BGIOSGA017922

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Revision as of 02:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017922| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017922, complete gene.| tag = OJ1362_...")
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Gene Name

BGIOSGA017922

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017922, complete gene.

LocusTag

OJ1362_D02.3

Ensembl Transcript ID

BGIOSGA017922-TA

Ensembl Protein ID

BGIOSGA017922-PA

Length

3769

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23836023..23839791

Sequence Coding Region

23839620..23839791,23839403..23839517,23838903..23838970,23838306..23838352,23838082..23838229
,23837938..23837997,23837658..23837856,23837432..23837493,23837235..23837335
,23836937..23836991,23836815..23836862,23836023..23836198

Genome Context

<gbrowseImage1> name=IndicaChromosome05:23836023..23839791 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:23836023..23839791 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACCCGATCCGATCGGCCCTCGCGAGGGCGCTCCTCTCCCCGAAGCCCCGCCCGCCGCGCGCCCGCCACTACGCAACCTCCTCCACCGGCGGCGCGACGCAGCCGGAGAGCGTGGCGGCGGAGATGGTCCGCTACGCCCTCGGCGGAGCCAGGCCCGGTAGCTCGCCAGATGAGGCGATGCGGATACTGGAGCAGGGGGCCTCGAACCTGCAGGGAGGCGGCGAGGGGTGCGGTGAGGCCGTTGGGATGCTCATGCTCGCGATGTCTACGCTGCTCTATCGGAGTGGAAGACGCCAAGAAGCAATGGAAAAACTCAAGGCAACCAACCAAGTTGCTCCTGCAGCTTTCAGAGTTGCAGCATGGGAAGCAACAATGGGGCTGTGCATGGAAGCGGGCCAGGTTATCAACACCTCAGTGTCCCCAGATGATTTGGTCGATCTATCAATCAAGGATGATAATATCAAATGGTCAGATCAGGGCCATCTGAAATGTCGGGTTAATGCTATCAAAGGGCTTATTGCACTTCTAAATGGAGAGACGGAATCAGCCCAGCTGTTCTTCGACGGGTGCAAGGACCTATGTGCTGGAGTAGGCAATAAACAAACTGAAAATGCTGTACTTTCATATTGTGAATATCTGCACTGTGTTGGGGATTTTCCTTTGGCTACTCAAATGTATGAAAGGGTTCTGGAGGCATTAACCATGGAAGACATGTCTGGAAATTTTTTAGCCGCATGTAACATGGTTCCTGAGGAGGTTTCTCTTGGGGCCACCTGTTCATATGGCCAGCTTTTATCACATTCAGGGAAGTTCAGTGAGGCAGAGGATTATCTCACAAGGGCGCTAAAGAAGGCTGAAGATCAATTTGGGGCAAATCACCCAAAGGTTGGCATTGTATTGACTTGTGTAGCTAGAATGTACAAACTGAAAGCAAAAGCAGAAGGTTCTAGCTCAATAATGGTTCAGGAGGGGTTATACAGGAAGGCCCTAGAAGTATTAAGAGCCCCTGCCATTAACTCTGAGGGTGTGAGCAAGCAGATGGATTGGAGGGACATCATCTCCCTTGCTAGAGGAGAGTATGCAGAATTGTTGCTTATTCAGTCAAATAGAAAAGCCGAAGGTGAACGGATGAAAGAATGGGCAGAACATGCTTGGAGGAATAGTAGATTAACATTAGCTCAAGCCTTGGAATTTTCAGGACCTTCAAAACCAACAGTTGTTGATACCCGGATCGGCAGGGTCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MNPIRSALARALLSPKPRPPRARHYATSSTGGATQPESVAAEMVRYALGGARPGSSPDEAMRILEQGASNLQGGGEGCGEAVGMLMLAMSTLLYRSGRRQEAMEKLKATNQVAPAAFRVAAWEATMGLCMEAGQVINTSVSPDDLVDLSIKDDNIKWSDQGHLKCRVNAIKGLIALLNGETESAQLFFDGCKDLCAGVGNKQTENAVLSYCEYLHCVGDFPLATQMYERVLEALTMEDMSGNFLAACNMVPEEVSLGATCSYGQLLSHSGKFSEAEDYLTRALKKAEDQFGANHPKVGIVLTCVARMYKLKAKAEGSSSIMVQEGLYRKALEVLRAPAINSEGVSKQMDWRDIISLARGEYAELLLIQSNRKAEGERMKEWAEHAWRNSRLTLAQALEFSGPSKPTVVDTRIGRVM</aaseq>

