Os09g0353500

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Revision as of 07:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0353500| Description = K+ potassium transporter family protein| Version = NM_001188866.1 GI:297726862 GeneID:9271222| Length = 5965 bp| De...")
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Gene Name

Os09g0353500

Description

K+ potassium transporter family protein

Version

NM_001188866.1 GI:297726862 GeneID:9271222

Length

5965 bp

Definition

Oryza sativa Japonica Group Os09g0353500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11858237..11864201

Sequence Coding Region

11858237..11858707,11861504..11861575,11861710..11863031,11863066..11863114,11863192..11863617
,11863684..11863728,11863765..11863914,11863998..11864201

Expression

GEO Profiles:Os09g0353500

Genome Context

<gbrowseImage1> name=NC_008402:11858237..11864201 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:11858237..11864201 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcttgtcaccggcggctgcttcctccgccacctcgacgagctagccaagtacgtgctcatcatgctccgcgccgacgacggcggcaagggtagcaccttcgcactctacttcctcatgtaccgccacgtctgcgttgggctcctcctccctggtgctggcgccgccggtgaggagctcgtggtcgcggggcagtgcgttgatggtgcgggcgtggccgcgtgggcgccgcagtcggcgccgccggcgaggagctcgtggtcgcggggcagtgcgtcgatggtacgggcatgggtgtcgcagccggcgccgccggtgaggagctcgtggtcgcggggcagtgcgtcgacggtgcgggcgtgggcgccgcagcgccgctgcccatgtcagccatgcgtgcgagctggagtggcacagtgtcctgcagaggctgctgctgctgctgctgctcgggacgtgcatggtcagcggatgcatactctgttcttcgaatcaatcgaatccgcctcgatcccaatatcaaccgtcgaatacgtcaagctctttcttggcccaatcagcaatctagatcctactgagttcataaacggtgaaaccaaccgaatcccattaagattcgccaatcgagatctcagtacttggaagggtaccttcaaatcctggccatcagccgagaccagctggcctgcttggtacaagaggatgttagttagcaaatcgactcactgggatgaaatcggcatatcccaggctctggcgttaactgcaacaaatatggcaagggatgaacccatgatgtcagcagctacctatttctggtccacaaccatgaatgccttcctgttctcacaaggaccgatgaccccaactctactggatattgttatgatcactggtctagacattacctcgtcggctaacctgtccagccttaacacccaactcactcacgagtttaaaactagaagcatagatggttggggtggttatgttgccaagaatatgggaactgggccagtcaccccaagagaacacacagctttccttatgatgtggcttgagaagttcttgttttgtggtccaagctatggtccgactgcaaactggcaaagggtagctgaaaacctggtggaaaagaagcattttccccttggcaagtatctgctcggctacttgtatctgaccctcaataccgcagttgacaagatggcctctggaaaaacaatcggcacaggaggtccatggtggttactccaaacttggctaaacctgcacactagaaaagttgccaatcggccagcactagccgatgtagaattcccaagattcaagccgatcatcagggacgatggagaaacaagcaccacccgccgatgcatgtcttttggagaagcagcatcggtcagcaccgtatgcaagttatcggctgaacctttcagggaacggttcaacaacttctatgatggatttccaagaaatgatagggtctggtttgcatatgaaggatctgccagctttgaactcctagatgactttcggtttgatgaaatcaactctgacatgtacgaaaaatccagggaagtgttcacaacagctattagcccttgcatcatccctattggcatccatcagggcaagaatatcaagatgacctatgaattctatcatccgacaagtgctgcaaggcaatttggcatgggtcagctgccaatcagcctattctttgccgataagatccaaagtagaggagagattacatcattccttatgatggatcggctgcagaacctaccaggaccacccttaggcagtattgaaaatatcaagctaaagacattcaggagtgcagcctttgaccgatgtcgccatccatgtatctcacaaacctttttccctgacgatgtccctcagacaacagaatcttctcctcctcaccaaagcataagtggtgtggaaattgaatatgctccagggctccttcccaatggtggtggactaacacctccagtcatcggctataatgcctccaagacttccacattgctgcacggcctacctcatgtgccgattgctcctgttgctggaagaaaaagagcaaaatcgactgctgcaccatcggctgtgaagaagaagcccaagaaccaaaagactactaccgacgatctgccagccattgatccagatgtagcagatttcctggaagatgaagcattgtccgaagaggtgaatgaagcggctgaacatattagtgaaactagggagcagactcctccagccgatccacctggccctcaaataacaccatcacctccggttcgccctacttaccagcccaggaaaaataagatagcttctaaaaaacctcaaggagcggctccactgtttccaactgatgctaacttgtactcaaatcttcagccccctcgaccttcaactcctatctttgaatcaagtgaaaacactccatcggctgtagaaagtcatcatgtggaggaagaagaagaagtagcagcaccagctcctactgtccctgttctagctgatatgttttcctttgacatcaggccattcttagatgaagaggaagaaacaacaagccaagctctggtgcccctagctgatgacatcaagacaactctaatggacatctcaaaaaggcttgaaggttctctggagaccttagtaacaagttgcggatccatccgagatagacttaatgaaatccatccaagatag</cdnaseq>

