BGIOSGA017926

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Revision as of 02:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017926| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017926, complete gene.| tag = OsI_202...")
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Gene Name

BGIOSGA017926

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017926, complete gene.

LocusTag

OsI_20201

Ensembl Transcript ID

BGIOSGA017926-TA

Ensembl Protein ID

BGIOSGA017926-PA

Length

4428

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23809631..23814058

Sequence Coding Region

23813860..23814058,23813042..23813115,23812864..23812948,23812661..23812786,23812323..23812574
,23811993..23812226,23811465..23811508,23810316..23810498,23810074..23810164
,23809832..23809875,23809631..23809753

Genome Context

<gbrowseImage1> name=IndicaChromosome05:23809631..23814058 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:23809631..23814058 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGGATGGGGGAGGCGCGGGGAGGAGGAAGGAGCGGGTGGTGCTGATGTGGGGGTACCTCCCCGGGGTGTCGCAGCAGCGGTCGCCGCTGCTGGGGCCGGTGCCCGTGAGGATGCCGGACGCGGCCGCGGCGGCCGGTGATGCGTGGAGGGATGTGGCCGGCGGCGGGTGCGGCTTCGCGATGGCCGTCTCCGAGCAAGGAAAACTCTTCACTTGGGGCTCTACCGATGATATGGGACAAAGTTACGTGACTGCTGGGAAGCATGAGGAAACTCCGGAGGCATTTCCTCTTCCTAGTGATATTGCAATTGTAAGGGCTGACGCTGGATGGGCACATTGTGTTGCAATAACAGGTAAAGGTGATGTCTACACATGGGGTTGGAAAGAATGCGTTCCAACTGGAAGGGTCATTGCAGACCATTCTGCAACTGGGGCTATGGATTGTGATAAAAGGCAAAGTGGGGTTGCCACTGACCAAGGAAACTCGATTACAGTGAGCCCCAGGTCAAAGGTGTCTAGGACAAGCACCAAGGCAGCATCTGGTCCTGCTGAAAGCCGAAGTTCTGAGGATAGCACAAAGCGACGGAGGTTATCTTCATCGAAACACGGGGCTGAAAGTGAATCATCTAGTGATGAAAATCTTTCAGCACCACCTTGTGTTGTGACATTTAATACAGGAGTGAAGATAGTGGAAGTAGCTGCAGGTGGCCGTCATACATTAGTGCTGTCAGATTTTGGTCAGGTCTGGGGTTGGGGCTATGGTGGGGAAGGACAACTAGGTTTAGGCTCTAGGATCCGGACAGTTTCCTCCCCACATCCCATACCTTGTGTTCAATCGGCGTTCTACAGCAAGGACCGTACAGGAATTGTGATGGGTAGCAGAACTTTGGAAGGAACAAATGATAGAGCTGCAACTTGCGTGAAAGCAATTGCCTGTGGAGGCCGTCATAGTGCTGTGGTGACAGATTCAGGAACACTTCTTACATTTGGATGGGGATTATATGGACAGTGTGGACAAGGGAACACGGATGATATTTTAAGCCCAACGTGTGTTTCGGCTATTATGGGAGTGAAGATACAACGTGTAGCAGCTGGGCTATGGCATACTGTATGTACATCTGCTGATGGTGATGTATATTCCTTTGGAGGTAACCAGTTTGGGCAGCTGGGAACTGGATCAGATCAAGCTGAGATTGTTCCAAAGTTGGTAGAAGCCTCGAAATTGGAAAATAAGCATGCAAGAGGTGTTTCGTGTGGAGCCCGACACAGTGCAGTCATAACAGATAAAGGAGATGTCTTCTGCTGGGGTTGGAACAAGTACGGTCAGCTTGGTTTGGGCGACTCAACAGACAGAAACGTACCATGCCAAGTGCCCGTGGAAGCGTACAACCCGCTAAACGTTTCATGCGGTTGGTGGCACACGTTGGTTCTCGCGGAATATCCTACCTGA</cdnaseq>

Protein Sequence

<aaseq>MEEDGGGAGRRKERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKLFTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKECVPTGRVIADHSATGAMDCDKRQSGVATDQGNSITVSPRSKVSRTSTKAASGPAESRSSEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIVMGSRTLEGTNDRAATCVKAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLWHTVCTSADGDVYSFGGNQFGQLGTGSDQAEIVPKLVEASKLENKHARGVSCGARHSAVITDKGDVFCWGWNKYGQLGLGDSTDRNVPCQVPVEAYNPLNVSCGWWHTLVLAEYPT</aaseq>