Gene Sequence

<dnaseqindica>1..172#275..389#822..889#1440..1486#1563..1710#1795..1854#1936..2134#2299..2360#2457..2557#2801..2855#2930..2977#3594..3769#ATGAACCCGATCCGATCGGCCCTCGCGAGGGCGCTCCTCTCCCCGAAGCCCCGCCCGCCGCGCGCCCGCCACTACGCAACCTCCTCCACCGGCGGCGCGACGCAGCCGGAGAGCGTGGCGGCGGAGATGGTCCGCTACGCCCTCGGCGGAGCCAGGCCCGGTAGCTCGCCAGGTTGTCCCCCCATTGCTGCGTGGTGCCGCTGAGCGCTAGGGTTTTTTAGCCTCACTCGGTCGCTCCGTCATGTGAGCTGAATTGCTGTTGCTGTTGTGCCAGATGAGGCGATGCGGATACTGGAGCAGGGGGCCTCGAACCTGCAGGGAGGCGGCGAGGGGTGCGGTGAGGCCGTTGGGATGCTCATGCTCGCGATGTCTACGCTGCTCTATCGGAGGTCCGGTGCTAGACATCTGGATTTTGTAATCCAAACACTTTATATTGAGCAGTTTGGGTCGTTTCTATCTAATCTGCTCGTAAATTTGCCCTTTAATAGGATTCAATTTGGTCCCTGATCTGCATAGCTGGTTTTAGCCACTCGTTTTTTACCTATATGTTGACATTTAGGAAGGATTTAGACATAACAAGCATTACAGAAAGGAAAAGAGGATTGTGCATATAGATAATCTTGCGAAACGTAATACACTACACCTCAGAATCCTATGCTAGCTAGCAGGATTGGTATCACTTGTGGGAAATTAATATCCATTTCCTTTAGATAATGATGTTTAACTGCCCACAACTCCCATTTTATACTGGATTTAACTTTTCTAATTTTACCTTCCCAGTTGAGTAGTTTGAGTAACATCATGTTAGTTTCTCGGTACAGTGGAAGACGCCAAGAAGCAATGGAAAAACTCAAGGCAACCAACCAAGTTGCTCCTGCAGCTTTCAGAGGTGCTTTTATAGTCCTTTCTGTAAATACTAAAGTTTACTAAGTAGCATTCTGTATTGGGAGCAGGCTGAAATACTAGCTATGTGAACTTCTCAAACAAATGGGTCTCCCAAGTCTCATATTTATCTTGTGATTTTAGCAGCCACCAGGGACAAGGAAAAACTACAGATATTTGGAACTTATCATTTGATGATCTGATGGTTATTCAATTATTGTAGCCTAGACCCAATAGAAAAATTGCCGCTCGGGAGCACATTTTAGTGCCACATTGTTAATTGAGTAGATAATACCAACATACTAAGTTATGAACACACGGACAAATGCATGTCTACCATTGTGTTAGCCCTTCTATATGAAGTGGAAGGGTGTTGGTGTGTGTAATTTGTCTAGCACTCAGTTAAACGGTGATATATCTTTGATCTGGAACATTACAAGCTTACAATTATCTTTTGTCGAGTAAGAATGTAAATCATCATTTGATATGGAAAGAGTTGAGGAGAGGGAAGCTTTTGATCTTAACTGATGTTATATATTTTGGTAAATAACGTGCAGTTGCAGCATGGGAAGCAACAATGGGGCTGTGCATGGAAGCGGGCCAGGTTTTCCACAGCACTCAAGCACATTTAGCCTTGTATGGTTTTAGGTGAATTATTTTCATGATTACCTTAAACACAGGTTATCAACACCTCAGTGTCCCCAGATGATTTGGTCGATCTATCAATCAAGGATGATAATATCAAATGGTCAGATCAGGGCCATCTGAAATGTCGGGTTAATGCTATCAAAGGGCTTATTGCACTTCTAAATGGAGAGACGGAATCAGGTTATTTTTATTTACAATGGCCTATCTCTTGTAGATCATAGGTAAGGCATTTTGTCCAAAATGATTTACAGCTGTTCTTACCAGCCCAGCTGTTCTTCGACGGGTGCAAGGACCTATGTGCTGGAGTAGGCAATAAACAAACTGGTATGGAAGTCTCTGAGACAATTTGGCCTTTCACATTCTTCCCTGCAATTATTTCATACACAATAGTGATGTTCCTTACAGAAAATGCTGTACTTTCATATTGTGAATATCTGCACTGTGTTGGGGATTTTCCTTTGGCTACTCAAATGTATGAAAGGGTTCTGGAGGCATTAACCATGGAAGACATGTCTGGAAATTTTTTAGCCGCATGTAACATGGTTCCTGAGGAGGTTTCTCTTGGGGCCACCTGTTCATATGGCCAGCTTTTATCACATTCAGGGTAAGATGACAATTTCTGAATCTTTTATGTTGTCCTTTTTAGTCCTAATGTTTGCTTGATAAACTTGGGAGCATTTGGCTTTTGAAATGTAGCAATTCTGTGTTCCCCCTTCCCTTTTGTTCCATCTTCCAACTGAGAGCACTTGCCTTTTCCTTTCAAACCAGGAAGTTCAGTGAGGCAGAGGATTATCTCACAAGGGCGCTAAAGAAGGCTGAAGATCAATTTGGTTTGTCAAGCTAATTTATTAAATAATATAATAATAAATAATGGCAGAATCAATTGCCTATAAGTTACCAATACTGCAAGCTTTCAATCCATGCAGGGGCAAATCACCCAAAGGTTGGCATTGTATTGACTTGTGTAGCTAGAATGTACAAACTGAAAGCAAAAGCAGAAGGTTCTAGCTCAATAATGGTTCAGGAGGTCAGTAAATATCTCATTCCTGTTCTGCTTGCCCTGTTGTCCATCAGTAGAAACTATAATGGCCTTGTTCCTTTGATCCTTAGTTTTAATGATGAGACAATTCATGTACTTTCTCGAACGAGTTTGCTCGCAGTTATAATTATCACTGCTCTACAGACTACAGAGTACAGATGCTGTGAGTAAACTTTTTTCAGTCTGGGTGGGTTGGGACTTTGAGCTTATCAAACCAGCTGTGTATTACAGGGGTTATACAGGAAGGCCCTAGAAGTATTAAGAGCCCCTGCCATTAACTCTGAGGGTAAAACAATAATCTCTTATGATATGGCTCGTTTTAACCACTTGAGGATTTTATTATTTTATTTTATTTTTTAGGTGTGAGCAAGCAGATGGATTGGAGGGACATCATCTCCCTTGCTAGAGGTTACACTCTGAACTATCGCTCCTATTAATCCCTTCTTTAATTTATTGCACCAAACTCTTAAATAAGATCATTACATCAAATGCAACTTTTAAAGAACTAGTTGTGTGGTGCATCCAGGATTATGGCATATATATAATTTAAAATTGAGAAAATTGTCACCATGATTGATTGACAGCTAACTTCACTATAACCTAACAATATGGCATCCAAATCTGCCCTGCCTGTTTGTTTAGTAAAGTAGGATTTCGTGATATATTACTTCTGTTGGAGCTCATCAAGGGATGTGTCATGTGTGAACACAAATTTCTAATAATTTTTGTATCGGGGAAAACAATTCTTAGATTTGACAAACAGGCGTAGTGCCTTCTTGCGCACAAATGCTAGACCGAGCTGCGATTTTCTAAGCCCCAACAAATATAACATTTTTTTATATAGTCGATTGGACGCAATCATATGCTGATTGTTGTTTTAAACTGGCAGCAATCAAATAATCAGCAATTTTTTTTTAACTCATTGATTTCTATGTTGATGTTGCTTGTATGGATGCTTCTACTCCCATAGTCCCATTCTAGTTGAGGCCATACTGAATTTTGTCTTTACATGTTCAACTTTCAGGAGAGTATGCAGAATTGTTGCTTATTCAGTCAAATAGAAAAGCCGAAGGTGAACGGATGAAAGAATGGGCAGAACATGCTTGGAGGAATAGTAGATTAACATTAGCTCAAGCCTTGGAATTTTCAGGACCTTCAAAACCAACAGTTGTTGATACCCGGATCGGCAGGGTCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017922

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA017922&oldid=46678"