Os11g0652100

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Revision as of 09:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0652100| Description = NB-ARC domain containing protein| Version = NM_001074912.1 GI:115486472 GeneID:4351036| Length = 4639 bp| Definitio...")
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Gene Name

Os11g0652100

Description

NB-ARC domain containing protein

Version

NM_001074912.1 GI:115486472 GeneID:4351036

Length

4639 bp

Definition

Oryza sativa Japonica Group Os11g0652100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:27870549..27875187

Sequence Coding Region

27870967..27874998

Expression

GEO Profiles:Os11g0652100

Genome Context

<gbrowseImage1> name=NC_008404:27870549..27875187 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:27870549..27875187 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgagctcacggcgggcgccgtgagctcgctgttgggcctcatccgcaacgcggagctgatgatgtcgggccgcgccaaggaggacatgcagttcatcaaggatgagatggacagcatcaacggcaccctcatgtacctcaccgagaataaggcctcccacaacgaccaggtccgggtgtggatgaggcaggtccgtgatatcgcctacgtcgccgacgactgcatcacgctctaccgccgcgacctcaccccgccggagccgggcttctggccctggctccgccacgtcccgacgtggctgagcacggtgcccacccgccatcgcctcgccaagaagatccacgagctcaaggaccgtgtccgcgacgtcggcgagcggcggcagaggtatggagtggtgggggagatcccgacgaagaatgcggcgtcttcttccggccacgggtctcagacggcgccgtcttctgatgctgcggcggccacagctgcagctgatgctcgagcagatgaagaggacgacgaccagaatcatgcagcaacggcgaccgtcgtcgatggtcgtcctgaccgccgaagagctctagagcctcgcactctagaggactactgctgcgagaacctgcacaagtggctcaaggaattcaacacaaagaggggttcaatggtgccatttatcgctgttgaggcaccgcgtccagaggatgccgccgccgtttcttcaatagtctcgtatgtggcggcggaggcagctggtttcaatcccgcagtctgggtcaatctcccgctgctgcacgcggaatttgatctgccacttgaaccctgggaaattctctgctacatcctgggggagctcaagcctcgatcccagcccgtacaagcacaaggcagcagagataaacgcaagcagaagcaggaggagggaggcaaagatgacaaggccatgggcagtgacgacgacgacgacaaccttcaatcgcaagcctccgatgaaaaatggcaagtgtttgatgaaatgtgggaagagatagaaaaaaggaatttcgacgaccgcattgaacaactcaagacgaagatcgacagcatcaaggacaagaaaacgaccaatgaaatcgagaaaacggtgagaagccaagaaaaggttaatctcaacgctcttgtctacaataaacctttgggcatacttttcctggcattgctgcctcccatgccaaatgatgtaaagtcggtgaggcgtgccctgcgtaccttagcatcgggcgaggcgaatattatcagaaaaattgcagaggcgcttaaaattcatatggaagtatcagaggtgaacaagattcatctcagtaagaagcaatatgtaaacatcctgagggaagtgttcccgacagtcagcagcacgccactgaagcaggataaatctaccaccaagtccactgcactaggaccaagtgctgctgctactatgttaggcaaggatcaaatcaaagaaattgtccacaaggctatactagacaagcaattggagaagcacttggaagtggctgatgctattgaagaaactaagaacaagataggggatatcaaggagaagattaaagtccagctggtgatccaagggattgtggacaagatcaaagaccatttggagaaggataaaaggaccctgattatcctccaagatgataaaggcttcttgtcttcgtgcgaggagaccaccatgaatgctttaagcctactgggttacacttgcgctgatgcaatggtcgtggttatcacaaaggaaagccaagtggccaataaattttgctatccaccgcgagagcctattacctattctattgctggtctctatcatgataccgtgctccagcttacaagtcagcaggcgaaacaaaacaataactacaattcccagcttttccgtgacatcttggacaagtgtgatccagatgagttctgcatgaagatgtttgctcatgctttgtatgctgaacccaataggagcaacaatgatctgcgcgagttgtataaaaccctggttccacaaaaatcgctagccagtaatgcttccaaggctagtcctgagcctgacaaaagcaatgacagcacccaactggtctcagaagaatcatcgttgtgcaacaatgctaagaagatattcgagttctcctacaacgacatgcctacagaatacttgtcctgcttgctgtacctagctatcttccctcaaggccaaagcatcaggagatcaaccttacaagcacggtgggttgtagaagggctgataaccgggaaggacgattggcctagtgcagactgtgcggtgcgtaatgctgagagatgttttgacgtgctcatcgatcggtggcttgtttatccaggggatgttaccgctgcaggaaaggtcaagagctgcatggtagacaatcttgttcatgagttcatcaccaaggctgccaaggagaaacaatttgtgaaggaaagccaattgcatcacttggctcaccacttttctattttttgcaatctccgactccgccgctctgacaacatcgaaaagttcatgcaaaatctcaagtatttttcaccttatttgcaactgctcaaggtgctggatctagaaggctgccaatcatttgacaagaacaaccactacctcgaagacatctgcaacaaagttttactgcttaagtatctgagcctaaaggacacaaatgttgcccacctgcccaatgctatcaataaccttcatgagctggaggtattagatatccggcaagccaaggtacctgagattgacacaaactctatcatgcttttcaatctgaagcgactactggcaggtcaagtttatccaagcccaagatacaatagcaccggcatgtatctcaaacgacatgaagagacaatatcatccagtgtgcggattcctcgcaagattgagaaaatggttaaaatggaagtaatgtatagtgtcaacgtttcacgggatggtaatatgttgacagagattggaaagctacggcaactaagaaagcttggtgtggttatcgacgaccatgatggtcacctcaggaagttgcttcaggtgatcagtgacctgagtgggtccctccggtctttatcgatcactctaattggaacaggaagtgagcaggctccttccagcgaagagacatctgcagattgcttgaaacaacatcccaagcttctagagagcttaagcatcagtggagtgatagacaaggtgcagcttctaccattgttggccataggtcagggcaaccgtaaccttgccaaggtaactattagtgggaccatgctgaagcaagaggatctgaaaaaagacatcgccaagctccacaatctatgctgttttaggctcaggcatcgatcatacgacgatgagaaaatcacttttgaagagaatgagttcctggaactcaaataccttatcatagagggcaccaacatgatgagcattatatttaaacaaggagcagcccctaagattgagaagattatcctgtccttcacgtccacaactcatattgctggaattgttgaccttccaaacctgaaggagcttgagctgaaagggaataataatgatcggaagcttgttgcatgtcttgccggtgctcctcacctttccaggttaacactcgatggtaccttgctggatctcaatgaactgaaaatactggccgagctaccaagcttgcgcagcctcattctcctgcaacagtcttgcgtcagaagtagcctcaacttcaacaatggtgagttcagcaagctcaacctccttgttgttaattgctcgaacatcaccagcatcagcttcacagacgaaggagcagcacctaagctcgagaagatcacctggtccttcactaccaagatgttgtccctctctggcatctgctaccttccgcaactgaaggagctcgagctcaacggtaaaattatccctgatcaggtgatacaagacattaaggaacataaaaacaaacctatttttaatcaccagtaa</cdnaseq>