Gene Sequence

<dnaseqindica>1..199#944..1017#1111..1195#1273..1398#1485..1736#1833..2066#2551..2594#3561..3743#3895..3985#4184..4227#4306..4428#ATGGAGGAGGATGGGGGAGGCGCGGGGAGGAGGAAGGAGCGGGTGGTGCTGATGTGGGGGTACCTCCCCGGGGTGTCGCAGCAGCGGTCGCCGCTGCTGGGGCCGGTGCCCGTGAGGATGCCGGACGCGGCCGCGGCGGCCGGTGATGCGTGGAGGGATGTGGCCGGCGGCGGGTGCGGCTTCGCGATGGCCGTCTCCGGTGATGTTGCCTTTCTCTCTCGTTCCTGTGTTTCCATTGCTTGATGTTATCGTTGCGTTCGAGTTCGTTCGATCTGTGGCACCAAGAGGGTCGTGGGAGATCTAGTAGGGTGCTGGTGTGGTTTGTGTGAAGTTTTTATTATCGGGGATGATTAGCGTGCAGTGGTTTAGTAGTTAGTTGTGCGGATTTTTGTGTATATGGTGGGTTCCATGAAAACGCGAGTATAAAATTGGATAAAAAAGGTCTTAAGAATCTGAGTGATTGTCTGTGAATTGATTGGTGAGCAGCTTAGTGCCGGGTGTTCAGTTATTGCCGATTTTTTTTTTCTGGATAGGTGGTTGATGAGGGTGGAATGTGCTGTATGACTATTTTCCTGATTGGTGGTTGATCAGGGTGGAATATGCTGTCTGACTAAGTTGTGATTGATAGTGCAAGCAGCTAGTGATTTCGACTTTTTTTTTTGGTCGAGCGACAGAGAATATCAGAACACTGTTTTGCCCCGTATCGTGTTGTGGGAATGTGTTATGTGATATTGTCAGCTAGTGTATTTTTGTGGAATTGCTTTTAGTTAGACTAATTTTCCATAACAACTCCATTACTCCAAGGATTATTCTATGTTTTTAGGTAGTTCTGTCAACCATCAGAAGATTGCATTTTTGCTTGGTCGGATTGTGTGCTATTAGCATTTTACTCCGTACGTCAACTGAGCTTGACACTGACACAGCTTGTATCTGCCTGATGCAGAGCAAGGAAAACTCTTCACTTGGGGCTCTACCGATGATATGGGACAAAGTTACGTGACTGCTGGGAAGCATGAGGTATCTCTGTACCTTTGGGCTAATTGTTTGTTTCCAACGTGTTCTTGATAAACTTATAAACTGTTACTGAAGTAAACATCTTGTTCCTCTCAGGAAACTCCGGAGGCATTTCCTCTTCCTAGTGATATTGCAATTGTAAGGGCTGACGCTGGATGGGCACATTGTGTTGCAATAACAGGTTGTGTATTGATCCATGCATTTTAGTGAAAACTGCACATAACTTTGCATTACACTGATTGAATTCCACTCAAGCAGGTAAAGGTGATGTCTACACATGGGGTTGGAAAGAATGCGTTCCAACTGGAAGGGTCATTGCAGACCATTCTGCAACTGGGGCTATGGATTGTGATAAAAGGCAAAGTGGGGTTGCCACTGACCAAGGTGGTGGTGCTTACTACTTATTTCTTTACAGTTCTACATAAAAAATATAAGCTTTTCTACATCCGTTGTTTACAGATGTAATATAGGAAACTCGATTACAGTGAGCCCCAGGTCAAAGGTGTCTAGGACAAGCACCAAGGCAGCATCTGGTCCTGCTGAAAGCCGAAGTTCTGAGGATAGCACAAAGCGACGGAGGTTATCTTCATCGAAACACGGGGCTGAAAGTGAATCATCTAGTGATGAAAATCTTTCAGCACCACCTTGTGTTGTGACATTTAATACAGGAGTGAAGATAGTGGAAGTAGCTGCAGGTGGCCGTCATACATTAGTGCTGTCAGGTAACTTACATTGGGCGTTTACTGCTGTATTCTCTTCACACTCAACTAGGTTAGGTAAGCATGCTGATCAGCGAAATATTTTCTCCAAAGCTTCAGATTTTGGTCAGGTCTGGGGTTGGGGCTATGGTGGGGAAGGACAACTAGGTTTAGGCTCTAGGATCCGGACAGTTTCCTCCCCACATCCCATACCTTGTGTTCAATCGGCGTTCTACAGCAAGGACCGTACAGGAATTGTGATGGGTAGCAGAACTTTGGAAGGAACAAATGATAGAGCTGCAACTTGCGTGAAAGCAATTGCCTGTGGAGGCCGTCATAGTGCTGTGGTGACAGGTCAGACTCTACTGTACTCAACCTCTTTGAATCAAGTTCCTCTTATTTTCTTTATTTCTCTTTTATTCATACTAAAGTAATGTCAATCGTCATTCATATATTATGCCGATGTTTTGGGCCCTGAACATTTTCAGTTGTGTTAAAAATTTAGAATCCATTTTTTTTGTTCCTGGCATATTAACTATCAATCATCTAGACTGATGTGATTTAGTGTTTAACATGCCCAGCACTCTGAGATAATGCCTGACATCATATTATTCGGTGGGTAAACTTGGAAGTAGTTTCAGCACTGCTCACTCTAGAGTTACAAAGTGCAAACCAAATTGTGTGATGACTTCTTAGAAGACATTCAGCCAAAATAACTTTAACCCAATGATAAAGGAATCACCTTCTATTTTCCACTTTCCGGGATACAATCTAAATCATACATGCTAAATAAAATTTTCTTCTGTTGCATTTCTTGACAATCAACTTATTCTTGCAGATTCAGGAACACTTCTTACATTTGGATGGGGATTATATGGACAGGTTTGTTTTACTTTGTTGCATCCTTTCGTTCCATCCTGGATTTTGCAGATTTGTTAGCTTTACTGTTGCATGCATAAGACTAAGTTTCACCAATAATTTTGAACTTGTCTTGGATGAACGTTTACCTTTATGAAATCATTAAACTTTCTGTTAGTCTATTCTGCTTGGTATGTTGATTGAAATAGTTGTTATAATAACTGATTGGTTGTAAAGAGTCATGCTGCGAGTTCTGTGACTGTAAAATATCCTTTTGTGCATTAAAAAAAACCTGTAATCTAGGCCAGCTCAACCATTAGTCATGGTATACCAAATATGTGAACTGGTTATAAATTGTGTTTGATTTTGATTTTCATATTTTTATACAAACCACCTCCTGTTTTGTAATAACTTTGCTGAGAGGTCCAGTCCAACCATACGAATAGAGTCATCATCCAGATCAACTGTATTGACAAGGGTTCTATTTAGACAATGTACCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAGTGTAGGTTTACCCGGTAAGAACGACTAAAGGTTGCTGGAATTAAGTGGGGTGTTGCTTAGTTTCATCAACAGCGGCTGCTAGTAATTAAATGGGTAGCCTGGAGAGAATACAGTCCAGTATACGAAGTAATAATCTTGTTGGGCCTGTTGAGCCTTCACATGGAAATGAGAAACACTTGACTGGTGCAGTAACACGTGTTCTGAAAGAGTTGAGATAATAATGTGTTGGGCCTTTGGACTAGCACATGGAAATGAAAACATTTGACTGGTGCAGTAACCAGTGTTTTAAAACAGTACTAAGTACAAACTATTGGGGGCGTTCAGATATGCATTTTGTTAATCTGGTGGAGAAGCTTGTTTTTTAGTATGTACTGTTGCCCGTAGAGCTTCCTGTCAACGTTTTTCACTGTTGTATTTTTTTTAAACATTATTCACTGTTGTATCCCCTTTTGTTCAGTGTGGACAAGGGAACACGGATGATATTTTAAGCCCAACGTGTGTTTCGGCTATTATGGGAGTGAAGATACAACGTGTAGCAGCTGGGCTATGGCATACTGTATGTACATCTGCTGATGGTGATGTATATTCCTTTGGAGGTAACCAGTTTGGGCAGCTGGGAACTGGATCAGATCAAGCTGAGGTAGAATTCTAATCTTCAGGCACCTCATACTAGGATAATGTAGATTTGTCCTGTTGACAATCTCTTCCACTTCCAAAAATCTATACTGCATTGATACTAGTTTTAGAAATAAAAATGATCAATTAATGCCAGGACCATCAATCTTATGCAGATTGTTCCAAAGTTGGTAGAAGCCTCGAAATTGGAAAATAAGCATGCAAGAGGTGTTTCGTGTGGAGCCCGACACAGTGCAGTCATAACAGGTACACTCCTGGCTCTATTCTGCATTTCCTTCAATTGATAGAGTTTTGCTCTCTCTTGGAATGTGCTTCATCCATCATTTTGTGTTGTACTATGAACGTTGTACCCTTAAGGTCCCATACATTTATTTCCAAAGGTTCAATTTGTACTCAAATGGTTTGCACACTGTAATTTAACAGGATTTTTTTTTTTTTTTGCAGATAAAGGAGATGTCTTCTGCTGGGGTTGGAACAAGTACGGTCAGGTAGGCCTTCTGCTCTTTGTCCAAATCTGTCAATGGAACTCATCGAATCATGTCTGAAACTTTTAATTGTGCCAACAGCTTGGTTTGGGCGACTCAACAGACAGAAACGTACCATGCCAAGTGCCCGTGGAAGCGTACAACCCGCTAAACGTTTCATGCGGTTGGTGGCACACGTTGGTTCTCGCGGAATATCCTACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017926