BGIOSGA017895

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Revision as of 02:26, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017895| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017895, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017895

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017895, complete gene.

LocusTag

OSJNBA0009E21.5

Ensembl Transcript ID

BGIOSGA017895-TA

Ensembl Protein ID

BGIOSGA017895-PA

Length

6480

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:24297545..24304024

Sequence Coding Region

24303981..24304024,24303355..24303424,24302777..24303268,24302507..24302680,24302253..24302366
,24302047..24302105,24301875..24301941,24301709..24301760,24301513..24301605
,24300757..24300840,24300241..24300653,24299961..24300022,24299658..24299727
,24299254..24299334,24299076..24299177,24298458..24298594,24298034..24298151
,24297545..24297805

Genome Context

<gbrowseImage1> name=IndicaChromosome05:24297545..24304024 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:24297545..24304024 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCGAAGAGCCTCCCGTTCATCGCCTTCGAGCACAAGCGGGATGCCTATGGCTTCGCAGTTCGGCCCCAACACTTGCAGCGTTACAAGGAGTATGCAGGCATCTACAAGGAGGAGGAAGAGGAGAGATCCGATAGATGGAAGAATTTTCTGGAGAGGCAGTCAGAACCATCGGGACAGGAAGAGAAGGGTGAAGCTGCCGGGCGTGTTGTGGATAGCAGTGGAATTGGCGGTTCTTCGTTGCTGCGGGAGAAGATTGTGCAAGGACCACACAAGATCGAGATATGGAAGCCAATCAGACCATCCCTGGGCAACATAGAGCAGATCATGAGTGTACGTGTCGAGGAGAAGCAATCACCTGCTTCTGGTAATCAGGACACGAAGGATGTCATCCATCCGGTGAAGGTTCAAGAGGGCAAGTTATCTGAGGATTCAGATGATGAGTTCTATGATGTAGACAAGGTTGAGACTAGTCAAGAAATGCATTCAAGTGATAGTGCGAATACTGGCATTGACAACAGGGGTCAAGAGGAAAATTTTCCTTCAATGGAAGAGTTGGAGTGTCTAGTCCATGGTGGACTGCCAATGGCTTTGAGAGGAGAGCTATGGCAAGCTTTTGTTGGCATTGGAGCGCGTAGGGTAAAAGGGTACTATGATAGTCTCCTTGTGGCAGAAGGTGAACTAGAAGATACCAGTGGTTCGCGTTCTTCAACCTCGGATGTTGCCGGGGAAAATACTGAAGTATCTTCTGAAAAGTGGAAAGGGCAAATAGAGAAGGACTTGCCTAGAACTTTTCCAGGTCATCCTGCTTTAGACGAGGATGGAAGAAATGCTTTGAGACGTTTGCTTCTAGCTTATGCTAGACACAATCCAGCAGTTGGTTACTGCCAGGCAATGAACTTCTTTGCTGGTCTCTTACTTCTATTGATGCCAGAAGAGAATGCATTTTGGACATTGGTAGGAATTATCGACGACTATTTTGATGGATACTTTTCTGAAGAAATGATTGAGTCGCAGGTGGATCAGCTTGTTTTAGAGGAGTTGGTACGAGAAAAATTCCCAAAACTAGCAAATCACCTGGATTACCTTGGTCTTCAAGTTGCATGGGTTACTGGACCATGGTTCCTATCCATTTTCACCAATGTGCTTCCTTGGGAGAGTGTTCTCCGTGTCTGGGATGTCCTTCTGTTTGATGGGAATCGTGTGATGCTATTCCGGACAGCTCTTGCACTACTTGAGTTTTATGGTCCTGCACTTGTGACCACAAAAGATGCCGGTGATGCAGTTACACTTTTGCAGTCTTTAGCTGGCTCCACTTTTGACAGCAGCCAGCTTGTCTTGACAGCTCGCATGGGATATCAGTCTGTAGATGAAACAGGATTGCAAGAGTTAAGGAATAAGCATCGGCCATCTGTTCTATCTTCAATGGAAGAAAGAGCAAAAGGTCTAGGTGCCTTGGACACCAACGGTCTTGCATCAAAGCTCTATAATTTCAAACATGATCCTGAACCACTGGTGTCAATAAGTGATTCGCAAGATCAGATGAGTGATGTGGGAGATGGGGATGCCAACCAAAGTGATTCTGGAAATATGGATGATATGTATGGCGGTCTGACAGTCAGTTCTGAGATTGAAGCTTTACCGGACCCAAAGGACCAGATCTCTTGGCTGAAGTTTGAATTATGCCGATTGCTAGAGGAGAGAAGGTCAGCTGTTCTCAGAGCTGATGAACTAGAGACGGCATTGATGGAAATGGTCAAGCAAGATAATAGGCGGCAATTAAGTGCAAAGGTTGAGCAGTCGGAACAAGAATTGTCTGAACTAAGACAAACCCTATTGGACAAGCAGGAACAAGAGCAAGCAATGTGTCAGGTACTGTTGCGAGTGGAACAAGAACTGAAAATTGCAGAGGAAGCACGCATCTCTGCTGAGCAGGATGCCGCAGCTCAGAGATACGCTGTTAATGTGCTGCAGGAAAAGTATGAGGAAGCTATGGCTTCACTCGCGAAAATGGAGAACAGGGCTGTAATGGCAGAGACAATGTTGGAGGCCACACTGCAGTATCAAACTAGCCAGCAGAAAGCTCTTCTTTCCCCCTTGCCTTCTCCAAGAACATCCATGATAGACGCATCCCCTGGTCGAGCAAACCATGATTCATCACAGGAGTTCCAGCCCAAAAAAATAAACTTGCTCTCACCATTTTCACTGAGTTGGCGCGATAAGAACAAGGGAAAGCAGAACAATGTTGATGACAGTGCCAAGCTTACTGATGCACATGATCAAAGGGAAGAAATAACCAACAACAAAGACGAGAAGCAGGTAGAAACACCAAAACTGGATGTGCTAGAAGAGTCTATGGGTTCACCCAAAGAAGATAACAAGTCGAGAGTAGAGGTGCCAAAGGAAGACAGCGATTTGGCAAGCGTCCAAGTAGTCGCAAATGATATGAATGGGCAGCATGAACAGTTGCAAGAAATAAAACTGGATTGA</cdnaseq>

