BGIOSGA017959

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Revision as of 02:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017959| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017959, complete gene.| tag = B1110B0...")
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Gene Name

BGIOSGA017959

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017959, complete gene.

LocusTag

B1110B01.19

Ensembl Transcript ID

BGIOSGA017959-TA

Ensembl Protein ID

BGIOSGA017959-PA

Length

5487

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23056414..23061900

Sequence Coding Region

23061824..23061900,23060719..23060851,23059937..23060587,23059657..23059777,23058910..23058991
,23056414..23056870

Genome Context

<gbrowseImage1> name=IndicaChromosome05:23056414..23061900 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:23056414..23061900 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTTCCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGATGGAGGGTGTGTACCGCTTGCTCTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAATGCAGTATGAGAGAGATGTGTGCACTGCTCTTGGAACAACAAAGTGGCAGTTGGAGCAATTTGAGCGAGAAGTGAATGCAGCGGCATTGTCTAATAAGTCAAATTCAAGGGAAAATGCCATCTTGCAATTTAGGCAATTTATTAGAGCTATAGCGGAGCAAATTTCTCAGGTGGAAGATAGTTTGGAGAGTCTTAGGAATGATTCCATTAGAACACCAAAACATTCATACTTGACTGAACATGATGGAGATGAATTGGCATCTTTTCTTTCTGGTAGTAATAGAAAGGATAATCATGTGATTTATTCCACTGGAACAGATGAAATTGTTGAGCTGAAGCTTGATAGTGTTCCTGCAGTAAATGGTTATCATTCCACCCAAGAACGTACATCATGTGAATTCAGATATTCAGGAGAAGATGTGGAAGGAGCAGCCAAGCCTCAATGTTCATGCGGGGAAAATGCATGTGAAGGAGATCATAATGGTAGCAGTATGCGTGGTTTGGATTCTGATGATTCAATAGGTAGGAAGCATCATTTCAGGAGCAAACTGAGCAGGAAATACCACAGTTTTATGCGGAATTTATGGTTTACAAATAGAGGACGTGAGAGTTTTACAAAGAGGAGGAAAGATGGAGAAGTTATGGATAGCTTGAGAAATGGAAGTACATTACCTTCATTCAATCTACCTCCAGCTGGAAGGGCTATGTATTTCTGGCCTGAGCTTATCAAGAGGAGATTAAGTAAATTTAAATGCTCTACACATCACAAGCATCTTCAAGTCCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTTGCACAATCAAGTAATCAACCATTGTCTGATCAGACTATCGAGATGGCAACTGCAACTGCTCCGAGATTGTGCTTTCCTAAACCCGGCGCGGCCATTGCTCCGGCGACCAAGAGCCCTTCCTTCATTGGTTACGCAAAGCAAACATTGAACATGTCAGGCCTAAGGATCTCCAACAAGTTCAGGGTGTCCGCGACAGCGGTGCACAAGGTAAAGCTTATAGGCCCGGACGGTGTCGAGCACGAGTTTGAAGCCCCTGAAGATACCTACATTCTGGAGGCCGCTGAAACTGCCGGGGTGGAGCTGCCATTCTCATGCCGTGCTGGATCATGCTCCACATGTGCGGGTAAGATGTCATCGGGAGAAGTTGATCAGTCGGAAGGATCCTTCCTCGACGAGAACCAGATGGGCGAGGGATACGTTCTGACATGCATTTCGTACCCTAAGGCGGATTGCGTCATTCACACCCACAAGGAGGAAGAACTCTACTAG</cdnaseq>