Protein Sequence

<aaseq>MELVTGGCFLRHLDELAKYVLIMLRADDGGKGSTFALYFLMYRH VCVGLLLPGAGAAGEELVVAGQCVDGAGVAAWAPQSAPPARSSWSRGSASMVRAWVSQ PAPPVRSSWSRGSASTVRAWAPQRRCPCQPCVRAGVAQCPAEAAAAAAARDVHGQRMH TLFFESIESASIPISTVEYVKLFLGPISNLDPTEFINGETNRIPLRFANRDLSTWKGT FKSWPSAETSWPAWYKRMLVSKSTHWDEIGISQALALTATNMARDEPMMSAATYFWST TMNAFLFSQGPMTPTLLDIVMITGLDITSSANLSSLNTQLTHEFKTRSIDGWGGYVAK NMGTGPVTPREHTAFLMMWLEKFLFCGPSYGPTANWQRVAENLVEKKHFPLGKYLLGY LYLTLNTAVDKMASGKTIGTGGPWWLLQTWLNLHTRKVANRPALADVEFPRFKPIIRD DGETSTTRRCMSFGEAASVSTVCKLSAEPFRERFNNFYDGFPRNDRVWFAYEGSASFE LLDDFRFDEINSDMYEKSREVFTTAISPCIIPIGIHQGKNIKMTYEFYHPTSAARQFG MGQLPISLFFADKIQSRGEITSFLMMDRLQNLPGPPLGSIENIKLKTFRSAAFDRCRH PCISQTFFPDDVPQTTESSPPHQSISGVEIEYAPGLLPNGGGLTPPVIGYNASKTSTL LHGLPHVPIAPVAGRKRAKSTAAPSAVKKKPKNQKTTTDDLPAIDPDVADFLEDEALS EEVNEAAEHISETREQTPPADPPGPQITPSPPVRPTYQPRKNKIASKKPQGAAPLFPT DANLYSNLQPPRPSTPIFESSENTPSAVESHHVEEEEEVAAPAPTVPVLADMFSFDIR PFLDEEEETTSQALVPLADDIKTTLMDISKRLEGSLETLVTSCGSIRDRLNEIHPR</aaseq>