Protein Sequence

<aaseq>MKPKSLPFIAFEHKRDAYGFAVRPQHLQRYKEYAGIYKEEEEERSDRWKNFLERQSEPSGQEEKGEAAGRVVDSSGIGGSSLLREKIVQGPHKIEIWKPIRPSLGNIEQIMSVRVEEKQSPASGNQDTKDVIHPVKVQEGKLSEDSDDEFYDVDKVETSQEMHSSDSANTGIDNRGQEENFPSMEELECLVHGGLPMALRGELWQAFVGIGARRVKGYYDSLLVAEGELEDTSGSRSSTSDVAGENTEVSSEKWKGQIEKDLPRTFPGHPALDEDGRNALRRLLLAYARHNPAVGYCQAMNFFAGLLLLLMPEENAFWTLVGIIDDYFDGYFSEEMIESQVDQLVLEELVREKFPKLANHLDYLGLQVAWVTGPWFLSIFTNVLPWESVLRVWDVLLFDGNRVMLFRTALALLEFYGPALVTTKDAGDAVTLLQSLAGSTFDSSQLVLTARMGYQSVDETGLQELRNKHRPSVLSSMEERAKGLGALDTNGLASKLYNFKHDPEPLVSISDSQDQMSDVGDGDANQSDSGNMDDMYGGLTVSSEIEALPDPKDQISWLKFELCRLLEERRSAVLRADELETALMEMVKQDNRRQLSAKVEQSEQELSELRQTLLDKQEQEQAMCQVLLRVEQELKIAEEARISAEQDAAAQRYAVNVLQEKYEEAMASLAKMENRAVMAETMLEATLQYQTSQQKALLSPLPSPRTSMIDASPGRANHDSSQEFQPKKINLLSPFSLSWRDKNKGKQNNVDDSAKLTDAHDQREEITNNKDEKQVETPKLDVLEESMGSPKEDNKSRVEVPKEDSDLASVQVVANDMNGQHEQLQEIKLD</aaseq>

