BGIOSGA017892

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Revision as of 02:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017892| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017892, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017892

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017892, complete gene.

LocusTag

OSJNBA0009E21.9

Ensembl Transcript ID

BGIOSGA017892-TA

Ensembl Protein ID

BGIOSGA017892-PA

Length

2731

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24346147..24348877

Sequence Coding Region

24348784..24348877,24346147..24348662

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24346147..24348877 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24346147..24348877 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTCAGCGCGCGGCGAGCAACGCCTACTCCTGGTGGTGGGCGTCGCACATCCGCACCACCCAGTCCAAGTGGCTCGACACCACCCTCCACGAGATGGAGGACAGGGTGAAGGCCATGCTCAACCTCATCGGAGCGGACGGCGACTCGTTCGGCAAGAAGGCGGAGCTCTACTTCAAGAGCCGGCCCGAGCTCATCAACCACGTCGAGGAGATGTTCAGGTCCTACCAGGCGCTGGCTGACCGCTATGACCGGATATCCAGCGAGCTGCACAAGGCCAACCACACCATTGCCACAGCGTTCCCGGACCAGATCCAATTCTCCATGCAAGATGCCGATGGGGAAGGATTCCAGAAGGCGATATCCGGGATCGATCTCAGCAACTTCAAATTTCCTGCGTTGGAAGGTTTGCCAATGGGGTCACGCGGCGCTAGCCGGGGAACCAGCCCGGTCCCGAAGAGGACCCAGATGCACCGGAGGATCACCTCCCACATGAACAAGGAAAATGCACAGGAGGAGATCGACAAGCTGCAAAAGCAAATCCTGGTGCTGCAGACTGAGAAGGAGTTCTTGAAGACCTCTTATGACAGCGCGCTGGGCAGGTATCTGGACATTGAGAAGCAGGTGGTGGAGTTGCAGGATGAAGTTTGCAGCTTGCAGGATGCTTTTAGCACTGGCGCGGCCATTGAAGACAATGAAGCCCGGGCATTGATGGCTGCACGAGCCATTGTGTCTTGCGAGGATACATTGGTTAATTTACAGGACCAGCAACGTAGATCATCTGAAGAGGCAAGAACTGAGTTTAAACGATTCATTGAAGCAAAGAAGAAGCTTGATACCTTCAAAGCTGAGTGTGGGCAGCCTCATACGCAAAATGATGAACCTGATAACAGTGACAAAGAATACATCCATGCAATGCCATCTGGGGATGTTGATGATTCTGTTCAGAATGAGATCAGGTTTGACCTGCAGGAAGTATGCCAAAAGGTCAAAGAACTAATTGAATTGCACCCAGGGGTATCGGTCACTGATTTAGCAGATAAGGTTGACCGACTTGTGGAGAAGGTAATCGACCTAGAGCTTACTACCACTTCACAGAATGCTCAGATCAATAGAATGAAGACTGAGATAGACGACCTTCACAAGCGCCTGCAAGCCTTGGAGGAAGAGAAGTCGGCTTTGGTTGCTGATTCCAGTAAGCTGGTAGACAGATTGAAGCAAATTGAAGAGGTTTTGCAAGCAGTCCAACATCTTGGAAACTCCATACAAAATGGGACACAGAATATTCATAAAGAAATGAATGCAGCCTGCAGTGAACTTGCTGAATTTGTAGAAAAATTACATGAACCTGAGCCCCAAAACAATGGTTTCATGAATTCATCCCAAGAGTCAAGTTGTCAAGAAGAAGATTCAGAGGTAACAAGTCAGTATGCCAAGAAACAAACATCCGACTCAATAGATGGTTCAAAGAATGAAGTGGAGAAACAAGATAAAGGCTCCGAGGGTCCTTTGGTGCAGCAACATCCTGACACAAATGGATCTGATGGTGAGGACAAGATTTTATTAGAGGGGTATGCATCTGTCCTTCAGAGCTACAAGGGTACAGAGCAAAAGCTGTCAGAAATTGAGAAGACAAATCAAGAGTACCATTCAAGGTCAATGTCAGAGCTGAAGGATCTGAAGAGTGCCAATGCAATGAAAGATGAGGAGATTCACTCTCTTCGGCGCATGCTAAGTTCTTTGCAGAGAAAGATGAATGCCCCTGCTCCTGAGAATGTGGACAAGTCTGAAGAAACTTCCAAAATAAGCACCACTCCTGTCACCGAAGACAAAGAGATTGCAGAAATAGAGGAGTACATGAAGCAATGCCAAGTTGAAGAGCAACTTGCTTCGTCAATTTCCGAGGAAAAATTTAGAGCAGAGATTGACAGGGTGTTGGAGAATAACTTGGGGTTTTGGTTGAGGTTTAGCACATCATATCATCAAATACGGAATTTCCAAACATCATTTGACAAGCTAAAAACTGAGATGGATAAATTGATTGATGCACAGGCACAGTGTGGTGCAGATGGAGTTCCTATCAGTTATCAGGTAGCAAAGCTGGAGTCAGCTGTTCTAGAAAAAAAATTCCGGGATTTGAACACAGATCTTCAAGTTTGGATAGAAAAAAATGTGCTATTAAAAGGAGAACTAGAGAACAGGTTCTCATCACTCTGTGGCATACAAGAGGAGATATCAAAGATCGCAACTCTGGATAAAAGCGATGAAGTTCACTTCACCCCTTTCCAAGCTGCAAAACTCCAAGGAGAGGTGCTTAATATGAAACAAGAGAATAACAAAGTCGCTAAAGAGCTAGAAGCTGGGCTGGACCATGTAAGAGGTCTCCAAGTGGAGGTTGGCAGGGTGCTCTTGAAGCTCCGAGAAAATCTTGAATTATCTATAGCAAGAAGCAACCGAGCTCAGCAAAACTTCCGTAACCTGTCAACGAAAGCTGGAGTTCCCCTTAGAACTTTCCTGTTCGGCACGAAGCCAAAGAAACCATCACTCTTTTCATGCATGGGTCCTGGGGTGCATAAGCATCACAGTGGCTCAAGGGCTGGTCGTAGATGA</cdnaseq>