Protein Sequence

<aaseq>MAELTAGAVSSLLGLIRNAELMMSGRAKEDMQFIKDEMDSINGT LMYLTENKASHNDQVRVWMRQVRDIAYVADDCITLYRRDLTPPEPGFWPWLRHVPTWL STVPTRHRLAKKIHELKDRVRDVGERRQRYGVVGEIPTKNAASSSGHGSQTAPSSDAA AATAAADARADEEDDDQNHAATATVVDGRPDRRRALEPRTLEDYCCENLHKWLKEFNT KRGSMVPFIAVEAPRPEDAAAVSSIVSYVAAEAAGFNPAVWVNLPLLHAEFDLPLEPW EILCYILGELKPRSQPVQAQGSRDKRKQKQEEGGKDDKAMGSDDDDDNLQSQASDEKW QVFDEMWEEIEKRNFDDRIEQLKTKIDSIKDKKTTNEIEKTVRSQEKVNLNALVYNKP LGILFLALLPPMPNDVKSVRRALRTLASGEANIIRKIAEALKIHMEVSEVNKIHLSKK QYVNILREVFPTVSSTPLKQDKSTTKSTALGPSAAATMLGKDQIKEIVHKAILDKQLE KHLEVADAIEETKNKIGDIKEKIKVQLVIQGIVDKIKDHLEKDKRTLIILQDDKGFLS SCEETTMNALSLLGYTCADAMVVVITKESQVANKFCYPPREPITYSIAGLYHDTVLQL TSQQAKQNNNYNSQLFRDILDKCDPDEFCMKMFAHALYAEPNRSNNDLRELYKTLVPQ KSLASNASKASPEPDKSNDSTQLVSEESSLCNNAKKIFEFSYNDMPTEYLSCLLYLAI FPQGQSIRRSTLQARWVVEGLITGKDDWPSADCAVRNAERCFDVLIDRWLVYPGDVTA AGKVKSCMVDNLVHEFITKAAKEKQFVKESQLHHLAHHFSIFCNLRLRRSDNIEKFMQ NLKYFSPYLQLLKVLDLEGCQSFDKNNHYLEDICNKVLLLKYLSLKDTNVAHLPNAIN NLHELEVLDIRQAKVPEIDTNSIMLFNLKRLLAGQVYPSPRYNSTGMYLKRHEETISS SVRIPRKIEKMVKMEVMYSVNVSRDGNMLTEIGKLRQLRKLGVVIDDHDGHLRKLLQV ISDLSGSLRSLSITLIGTGSEQAPSSEETSADCLKQHPKLLESLSISGVIDKVQLLPL LAIGQGNRNLAKVTISGTMLKQEDLKKDIAKLHNLCCFRLRHRSYDDEKITFEENEFL ELKYLIIEGTNMMSIIFKQGAAPKIEKIILSFTSTTHIAGIVDLPNLKELELKGNNND RKLVACLAGAPHLSRLTLDGTLLDLNELKILAELPSLRSLILLQQSCVRSSLNFNNGE FSKLNLLVVNCSNITSISFTDEGAAPKLEKITWSFTTKMLSLSGICYLPQLKELELNG KIIPDQVIQDIKEHKNKPIFNHQ</aaseq>