Gene Sequence

<dnaseqindica>1..44#601..670#757..1248#1345..1518#1659..1772#1920..1978#2084..2150#2265..2316#2420..2512#3185..3268#3372..3784#4003..4064#4298..4367#4691..4771#4848..4949#5431..5567#5874..5991#6220..6480#ATGAAGCCGAAGAGCCTCCCGTTCATCGCCTTCGAGCACAAGCGGTGCGTTTCCTCTCTCGCCCGGGGTGGGGGGGGGGGGGGCGTGTTTCGAGTTTTGCCGTCTCCTTCCTCGTTGCGCCGCGTGGGTTTCGGCCGGTTGCTGTACGTCGCGTCGGTTTCTCCTCGGCGAGCCGCGACGAGGGGATCTCACTTTTTTTTTTCTTGCTGAGGTTTTCGGGTAATGCGGCGAGGGATTGGCTGTGCGCGGGAGCGGCGAGGGCTGGATCTCCTCCGCGCGAAGGAGTGTAGGGTTGAAGCATAGGATGGATTTGCCGGTGGAATTGCACGAGTTGAGAGCTCCGTGATGTTTGCTTTTTTTTTTTTTGGAAGAGATCTGGGTTTCGACGTCCGCATCCTGCTGCACGACAGTAGGAGCAAGCAGTTTCCACTGTTGATTCAGGCATTGAGTTGATAGGATTAAACCTGACGAAATTTGATCTCTGGTTTGAATCTAGGAGAGGGCACAACCGCACAAGTCTAGAATCATCGAAGTTCTATGCGGTAGCTAGTTGCCGTTTTGGAGAAATGTTCCCTTTCTGATGCTGTGTGATTGAAGCAGGGATGCCTATGGCTTCGCAGTTCGGCCCCAACACTTGCAGCGTTACAAGGAGTATGCAGGCATCTACAAGGTAGAAGACACGCGCCCCCTGACTTTTTTTTAATCTGCATTGTCTGGTGTGGACAAGCTACATGCCTTCTGGTGCTGTGTTTGCAGGAGGAGGAAGAGGAGAGATCCGATAGATGGAAGAATTTTCTGGAGAGGCAGTCAGAACCATCGGGACAGGAAGAGAAGGGTGAAGCTGCCGGGCGTGTTGTGGATAGCAGTGGAATTGGCGGTTCTTCGTTGCTGCGGGAGAAGATTGTGCAAGGACCACACAAGATCGAGATATGGAAGCCAATCAGACCATCCCTGGGCAACATAGAGCAGATCATGAGTGTACGTGTCGAGGAGAAGCAATCACCTGCTTCTGGTAATCAGGACACGAAGGATGTCATCCATCCGGTGAAGGTTCAAGAGGGCAAGTTATCTGAGGATTCAGATGATGAGTTCTATGATGTAGACAAGGTTGAGACTAGTCAAGAAATGCATTCAAGTGATAGTGCGAATACTGGCATTGACAACAGGGGTCAAGAGGAAAATTTTCCTTCAATGGAAGAGTTGGAGTGTCTAGTCCATGGTGGACTGCCAATGGCTTTGAGAGGAGAGGTGCAGCTTGTTTCATGGAACCTTTTTGCTTTGTTTCCTTTTCTAACTTTAGAATTCTTCAGTTCATTCAGCAGACTCTTGCTTTTGTGGTGACAGCTATGGCAAGCTTTTGTTGGCATTGGAGCGCGTAGGGTAAAAGGGTACTATGATAGTCTCCTTGTGGCAGAAGGTGAACTAGAAGATACCAGTGGTTCGCGTTCTTCAACCTCGGATGTTGCCGGGGAAAATACTGAAGTATCTTCTGAAAAGTGGAAAGGGCAAATAGAGAAGGTAGGTCACTGAGTCCAAATTTCCTTTTTTTTTTAATATAAAAAGCTAGTTTTATTGGAGGCTAGGATTTTTCTTATTTAGCGTTTTTATCTGGAAAGTCTGACAAGAAGCCGTATCTGCCATTTCTGGGCTCCTTACAGGACTTGCCTAGAACTTTTCCAGGTCATCCTGCTTTAGACGAGGATGGAAGAAATGCTTTGAGACGTTTGCTTCTAGCTTATGCTAGACACAATCCAGCAGTTGGTTACTGCCAGGTAAATGTGCCGTTACTGGTGATCCGCATTGTGTCCTTTATCTTGATGGAAGTCAGCTTCTTTGTAACTCTGTAGCAACAATTGATTCCAAGTGTTATGATAAAATAGTTTGAGTAACAATTGTACTTGGATATTGGTGAACTGTAGGCAATGAACTTCTTTGCTGGTCTCTTACTTCTATTGATGCCAGAAGAGAATGCATTTTGGTACACCCTCATGCCAAGTGTTGTACTATTTGTGTGTTTTCACTGATATAAAATATTGTGATAGTTGAATTAAATAATATTTTAAAGCTGTTGATGGTGTAACAGGACATTGGTAGGAATTATCGACGACTATTTTGATGGATACTTTTCTGAAGAAATGATTGAGTCGCAGGTATTGTGATGTTTCCATATCCAGGTTTCTGTTGGTTGCATGTTTGAGTGCTTGGAAGATGGAACTGCATGTTTGATTCAATCTTATGTGAAATGAACCTTGGGTTGTTTCCAGGTGGATCAGCTTGTTTTAGAGGAGTTGGTACGAGAAAAATTCCCAAAACTAGGTTCGCAACTTATTGCAAATATGATATATTGGTGTGGCGTGCCTCATTTAGCTAGTAACTTCAAAAATATAATAATTAAAAGCTGATTTCCTTTTTTGTGCAGCAAATCACCTGGATTACCTTGGTCTTCAAGTTGCATGGGTTACTGGACCATGGTTCCTATCCATTTTCACCAATGTGCTTCCTTGGGAGAGTGGTTAGATTTTTACCTTTGTTGTTCTTTCATGTTTGTTTCTTGTAGGAAACCCCATTTTTAATTTATACCTTAGCTAAGCCATTGGTGGAGATATAACAACTGGATATGTGCAAGTTGAAATTTTGTGTTTCTCTTAAATACTTGTGGAACTTGTTGTGTATCTTTCCAAAATGGTGTGAAACTATTGTAATTGATTGATTGTGGCTTTGTGTATCTTAGATGCGGTGGCCAGTTTATAATTATCTAAGAAAAGCCTACATAGTTACCTCCACAAAGCACATCGATACTACATTATCTTACTAGTATTTATTATTCCATTCTGACTTGCTGGATATGTGAACTATTCTAGTCAACTATAACCCCCTTGGGGGTCAGAGGTAGATGATGCAGATCCAAGTTATCTTTGTAAGTAGGGAGAAGTAGTAAGACGAGCCCTTGGTCCCCACAAAAAGTTCGAAAGTATTACCATGTTTTCCTTTTGTCTCGGATGATGGCTGTGGCATTGCTCGGAATTGTTGAAAATGTCTACACTACTATCAGTTAAATTTATTATTTGTTACATCTATTATCTATGTAAGCATAACCTTGTTTGGTGTAACAGCCTCGTACATATTCTGCTTGGAAGAAAAATGACACCATGTTTATTTCTATATGTTGTTTGAACATTTTCAGTTCTCCGTGTCTGGGATGTCCTTCTGTTTGATGGGAATCGTGTGATGCTATTCCGGACAGCTCTTGCACTACTTGAGTTTTATGGTACTGGGAATGCTTCTGATTCTCATAGTTTCCTAAAATAAAACGACAATAAGTAGTTTCATCTCGTGGGCTAGCTAGGTACTGATATTTTTCTTGATTGCAGGTCCTGCACTTGTGACCACAAAAGATGCCGGTGATGCAGTTACACTTTTGCAGTCTTTAGCTGGCTCCACTTTTGACAGCAGCCAGCTTGTCTTGACAGCTCGCATGGGATATCAGTCTGTAGATGAAACAGGATTGCAAGAGTTAAGGAATAAGCATCGGCCATCTGTTCTATCTTCAATGGAAGAAAGAGCAAAAGGTCTAGGTGCCTTGGACACCAACGGTCTTGCATCAAAGCTCTATAATTTCAAACATGATCCTGAACCACTGGTGTCAATAAGTGATTCGCAAGATCAGATGAGTGATGTGGGAGATGGGGATGCCAACCAAAGTGATTCTGGAAATATGGATGATATGTATGGCGGTCTGACAGTCAGTTCTGAGATTGAAGCTTTACCGGACCCAAAGGACCAGGTAGCCATCTCATCATAGTAATTAGATTTAGTAAATTGTTCGCTATACCTGAAGTGGCTACTGTAGTTTCTAGTTTGAATCCCTGCAGATCTTCTGATACGAACCAGTTTCATTACTGCATATCCTTTATCTGAATTATTTTTATTACTTCATATCTTCTATGGGAATCAGTTGTACTACAGCAGATCTTCTTGTCTGATTTACTCTTCTTACATTAGATCTCTTGGCTGAAGTTTGAATTATGCCGATTGCTAGAGGAGAGAAGGTCAGCTGTTCTCAGGTATGTTTTACATTTCATAATTTGATATTGTCATAATTTGCTGGAAAGTCGTTTTTCATTATTTCAAAATGAGAAATATACATGCATTCTGTCATAGGTTGCTGGAACCGTCTTATGCGACTTTGCTTTTAAATAGATTTATGGCTAATTTACCTGTATCAGTCCTTGAGTCCTGATCTGGTTGTCTACCAGTCTGAAGTATTAATTCCAATTTTCTTCTTTTTGATATCCAGAGCTGATGAACTAGAGACGGCATTGATGGAAATGGTCAAGCAAGATAATAGGCGGCAATTAAGTGCAAAGGTATAGCCAGATAACTAAACTTTTGTATAAGGAGGTGTTCCTTTGTGCCAATAGTCAGATTGCAAGTTCAGAGATGGCGTTTACAATGCAACTATGCCACAGAAATAAATTTCACCATGTTCTTTATTTCAAGTATATATAACAGTGTTTTAGAAATAATCATTCTACCAAATTATAAATGGTGCAAGATTTATCTAGTAGAGGCACTTTATTTTGAAATATCCAAATCATAACCAACACCAGTATATCATAATTCATCCTATGAGCTAAAGATATCTAATTTTCTAACATAAGTGTGTTTGAATGTCCCTCTTCTCTTTTAGGTTGAGCAGTCGGAACAAGAATTGTCTGAACTAAGACAAACCCTATTGGACAAGCAGGAACAAGAGCAAGCAATGTGTCAGGTACAGTTGACCCATTAGTTTTTATAGATGTATCTTTCTACCATGGCATGTCCACTCACCAGAAATTATATTGAAGGTACTGTTGCGAGTGGAACAAGAACTGAAAATTGCAGAGGAAGCACGCATCTCTGCTGAGCAGGATGCCGCAGCTCAGAGATACGCTGTTAATGTGCTGCAGGTTAGTCAGTCAACAAGCTCGGTCCATCCTTCTGAGATCATATTTTCTCTCTTAAAATCACTTACTCCTTCCGGTCCTAAATATTTGACACTTAGGACAAGGTTCAGTCAAACTTATAAATTCCAACAATCAATTTTATATTAGAATAAGTTTATAAAATCCAATAAGCTTATGATATTATGATAGTACTTTTTGAAGCAAATATACATGTATCATTTTTTTGTTTTAAAACTAAGTATTTAAGAAATTTCATGGTCGGAATTTTAAAAGTTTGATCAAAATCTTGTCCTAAGCATCAAATATCTATAACTGGAGGGAGTATTTTTATCTGAACTAACCAAAACGGTAGTCACGTACATTTACATGCACACATGCAAATACTGTGACATATACATATGTTGTGCCCTTAAAACATATTTGTATACTTATTTTCTATATTTTTGTAATATTGGGCTCTCATCGGATCCTGACACATATGCAGGAAAAGTATGAGGAAGCTATGGCTTCACTCGCGAAAATGGAGAACAGGGCTGTAATGGCAGAGACAATGTTGGAGGCCACACTGCAGTATCAAACTAGCCAGCAGAAAGCTCTTCTTTCCCCCTTGCCTTCTCCAAGGTATCCCAATTTGCATCTTGGAATGTTATTAGTACCAACTGTGTGCTACTCAACTGCTTGAGAGTTCAGATCGCAACTCTCATTTGCTTATGAATTTCTGTACTGTTAGAATTTTGAAAATATTTTTGGCTAGCTTTTAGAGCATGTCTAAGTTTCTAATGAGCAACTGTCAGTTCGGATTGCTCAATTATTCGTGAAAATTAGTAGGCTTTCATGACGATGCATTCATGTTAAATTATGTTCCAAGTTATTCATGTTATTTAGTGTTCCAACATTGACATTTGCTTGACTCTGTTTCCCCTCCAGAACATCCATGATAGACGCATCCCCTGGTCGAGCAAACCATGATTCATCACAGGAGTTCCAGCCCAAAAAAATAAACTTGCTCTCACCATTTTCACTGAGTTGGCGCGATAAGAACAAGGTTATTCTTCTGACCTAATAGATACATTACTGACACACGAGGCATCCTGTATGTGGCCGCACCAATTTTGGCTTAGTTAAATGGGCTTTCAATTCGGTAGATAATGTTCTGTCTGATACTCTCCATCCTTGAGTTAGAAGATGACAAGATGTTATATTATAAATTATATCCACTGTTTAGTGTTTTACAAATCATACAAAATGACCTGCCAATCTGGGTTCTTCACAGGGAAAGCAGAACAATGTTGATGACAGTGCCAAGCTTACTGATGCACATGATCAAAGGGAAGAAATAACCAACAACAAAGACGAGAAGCAGGTAGAAACACCAAAACTGGATGTGCTAGAAGAGTCTATGGGTTCACCCAAAGAAGATAACAAGTCGAGAGTAGAGGTGCCAAAGGAAGACAGCGATTTGGCAAGCGTCCAAGTAGTCGCAAATGATATGAATGGGCAGCATGAACAGTTGCAAGAAATAAAACTGGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017895