Protein Sequence

<aaseq>MLQRAASNAYSWWWASHIRTTQSKWLDTTLHEMEDRVKAMLNLIGADGDSFGKKAELYFKSRPELINHVEEMFRSYQALADRYDRISSELHKANHTIATAFPDQIQFSMQDADGEGFQKAISGIDLSNFKFPALEGLPMGSRGASRGTSPVPKRTQMHRRITSHMNKENAQEEIDKLQKQILVLQTEKEFLKTSYDSALGRYLDIEKQVVELQDEVCSLQDAFSTGAAIEDNEARALMAARAIVSCEDTLVNLQDQQRRSSEEARTEFKRFIEAKKKLDTFKAECGQPHTQNDEPDNSDKEYIHAMPSGDVDDSVQNEIRFDLQEVCQKVKELIELHPGVSVTDLADKVDRLVEKVIDLELTTTSQNAQINRMKTEIDDLHKRLQALEEEKSALVADSSKLVDRLKQIEEVLQAVQHLGNSIQNGTQNIHKEMNAACSELAEFVEKLHEPEPQNNGFMNSSQESSCQEEDSEVTSQYAKKQTSDSIDGSKNEVEKQDKGSEGPLVQQHPDTNGSDGEDKILLEGYASVLQSYKGTEQKLSEIEKTNQEYHSRSMSELKDLKSANAMKDEEIHSLRRMLSSLQRKMNAPAPENVDKSEETSKISTTPVTEDKEIAEIEEYMKQCQVEEQLASSISEEKFRAEIDRVLENNLGFWLRFSTSYHQIRNFQTSFDKLKTEMDKLIDAQAQCGADGVPISYQVAKLESAVLEKKFRDLNTDLQVWIEKNVLLKGELENRFSSLCGIQEEISKIATLDKSDEVHFTPFQAAKLQGEVLNMKQENNKVAKELEAGLDHVRGLQVEVGRVLLKLRENLELSIARSNRAQQNFRNLSTKAGVPLRTFLFGTKPKKPSLFSCMGPGVHKHHSGSRAGRR</aaseq>

