BGIOSGA017958

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Revision as of 02:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017958| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017958, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA017958

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017958, complete gene.

LocusTag

OSJNBA0020H14.16

Ensembl Transcript ID

BGIOSGA017958-TA

Ensembl Protein ID

BGIOSGA017958-PA

Length

3009

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23062528..23065536

Sequence Coding Region

23064913..23065536,23064328..23064627,23063763..23063853,23063309..23063433,23062958..23063050
,23062755..23062814,23062528..23062653

Genome Context

<gbrowseImage1> name=IndicaChromosome05:23062528..23065536 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:23062528..23065536 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTACGCAGCTAGTGTTTCCCAGTGCTTCCAATGGCGGATGCCCATTGGGCGTTTCGCGGAACAATTTTAGGAAAGTGGTTCTGGGCGTCGGTGCGGGGCATCTCCAGGGAAAGAAGTGCTTTTCTGGTGGCTCTTCCCGCCCTAGCAAACTCGAGTGCTCTGCAAACTCGCGGCGAGTTGGGCCACGGCGCACCAAGGATGCCCTGTATGACCTCCACCCTGAGATCTCGATGCTGTATGGAGAGGATAATGGTGCAGTTGCTGCCCCGGGCAAGGAACAGGATATTGTCAAGACCACCGAGAGGCTGGAAGATGTATCTGCGTCGCACCGCTACAGTGAGCCGAGGATCAAAGTCATTGGCGTTGGAGGTGGTGGATCCAATGCTGTGAACAGGATGATTGAGAGCGACATGAAGGGGGTGGAATTCTGGATCGTGAATACTGATTTTCAGGCTATGAGAATGTCACCCATTGATCCGGATAATAAGTTGCAGATCGGCCAGGAGCTAACACGAGGTCTTGGTGCTGGTGGGAACCCGGAAATTGGCATGAATGCAGCCAAGGAAAGCCAGGAGTTGGTAGAACAAGCAGTTTCTGGTGCTGATATGGTTTTTGTGACTGCTGGAATGGGAGGAGGGACAGGCACAGGCGGGGCCCCAGTTATAGCAGGGATTGCAAAGTCCATGGGTATATTAACTGTTGGAATTGTGACAACCCCGTTTGCATTTGAGGGAAGGAGGCGTGCACTACAGGCGCAAGAAGGAATTGCGTCCTTAAGAAGCAATGTTGATACACTGATTGTAATTCCAAATGACAAATTGTTGACTGCTGTTTCTCCAAATACTCCTGTGACAGAAGCATTTAATTTGGCAGATGATATACTTCGGCAAGGTGTCCGTGGAATCTCAGATATAATCACTGTGCCAGGTTTGGTCAATGTTGACTTTGCTGATGTCCGATCAGTTATGTCGGATGCAGGGTCATCTTTGATGGGCATTGGAACTGCAACAGGTAAGACACGTGCCAGGGATGCTGCGCTTAATGCTATACAGTCTCCTCTTCTTGATATTGGCATTGAAAGAGCAACAGGAATTGTATGGAATATCACTGGAGGGAATGATCTAACCTTGACGGAGGTGAATGCAGCAGCTGAAGTGATATACGATCTTGTTGATCCTGGTGCAAATCTCATTTTTGGCTCTGTTATTGATCCATCGTATACTGGTCAAGTGAGCATAACCCTGATTGCAACTGGATTCAAGCGTCAGGAGGAGGCTGAGAGTCGACAGGCTGGTGGAGATAACAGCCGGAGCCACAGCAGTTGGTTTTCTTCATCATCCCAGGAAGAAGGCCCAACATTGCAGATCCCAGAGTTTTTGCAGAGGAAAGGGCGTTCAGGGTTTTCCAGAGGCTGA</cdnaseq>

Protein Sequence

<aaseq>MSTQLVFPSASNGGCPLGVSRNNFRKVVLGVGAGHLQGKKCFSGGSSRPSKLECSANSRRVGPRRTKDALYDLHPEISMLYGEDNGAVAAPGKEQDIVKTTERLEDVSASHRYSEPRIKVIGVGGGGSNAVNRMIESDMKGVEFWIVNTDFQAMRMSPIDPDNKLQIGQELTRGLGAGGNPEIGMNAAKESQELVEQAVSGADMVFVTAGMGGGTGTGGAPVIAGIAKSMGILTVGIVTTPFAFEGRRRALQAQEGIASLRSNVDTLIVIPNDKLLTAVSPNTPVTEAFNLADDILRQGVRGISDIITVPGLVNVDFADVRSVMSDAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGNDLTLTEVNAAAEVIYDLVDPGANLIFGSVIDPSYTGQVSITLIATGFKRQEEAESRQAGGDNSRSHSSWFSSSSQEEGPTLQIPEFLQRKGRSGFSRG</aaseq>