Gene Sequence

<dnaseqindica>1..471#3268..3339#3474..4795#4830..4878#4956..5381#5448..5492#5529..5678#5762..5965#atggagcttgtcaccggcggctgcttcctccgccacctcgacgagctagccaagtacgtgctcatcatgctccgcgccgacgacggcggcaagggtagcaccttcgcactctacttcctcatgtaccgccacgtctgcgttgggctcctcctccctggtgctggcgccgccggtgaggagctcgtggtcgcggggcagtgcgttgatggtgcgggcgtggccgcgtgggcgccgcagtcggcgccgccggcgaggagctcgtggtcgcggggcagtgcgtcgatggtacgggcatgggtgtcgcagccggcgccgccggtgaggagctcgtggtcgcggggcagtgcgtcgacggtgcgggcgtgggcgccgcagcgccgctgcccatgtcagccatgcgtgcgagctggagtggcacagtgtcctgcagaggctgctgctgctgctgctgctcgggacgtgcatggtcaggtatcactcctctttaaataagcaaggagacaaaaggatcacgtccagacgggattccggtatgtagcattcccgcaagaaaaacggcatgttgccataaacagccctttagatacatcaccagcgagggaaaacccctgcctacgctttgcaactcaaagagaggctccattgccacagagatttcttgccagatttccactcattctcgattgccacacagagatttaccggcaaaactacatatccctcaaagatacgagcattacgctctttcaaattagccatgtcaccaagatgacgcccgcatcaaaaactctcctttcccgattcgtgattgctttgcgagcattgcaccaccaagcggggatattctccatcggcgttgagcaacgaagccccaaccgccctctgatacaactccacacttcttgtgtgtaggaataaccttgaaagatgtgagcacaagtctcttcctctctagagcagagatggcagatggaggcaagatgccaaccacgacgcaggttgtccgtagttaaacatgcacctttttattgagaaaaatatgaagaacttgcatctttctagagcactagacttcgcaataatcttcccaatgatgcaccgcgtgcacccagcagaaagcaatgagtatgccgacttgacggtgaattcgccattcgccgccggccaccaagaaaacacatcacgcgtcctaggctctagagttaggggagagacgtattcccagagtgcaaaaaattcaaccaaagcttgagctgagaggccacccctgatgtcatcgacccaactattgtcttgcaagctctccgccatcgatctcctcttgtcatggacaaacgaaaacagaatgggcatacaaaaggcgaacgaacttctaccaggaagccaattgtcggtccagaagagagccctctcgccattgcccagaagaactctgcaaccggccgctaggcagtgcgctaccctttatccattggcggtgccagatcagcccagggccgcaccggctgtcccctctataactgaaaggatcaattaggcctagagggggggtgaataggctaatttaaaacttaagaaaagtggaagcaagaagttttgaaacttccaaaatgattttcggaacttccgaaaatactcagagtagcgaaaaacaaagatgcaattctagatctagaagtctaccacaggataaacaaggcacaaacaacaactagaccaatagcggcataaacaagcaaagctagaggagagggatgaagaaatttcaccgagatatagctcacaaagttgttcccggagttcaaatccttgaggggattctactctccgttgaggagctattgatgtgaaaaacacacactggcctagaagatctgcttaacttcagtgcaggtccaaaatcttgcttttaggttcatgagtgtgccagttgatttgatcctgcaatcaacaagaaacaaagataagaaaaaccgtggttaaatacataaacgatagccgatcggccagtcgccgaagacatatcatttatcttcaagcagatgtcatatgtgaatcgatcggcagttataaataagcaagatgaggctaaatctactcgatcggctgtagatattaacgatatacaatccttctgtcgatgcatatttaaaccaagtattgggatagatcggtcgccatgtcgagacagtataaatcacttagatcgaaatatacattaacatgaagattataaacgtttatagcatagccgatcagatagatctagcatgtatcggctaatactccaatactactctatattaagatattaaaatagatagaatatatcaaacagaaccctaatatactttattgcgataagatcttaatataaagggcagatttagcatgtcaaacaagcatataagatataaaatggctaaaccaggtaagatcagctgaaaccccgatactatctctctcgataatcataaaataagccagatatcatataattatagatattacataatagatcaaactcaaccgatgcatcattaagcataaagacaagtatgagatctaggcaagatgatgaaaacctataagagatggtagatacacgatacaatctaaattaataatagaacataaccctatcgatcacttcccaacaataagaaatagccgataacaagttatatagcgcaactaatctagattacagcgtgtgtatgataactcgacggattacatgaataggattaaagtgtcataaagatggaagcattaaccccgagaacgcaagccgccataacaagttttacctctagttgaagatcgaatcgatgcagctcaacccgaaagcaagaactcgtcgaattaaaacgaaagtaaaaagggtggcgatgtgccgagattgtattgaactgttgttaattgattacatgggttcgggctctatttatacccgagatacaagatatgtccttgccgtacaattatctctaacaaactctaggatatcataagtctttgcggcagacttttgcccaaacatatctctaaggaatttacacgaaatatcctaattaatagatacaattgcctatttgagagctttatctccatcgtggcaatccctgtgaagcactttgatcgattctagaaagagccttgaaaccatctttatcagaatcagctgcatcacctctatcggctatatcggctgtcctctgtccgatccatctcagccgatgcagactccagccgatgcctttgcagcggatgcatactctgttcttcgaatcaatcgaatccgcctcgatcccaatatcaaccgtcgaatacgtcaaggtaagtacccatcggctaaaactcctttttttgcatcagattggttcttcctcctttctcaatcttcgatttctcctcttctgcaacatcttgctcatcaaatcgctgttcctagcattgccgacaatctttagctctttcttggcccaatcagcaatctagatcctactgagttcataaacggtgaaaccaaccgaatcccattaagattcgccaatcgagatctcagtacttggaagggtaccttcaaatcctggccatcagccgagaccagctggcctgcttggtacaagaggatgttagttagcaaatcgactcactgggatgaaatcggcatatcccaggctctggcgttaactgcaacaaatatggcaagggatgaacccatgatgtcagcagctacctatttctggtccacaaccatgaatgccttcctgttctcacaaggaccgatgaccccaactctactggatattgttatgatcactggtctagacattacctcgtcggctaacctgtccagccttaacacccaactcactcacgagtttaaaactagaagcatagatggttggggtggttatgttgccaagaatatgggaactgggccagtcaccccaagagaacacacagctttccttatgatgtggcttgagaagttcttgttttgtggtccaagctatggtccgactgcaaactggcaaagggtagctgaaaacctggtggaaaagaagcattttccccttggcaagtatctgctcggctacttgtatctgaccctcaataccgcagttgacaagatggcctctggaaaaacaatcggcacaggaggtccatggtggttactccaaacttggctaaacctgcacactagaaaagttgccaatcggccagcactagccgatgtagaattcccaagattcaagccgatcatcagggacgatggagaaacaagcaccacccgccgatgcatgtcttttggagaagcagcatcggtcagcaccgtatgcaagttatcggctgaacctttcagggaacggttcaacaacttctatgatggatttccaagaaatgatagggtctggtttgcatatgaaggatctgccagctttgaactcctagatgactttcggtttgatgaaatcaactctgacatgtacgaaaaatccagggaagtgttcacaacagctattagcccttgcatcatccctattggcatccatcagggcaagaatatcaagatgacctatgaattctatcatccgacaagtgctgcaaggcaatttggcatgggtcagctgccaatcagcctattctttgccgataagatccaaagtagaggagagattacatcattccttatgatggatcggctgcagaacctaccaggaccacccttaggcagtattgaaaatatcaagctaaagacattcaggagtgcagcctttgaccgatggtggatagaatggaaaaaacatctgtttcatcagtcgccatccatgtatctcacaaacctttttccctgacgatgtccctcaggtaaaaatcctcaccttcaattaattttatcaaccgcaagccgatgtattaacttatgtgattcttgtttcctgcagacaacagaatcttctcctcctcaccaaagcataagtggtgtggaaattgaatatgctccagggctccttcccaatggtggtggactaacacctccagtcatcggctataatgcctccaagacttccacattgctgcacggcctacctcatgtgccgattgctcctgttgctggaagaaaaagagcaaaatcgactgctgcaccatcggctgtgaagaagaagcccaagaaccaaaagactactaccgacgatctgccagccattgatccagatgtagcagatttcctggaagatgaagcattgtccgaagaggtgaatgaagcggctgaacatattagtgaaactagggagcagactcctccagccgatccacctggccctcaaataacaccatcacctccggttcgccctacttaccagcccagggtatgtctatttttacccattgcttctatacttttaaagccgatttctgattttgtacttctgcagaaaaataagatagcttctaaaaaacctcaaggagcggctccactggtaaacttccctaattctgtcaattctcttttttagtttccaactgatgctaacttgtactcaaatcttcagccccctcgaccttcaactcctatctttgaatcaagtgaaaacactccatcggctgtagaaagtcatcatgtggaggaagaagaagaagtagcagcaccagctcctactgtccctgtaagtatatacctaaggtctgaaaatcatatcggctactatctctcttttcaatccacaatctcaatgtttctctctttcaggttctagctgatatgttttcctttgacatcaggccattcttagatgaagaggaagaaacaacaagccaagctctggtgcccctagctgatgacatcaagacaactctaatggacatctcaaaaaggcttgaaggttctctggagaccttagtaacaagttgcggatccatccgagatagacttaatgaaatccatccaagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0353500, RefSeq:Os09g0353500