Gene Sequence

<dnaseqindica>1..94#216..2731#ATGCTTCAGCGCGCGGCGAGCAACGCCTACTCCTGGTGGTGGGCGTCGCACATCCGCACCACCCAGTCCAAGTGGCTCGACACCACCCTCCACGGTACTCGTCTCGTTCACCCCCCGCGTGTTCGGCGAAATGCGCGTTTGCAGAATCTTCCGGTCATGTTGGTGACGGTGGCGTGTTTGGGTTAATTTGTTTCTCTCTGTGTGTGTGTATGCAGAGATGGAGGACAGGGTGAAGGCCATGCTCAACCTCATCGGAGCGGACGGCGACTCGTTCGGCAAGAAGGCGGAGCTCTACTTCAAGAGCCGGCCCGAGCTCATCAACCACGTCGAGGAGATGTTCAGGTCCTACCAGGCGCTGGCTGACCGCTATGACCGGATATCCAGCGAGCTGCACAAGGCCAACCACACCATTGCCACAGCGTTCCCGGACCAGATCCAATTCTCCATGCAAGATGCCGATGGGGAAGGATTCCAGAAGGCGATATCCGGGATCGATCTCAGCAACTTCAAATTTCCTGCGTTGGAAGGTTTGCCAATGGGGTCACGCGGCGCTAGCCGGGGAACCAGCCCGGTCCCGAAGAGGACCCAGATGCACCGGAGGATCACCTCCCACATGAACAAGGAAAATGCACAGGAGGAGATCGACAAGCTGCAAAAGCAAATCCTGGTGCTGCAGACTGAGAAGGAGTTCTTGAAGACCTCTTATGACAGCGCGCTGGGCAGGTATCTGGACATTGAGAAGCAGGTGGTGGAGTTGCAGGATGAAGTTTGCAGCTTGCAGGATGCTTTTAGCACTGGCGCGGCCATTGAAGACAATGAAGCCCGGGCATTGATGGCTGCACGAGCCATTGTGTCTTGCGAGGATACATTGGTTAATTTACAGGACCAGCAACGTAGATCATCTGAAGAGGCAAGAACTGAGTTTAAACGATTCATTGAAGCAAAGAAGAAGCTTGATACCTTCAAAGCTGAGTGTGGGCAGCCTCATACGCAAAATGATGAACCTGATAACAGTGACAAAGAATACATCCATGCAATGCCATCTGGGGATGTTGATGATTCTGTTCAGAATGAGATCAGGTTTGACCTGCAGGAAGTATGCCAAAAGGTCAAAGAACTAATTGAATTGCACCCAGGGGTATCGGTCACTGATTTAGCAGATAAGGTTGACCGACTTGTGGAGAAGGTAATCGACCTAGAGCTTACTACCACTTCACAGAATGCTCAGATCAATAGAATGAAGACTGAGATAGACGACCTTCACAAGCGCCTGCAAGCCTTGGAGGAAGAGAAGTCGGCTTTGGTTGCTGATTCCAGTAAGCTGGTAGACAGATTGAAGCAAATTGAAGAGGTTTTGCAAGCAGTCCAACATCTTGGAAACTCCATACAAAATGGGACACAGAATATTCATAAAGAAATGAATGCAGCCTGCAGTGAACTTGCTGAATTTGTAGAAAAATTACATGAACCTGAGCCCCAAAACAATGGTTTCATGAATTCATCCCAAGAGTCAAGTTGTCAAGAAGAAGATTCAGAGGTAACAAGTCAGTATGCCAAGAAACAAACATCCGACTCAATAGATGGTTCAAAGAATGAAGTGGAGAAACAAGATAAAGGCTCCGAGGGTCCTTTGGTGCAGCAACATCCTGACACAAATGGATCTGATGGTGAGGACAAGATTTTATTAGAGGGGTATGCATCTGTCCTTCAGAGCTACAAGGGTACAGAGCAAAAGCTGTCAGAAATTGAGAAGACAAATCAAGAGTACCATTCAAGGTCAATGTCAGAGCTGAAGGATCTGAAGAGTGCCAATGCAATGAAAGATGAGGAGATTCACTCTCTTCGGCGCATGCTAAGTTCTTTGCAGAGAAAGATGAATGCCCCTGCTCCTGAGAATGTGGACAAGTCTGAAGAAACTTCCAAAATAAGCACCACTCCTGTCACCGAAGACAAAGAGATTGCAGAAATAGAGGAGTACATGAAGCAATGCCAAGTTGAAGAGCAACTTGCTTCGTCAATTTCCGAGGAAAAATTTAGAGCAGAGATTGACAGGGTGTTGGAGAATAACTTGGGGTTTTGGTTGAGGTTTAGCACATCATATCATCAAATACGGAATTTCCAAACATCATTTGACAAGCTAAAAACTGAGATGGATAAATTGATTGATGCACAGGCACAGTGTGGTGCAGATGGAGTTCCTATCAGTTATCAGGTAGCAAAGCTGGAGTCAGCTGTTCTAGAAAAAAAATTCCGGGATTTGAACACAGATCTTCAAGTTTGGATAGAAAAAAATGTGCTATTAAAAGGAGAACTAGAGAACAGGTTCTCATCACTCTGTGGCATACAAGAGGAGATATCAAAGATCGCAACTCTGGATAAAAGCGATGAAGTTCACTTCACCCCTTTCCAAGCTGCAAAACTCCAAGGAGAGGTGCTTAATATGAAACAAGAGAATAACAAAGTCGCTAAAGAGCTAGAAGCTGGGCTGGACCATGTAAGAGGTCTCCAAGTGGAGGTTGGCAGGGTGCTCTTGAAGCTCCGAGAAAATCTTGAATTATCTATAGCAAGAAGCAACCGAGCTCAGCAAAACTTCCGTAACCTGTCAACGAAAGCTGGAGTTCCCCTTAGAACTTTCCTGTTCGGCACGAAGCCAAAGAAACCATCACTCTTTTCATGCATGGGTCCTGGGGTGCATAAGCATCACAGTGGCTCAAGGGCTGGTCGTAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017892

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017892&oldid=46648"