Gene Sequence

<dnaseqindica>1..624#910..1209#1684..1774#2104..2228#2487..2579#2723..2782#2884..3009#ATGTCTACGCAGCTAGTGTTTCCCAGTGCTTCCAATGGCGGATGCCCATTGGGCGTTTCGCGGAACAATTTTAGGAAAGTGGTTCTGGGCGTCGGTGCGGGGCATCTCCAGGGAAAGAAGTGCTTTTCTGGTGGCTCTTCCCGCCCTAGCAAACTCGAGTGCTCTGCAAACTCGCGGCGAGTTGGGCCACGGCGCACCAAGGATGCCCTGTATGACCTCCACCCTGAGATCTCGATGCTGTATGGAGAGGATAATGGTGCAGTTGCTGCCCCGGGCAAGGAACAGGATATTGTCAAGACCACCGAGAGGCTGGAAGATGTATCTGCGTCGCACCGCTACAGTGAGCCGAGGATCAAAGTCATTGGCGTTGGAGGTGGTGGATCCAATGCTGTGAACAGGATGATTGAGAGCGACATGAAGGGGGTGGAATTCTGGATCGTGAATACTGATTTTCAGGCTATGAGAATGTCACCCATTGATCCGGATAATAAGTTGCAGATCGGCCAGGAGCTAACACGAGGTCTTGGTGCTGGTGGGAACCCGGAAATTGGCATGAATGCAGCCAAGGAAAGCCAGGAGTTGGTAGAACAAGCAGTTTCTGGTGCTGATATGGTTTTTGTGACTGTAAGTCTGTGCTGCTCATGTAAATTATATTATTTTCTGTTGCTTGATTGATAAAGAATGGCATGATTCTCTTGGTGTTTTTTTTGGGGAGATTTAGCGCATATATGAATTGATCTATGTATGCGCATATATAAATTGATCAATGTATGTAAGTTGAGTCATAATATGCTAGGGCAATATCTTCTGTTCGATTTACATCTCCATGTACCAAAATATAAACTTTTCTCTTCTTTAGTTGGAAGGAGTACGTTGTGCTCTTCATTGATCCTTTGAATTCATTTTTAGGCTGGAATGGGAGGAGGGACAGGCACAGGCGGGGCCCCAGTTATAGCAGGGATTGCAAAGTCCATGGGTATATTAACTGTTGGAATTGTGACAACCCCGTTTGCATTTGAGGGAAGGAGGCGTGCACTACAGGCGCAAGAAGGAATTGCGTCCTTAAGAAGCAATGTTGATACACTGATTGTAATTCCAAATGACAAATTGTTGACTGCTGTTTCTCCAAATACTCCTGTGACAGAAGCATTTAATTTGGCAGATGATATACTTCGGCAAGGTGTCCGTGGAATCTCAGATATAATCACTGTAAGAAAATATGTTGCACCTTAACAACTCATGGCACTATGGATTAGCGAACCCCCATGAAGTACATTTTTGTTACATATTGAAATCATGCTACTAGAGTCGTTAAATTTTCTGTTTCCTTAGCTACATTGATGTCCCAGTGGTTTGTTGTCGCTGATGCCTATATTTCGATAGTCAAAACTACAAGTGAGAGTAATCATCTGAATTCCAATTATCGTCTTTAATTTACTGGTACTGATACGAGTGAGAGTAGAATATCAGTGATGACTATCGTGATAAGTTCCTTGATCCTGTCCATAGCCATCCTTTATGTTTAGTCATTCACTGCTTGTCATGCTATCTGCATTACCAGCTCATGGGTCTGAAAGTTTAAACAATTTGTAGGATATCCTTTGCCAATATGCTCACCAAATGACAATTCATGTGATACATTTAGATTACTGGTAATTTACTGCTATATTCTTTTGCTTGCAGGTGCCAGGTTTGGTCAATGTTGACTTTGCTGATGTCCGATCAGTTATGTCGGATGCAGGGTCATCTTTGATGGGCATTGGAACTGCAACAGGTTGGATTTCAGAAAGCATTATGTGTTCAGCTTCAGCATCAAATAGCATAAAGGGGGCACTCCACATATATTCCTATCGCATGGGTTCATTTACAGAATTACAGTGCTTTTTACGGAATTCCCAAGCATGCGTAGTTAGAGTTTATGTTAGCTGCATTTATTTGATGCTTCTAAGAGATACAGTATAAGGTTATATGGGATCCTACTACCGCTGAGGTGATATTTACAATCATCAGAGTGCCCTCCCCCAACACACACACACACACACACATATGATACCCTTGATCTCTGATTGTTTTCCCCTGATGATCCTTATGCCCTCTTTGCAGGTAAGACACGTGCCAGGGATGCTGCGCTTAATGCTATACAGTCTCCTCTTCTTGATATTGGCATTGAAAGAGCAACAGGAATTGTATGGAATATCACTGGAGGGAATGATCTAACCTTGACGGAGGTATTGCAGAGTAGTTTGCTATTGCATTCTTCTGGTACAAGTTGCTTGTTTGATTAGATCTTGATTTTTTTAATGGCTAAGTAGTTTAGCTGCTAACCGCAGGTAGCAGACCTCATTTTCTAAGTTTGGTAATAAATAGGCCTTTATTGCCTTCAGTTTATGCTGACTATTTAGATGACATAACACATCACAGAATTGTGATATGACTTCTTAAATTATATATTTCTGCTAAATTCCACTGGTATTCCTTTGTTTTAGGTGAATGCAGCAGCTGAAGTGATATACGATCTTGTTGATCCTGGTGCAAATCTCATTTTTGGCTCTGTTATTGATCCATCGTATACTGGTCAAGTAAGCAACCATATAAAAAGAAATAGGGGTAGTATTATTTTTTAATCAAAAGCTATGGTGGTGATTATGCCATCCATTTTTCTAGAGGTCATTGAATTTACCACGCTATTGCCAAATACAAGTATTATTATCCCCTTATCCAGGTGAGCATAACCCTGATTGCAACTGGATTCAAGCGTCAGGAGGAGGCTGAGAGTCGACAGGTACATTCTACATTGTTATGCCTACTTTATGCCCACTGCCATTATGTATTCTGATGTTCTTCATTCTACTCTCCCTTGCGTCAAACATCGACGACTGTCAGGCTGGTGGAGATAACAGCCGGAGCCACAGCAGTTGGTTTTCTTCATCATCCCAGGAAGAAGGCCCAACATTGCAGATCCCAGAGTTTTTGCAGAGGAAAGGGCGTTCAGGGTTTTCCAGAGGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017958