTATGTGTACTGCCTTTTCTGCAGGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATCTTCATGGGGCTCTTGTAATAGGTGATTTATATGCTTAAGATGAGCTGCGTATTCAATTGCTTTCTTGTTTCTGTTAGTTTTATCATCATTTCTTATGGTTTTGTGGCTTTTGCAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTATGCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCTTCCGAGGTAATTCTTCAAATTCCTGGTGCAATATTTAACCGCGTATATAGGATGAATGCTATTTTCCTCAAGTCAGTGTCTGTTTCAATCATATAAATACGGTTACATAGTTCTTACGCAGCTCTTTTCCTCCATATTATGCTCATTGAGCTGTCAACTGAAAATAATGTGAGATAGCATAATAAATTTACAGTAGGAAGGTGCTCTGTTATGAAAGCTTATGTGTTGCTCTGAGGGCTACGCACTTGAAATTTCCATCCAGCAACCTGAACGCTTCTTGCTCGAGACACCTGAAATACTCTTGTCAGTCAGTCCATCGGCTGGTGTTATCAATCTCTGTTTGCATGGAGACATTCGATTCTATAGATATTATCTGCATATCTTTGTGGCTTAATTACAAAGTTTGAACCTGCAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCACGCTGATCGGTGACAAACTATCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGCGAGTGCAGGCACAGATCAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017880

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017880&oldid=46636"