Gene Sequence

<dnaseqindica>190..4221#gctttatttatttaataataaagggatcgctaagctttattgctggtgtggtgctcacctgatatcccaagcaagttcgatattctcgacttaaataggctggccattttactaagcaaagctgaagtaagcctagctagctagccagaatactgaaggtgtgtggtgtgttgtggctggacggcggcgatggctgagctcacggcgggcgccgtgagctcgctgttgggcctcatccgcaacgcggagctgatgatgtcgggccgcgccaaggaggacatgcagttcatcaaggatgagatggacagcatcaacggcaccctcatgtacctcaccgagaataaggcctcccacaacgaccaggtccgggtgtggatgaggcaggtccgtgatatcgcctacgtcgccgacgactgcatcacgctctaccgccgcgacctcaccccgccggagccgggcttctggccctggctccgccacgtcccgacgtggctgagcacggtgcccacccgccatcgcctcgccaagaagatccacgagctcaaggaccgtgtccgcgacgtcggcgagcggcggcagaggtatggagtggtgggggagatcccgacgaagaatgcggcgtcttcttccggccacgggtctcagacggcgccgtcttctgatgctgcggcggccacagctgcagctgatgctcgagcagatgaagaggacgacgaccagaatcatgcagcaacggcgaccgtcgtcgatggtcgtcctgaccgccgaagagctctagagcctcgcactctagaggactactgctgcgagaacctgcacaagtggctcaaggaattcaacacaaagaggggttcaatggtgccatttatcgctgttgaggcaccgcgtccagaggatgccgccgccgtttcttcaatagtctcgtatgtggcggcggaggcagctggtttcaatcccgcagtctgggtcaatctcccgctgctgcacgcggaatttgatctgccacttgaaccctgggaaattctctgctacatcctgggggagctcaagcctcgatcccagcccgtacaagcacaaggcagcagagataaacgcaagcagaagcaggaggagggaggcaaagatgacaaggccatgggcagtgacgacgacgacgacaaccttcaatcgcaagcctccgatgaaaaatggcaagtgtttgatgaaatgtgggaagagatagaaaaaaggaatttcgacgaccgcattgaacaactcaagacgaagatcgacagcatcaaggacaagaaaacgaccaatgaaatcgagaaaacggtgagaagccaagaaaaggttaatctcaacgctcttgtctacaataaacctttgggcatacttttcctggcattgctgcctcccatgccaaatgatgtaaagtcggtgaggcgtgccctgcgtaccttagcatcgggcgaggcgaatattatcagaaaaattgcagaggcgcttaaaattcatatggaagtatcagaggtgaacaagattcatctcagtaagaagcaatatgtaaacatcctgagggaagtgttcccgacagtcagcagcacgccactgaagcaggataaatctaccaccaagtccactgcactaggaccaagtgctgctgctactatgttaggcaaggatcaaatcaaagaaattgtccacaaggctatactagacaagcaattggagaagcacttggaagtggctgatgctattgaagaaactaagaacaagataggggatatcaaggagaagattaaagtccagctggtgatccaagggattgtggacaagatcaaagaccatttggagaaggataaaaggaccctgattatcctccaagatgataaaggcttcttgtcttcgtgcgaggagaccaccatgaatgctttaagcctactgggttacacttgcgctgatgcaatggtcgtggttatcacaaaggaaagccaagtggccaataaattttgctatccaccgcgagagcctattacctattctattgctggtctctatcatgataccgtgctccagcttacaagtcagcaggcgaaacaaaacaataactacaattcccagcttttccgtgacatcttggacaagtgtgatccagatgagttctgcatgaagatgtttgctcatgctttgtatgctgaacccaataggagcaacaatgatctgcgcgagttgtataaaaccctggttccacaaaaatcgctagccagtaatgcttccaaggctagtcctgagcctgacaaaagcaatgacagcacccaactggtctcagaagaatcatcgttgtgcaacaatgctaagaagatattcgagttctcctacaacgacatgcctacagaatacttgtcctgcttgctgtacctagctatcttccctcaaggccaaagcatcaggagatcaaccttacaagcacggtgggttgtagaagggctgataaccgggaaggacgattggcctagtgcagactgtgcggtgcgtaatgctgagagatgttttgacgtgctcatcgatcggtggcttgtttatccaggggatgttaccgctgcaggaaaggtcaagagctgcatggtagacaatcttgttcatgagttcatcaccaaggctgccaaggagaaacaatttgtgaaggaaagccaattgcatcacttggctcaccacttttctattttttgcaatctccgactccgccgctctgacaacatcgaaaagttcatgcaaaatctcaagtatttttcaccttatttgcaactgctcaaggtgctggatctagaaggctgccaatcatttgacaagaacaaccactacctcgaagacatctgcaacaaagttttactgcttaagtatctgagcctaaaggacacaaatgttgcccacctgcccaatgctatcaataaccttcatgagctggaggtattagatatccggcaagccaaggtacctgagattgacacaaactctatcatgcttttcaatctgaagcgactactggcaggtcaagtttatccaagcccaagatacaatagcaccggcatgtatctcaaacgacatgaagagacaatatcatccagtgtgcggattcctcgcaagattgagaaaatggttaaaatggaagtaatgtatagtgtcaacgtttcacgggatggtaatatgttgacagagattggaaagctacggcaactaagaaagcttggtgtggttatcgacgaccatgatggtcacctcaggaagttgcttcaggtgatcagtgacctgagtgggtccctccggtctttatcgatcactctaattggaacaggaagtgagcaggctccttccagcgaagagacatctgcagattgcttgaaacaacatcccaagcttctagagagcttaagcatcagtggagtgatagacaaggtgcagcttctaccattgttggccataggtcagggcaaccgtaaccttgccaaggtaactattagtgggaccatgctgaagcaagaggatctgaaaaaagacatcgccaagctccacaatctatgctgttttaggctcaggcatcgatcatacgacgatgagaaaatcacttttgaagagaatgagttcctggaactcaaataccttatcatagagggcaccaacatgatgagcattatatttaaacaaggagcagcccctaagattgagaagattatcctgtccttcacgtccacaactcatattgctggaattgttgaccttccaaacctgaaggagcttgagctgaaagggaataataatgatcggaagcttgttgcatgtcttgccggtgctcctcacctttccaggttaacactcgatggtaccttgctggatctcaatgaactgaaaatactggccgagctaccaagcttgcgcagcctcattctcctgcaacagtcttgcgtcagaagtagcctcaacttcaacaatggtgagttcagcaagctcaacctccttgttgttaattgctcgaacatcaccagcatcagcttcacagacgaaggagcagcacctaagctcgagaagatcacctggtccttcactaccaagatgttgtccctctctggcatctgctaccttccgcaactgaaggagctcgagctcaacggtaaaattatccctgatcaggtgatacaagacattaaggaacataaaaacaaacctatttttaatcaccagtaagatcgaaaaggagcagaagaagagaaacaacagatgcaaacgtatgcatccttcattcgtccatgtaaagttggtgtgtgctagctgcatgctttgttacaaataaacttgtgtcgatctgctttgtgtttctgtttctagtagtttttccctcccctgtttttctgttgattctgttagagtcacgcacatgacctcgctgtgttttcggtcgtgtgcgacgttggggcttgtcgtgtgcgtttagttcgcacgggggctcgtcatgcgcgggcacgatcttggtgattgggatggcagtcgccgttgagggatcgtgtccgcgtcaactgggccaacgtacgtgcccatgatcttgtattcacagaataaaaggaagaagataaacagaaaatgctgctcagttgttcgcagcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0652100, RefSeq:Os11g0652100