Protein Sequence

<aaseq>MAEGFGRWEADPLFPAAECVQDSADRMEGVYRLLLHERKLIQDDTSHTKRRVSMQYERDVCTALGTTKWQLEQFEREVNAAALSNKSNSRENAILQFRQFIRAIAEQISQVEDSLESLRNDSIRTPKHSYLTEHDGDELASFLSGSNRKDNHVIYSTGTDEIVELKLDSVPAVNGYHSTQERTSCEFRYSGEDVEGAAKPQCSCGENACEGDHNGSSMRGLDSDDSIGRKHHFRSKLSRKYHSFMRNLWFTNRGRESFTKRRKDGEVMDSLRNGSTLPSFNLPPAGRAMYFWPELIKRRLSKFKCSTHHKHLQVRLATVLLIALAVLELPREYTMYCIGLFVILAQSSNQPLSDQTIEMATATAPRLCFPKPGAAIAPATKSPSFIGYAKQTLNMSGLRISNKFRVSATAVHKVKLIGPDGVEHEFEAPEDTYILEAAETAGVELPFSCRAGSCSTCAGKMSSGEVDQSEGSFLDENQMGEGYVLTCISYPKADCVIHTHKEEELY</aaseq>

Gene Sequence

<dnaseqindica>1..77#1050..1182#1314..1964#2124..2244#2910..2991#5031..5487#ATGGCGGAGGGCTTCGGGCGGTGGGAGGCGGATCCGCTCTTCCCCGCCGCCGAGTGCGTGCAGGACTCCGCCGACAGGTCCGTGTGCTTTTCCTTTCCTTAACGTTCTTTCTCTGTTTCTCGATCTGTGGCTCTCTGCTAGAATTGTGCGCGTACTTTGGTTTACAAATCTCGGGGGGAATATGCCAAGAAATGTGTAGTTGGAAGGATTCGCTGCGTGCTCGACGGGATTACGTGGCTCCTGTTCTGGAGCACGGGAATTCTTCGATGCGGTTTGTTCCGTTCATGTGAATCTGCGTGGATTACTGGATTGGCTTCTGCGACTAGGAGATGCTAGGCTGGGAATTGGTGGCAAATGGCAGACAACGTTTTGTTTCCCAGAGTTTCATGGCCGTCTTTCGGATGGGAGATTCTGGAGATGTCAGCTTGGATGGGCACGCTCCGTCAGGATTGAGCATTGTTTGGGGAATAATATGCAACTTCACTCAACTTTGAGAAACTTCTCTTATTTTGGGGCACGCCTTTCTGGGATGCATGAATGACTGTCTTTCTGTTGCACGAGCTTAGCATAATGGTAGCATGTGCCTATAACATTTTTTCCATGTAAATAGGAGTTGTATAAATTGAAATTAATCATGTTTTGTCGTTGTGGTGCTAGTCTTGTGTTTGATTATCATTTACCTTATAGCAAAACCTGGTTTGTTACCGTGGTAAATAGTAAATACTAGCCATCAACTTATGTGTCTATGTTCCACCTTTCTATGGGAGTTGAATTTTGTATTTTAGTTCTAATAAGAGGTAACCTATACGCCTCCACATGGTACCACCGTACCAGCCAAATCTAAGTGTTTTCTCCATATGCACTTTTTTGCACTGTCATGCAAATAGTATAGATTTTTCTCTCTGTCTTGATCAAGCTAGGAGTTATAATGAATTTTCTGTCTTGGTTAGTGTAAGAGCAATTAGTGAATTACTGACCCTACAAGTAATGTATACAAATAAGATCCTTTTCTAACAAGAAGTTATAACCATAATTTTGGATTGGGACAGGATGGAGGGTGTGTACCGCTTGCTCTTGCATGAAAGAAAACTGATACAAGATGATACCTCACATACAAAACGTCGTGTATCAATGCAGTATGAGAGAGATGTGTGCACTGCTCTTGGAACAACAAAGTGGCAGGTTTGCATAGTCAAGCTCTCCATTTTTAACATATTTTTAATCATTCTTATCCATATATCATATGTTTTTCGGGTTATCCGTCCACTTCTGCATTTAAAGTTCTAAGGTCTTTATTCTCCTAAAACTGGCAGTTGGAGCAATTTGAGCGAGAAGTGAATGCAGCGGCATTGTCTAATAAGTCAAATTCAAGGGAAAATGCCATCTTGCAATTTAGGCAATTTATTAGAGCTATAGCGGAGCAAATTTCTCAGGTGGAAGATAGTTTGGAGAGTCTTAGGAATGATTCCATTAGAACACCAAAACATTCATACTTGACTGAACATGATGGAGATGAATTGGCATCTTTTCTTTCTGGTAGTAATAGAAAGGATAATCATGTGATTTATTCCACTGGAACAGATGAAATTGTTGAGCTGAAGCTTGATAGTGTTCCTGCAGTAAATGGTTATCATTCCACCCAAGAACGTACATCATGTGAATTCAGATATTCAGGAGAAGATGTGGAAGGAGCAGCCAAGCCTCAATGTTCATGCGGGGAAAATGCATGTGAAGGAGATCATAATGGTAGCAGTATGCGTGGTTTGGATTCTGATGATTCAATAGGTAGGAAGCATCATTTCAGGAGCAAACTGAGCAGGAAATACCACAGTTTTATGCGGAATTTATGGTTTACAAATAGAGGACGTGAGAGTTTTACAAAGAGGAGGAAAGATGGAGAAGTTATGGATAGCTTGAGAAATGGAAGTACATTACCTTCATTCAATCTACCTCCAGCTGGAAGGGTGTGTTATATCCTATATTTGCTTTACTTCCTGGTTGCTTATATATCAAAATAGCACAATCTATCTACTATTTTAGCATAATAACAAGGCTGTACTCCTATAAGGAATATTGATTTCTTTTGATTTCTCACGTAATAACTAACAACCTTTTTTTTGCAGGCTATGTATTTCTGGCCTGAGCTTATCAAGAGGAGATTAAGTAAATTTAAATGCTCTACACATCACAAGCATCTTCAAGTCCGTTTAGCAACAGTACTACTAATTGCCCTTGCTGTACTTGGTGAGTTGCACCAAAGCCATCTGTTCTTGAGCATTTCTGATGATTAACCATTCTGCTATTTGAAAAAAAAAAAGATAATTTTCAACTTTCAAGTAGCATACTATGTTTTGCATCGCAGTGTTTGGCAGTTTTAATACCTGAAAAAAAATAAATGGAACTGTTTGGTGGTTTCTTGCAGTCGATGCATCCAATTAGTATTTCTCTTAGTGTCCATAATGTTCTGTTCAAATCTTTGCAATAGTTAGTGGTAGTATACCTGGAAACTGGAAATGCAAGCACCAAGGTTGTAAACTCTAACACCATGGACATTCTGTATCATAACCTGCATCAAAACAAGATAGTATTTTTAATGAAGTGTAAGGTTCTCCATCTGAAATGATTTTGCACATGCTGCAGGCTTGCTGGTTTTGCATGTGAGATGACTGGGAGCAGTATCCGGTTTTGGTCCCTGTTGTGTACGTGCCAATCGCCATGTTGCACTGTACCAATCAATCATTTTCATAGTTCCTGATGGAGGAGGATCCGTGTGCTATTGAGCACCATTTGCTATTTTATATTGCCATTCGAGGGAGACATAGGTTTGCCGTCATTTGATTGCTCCTAAGTAGCCTGGACCAGCACTGACATGAGCTGTGATTTTCCACAAATCCACATTTTTTGTTCAGAACTGCCACGTGAATACACGATGTATTGTATTGGCTTGTTTGTGATACTTGCACAATCAAGTAATCAACCATTGTCTGATCAGTAAGATGACAAAGTCTTCTCCAGATTTTTACGGTAGCAATCCTGTTAATATATTCCACCCAGAGAAAGGTGCACTCTAATGTAATGCCAACTGTAGCATAACCTAGGGGCTCTGTAGCTGGTGAAGTTCTCAATTCCGGTCAGCCACAGGAGATGTCAGATGTGCTATTTGTGTATGTGTTCCAGTTTGATTCCCTGATTGAACCTGCAACTTTGTGGCTGCAAAAAGATTGCAGCACTTGAATCGAACTGGATTCAATGTACAAGTTCGTGTGCTCGTTCGTGGCTGTCCCTGTTTTGTTCTTAAATTTGCTTGTTTCTGGCTTGTGGGCGTGCAACTCCACTCTAGTAGTCATTTTTTTAAGAACTCATACACTTTATTTGTTTGAACAGAGTTTAGAAACAGATAGGATCAGTTATGGTTACATCTCCCTTAGGAGTATTGAGAATGCCTCTTGTACTCCTATGTCGATTCATCTTAATAAGTTTCGCTTTCCGTTTTGTTCGTTCGACGTGCTAAGCCGAGAGCTATCGCCTTTTCGCGATCACAAAGTTCTTTTAAGGGTGTGTTTATTTCGTGAAAAGAAAATTTTTGGATGTCACATCGGATGTTTGATCGGATATCGGAAGGGGTCTTAGGATACAAATTAAAAAACTAATTTCATAACTCATCTGGAAACGTGAGACGAATCTTTTGAGCCTAATTAATCCGTCATTAGTACATATGAGTTACTGTAGCACTTATAGCTAATCATAGACTAATTAGGCTCTAAAAATTTGTTACGTGATTTCCATGCAAATTGTGCAATTATTTTTTGTTTTTATCTATGTCAAAAGATTCGACGTAACGTTTTTAGGAAAAAAATTTTGGAACTAAATCAGACCTAAAGAAAAATTCGACAGAGATCAGTGAGATGGCTGCGAAGGTACCTGTGGGCTGTGGTCACCGGCGCGTGGGTCCCTCTGTCAGATGTTTTCCCTTTGGGAACACTGGGCCCATCTGCCAGTCCCAATACCGTCCTCCCGCCCTACCAAGGGCCGCGCCGCCGCCGCGCCCGCCGCACGCACAGGCCGCACAGCCAGCGTAAACCAATTAGCCAAACCTAAAAAAAAAAAGATAATAAAGGAGAAAGTAATCAAGTCGTCTTGGCAGCAAAAAGACCTTTTGGTTCTGTACGGCCTTTCGCCCACGCCGCCAGCCACACGGCCCAACCGCCCAACGCGAGGTCGAGGCGTGAGCCAGCCAAGCCGGAGCCGGAGCCGGAGCCGCGCGAGAGCAGAACGAGCCTCCTATTTAATACGGCCCTGCACTGCAGTGCACCACCCATCTCACTCGACTCGGCTTGACCCAACCCAACCTACCTCGCGATCCCCCCCTCCGCCGCCGTCTCGGAGAGAGAGAGAGAGAGAAGGTACGCCTCGGTTGATCCGCCACCTTCTTCTTCTTCTTACTTACCCTCCCTTCTGATCCCCCGCTCCGCCTGTTTCCCCTGGTCATGGCGGCGAGATCTCCGTGTAGGAGTGAGATCGCCGCCTCCTCCTCATGGTGTTTCCTGGTGCGGCGCGCGTGAGAGCTCGGCCCGAGCCCGAGCCCTCTCGCTTTTGCCGTGCCGGATCTGATTCTGTCCGTGCTAGTGTTAGTGTCACGTTTTGGTGTAGACAGTAGACTCATGAAACGAGGAGAGGCTTTTTTGTAGGATGGGTCAACTTTTAGGAACTTGTCCAAAGTTTAATAACTCTCAAGGATGAACTGGGAATAGTGGCGCTGTTATACATTAGGAGTTGGTCTGCGAGAAATTTGGATGGGATTAGTTGCGGATCTTCCATCAGCTAGTGGAGCTTAAAGATACTGGTGTGTTGTCCGTACTGAAATGCACTTCTTTGCCTTGGCAAAACCCCAGTCTCCCCCATAAATTTAGTTTTGTTTGCTTAGCTTTACCAAATGCCATCAGCATACATGGTGTAAAATCATATACTTTTGTAACGAACGAATTGTGTTTATTTGCATTTCAACTAGTGCTTTCTTCCTAATTTATCAGGACTATCGAGATGGCAACTGCAACTGCTCCGAGATTGTGCTTTCCTAAACCCGGCGCGGCCATTGCTCCGGCGACCAAGAGCCCTTCCTTCATTGGTTACGCAAAGCAAACATTGAACATGTCAGGCCTAAGGATCTCCAACAAGTTCAGGGTGTCCGCGACAGCGGTGCACAAGGTAAAGCTTATAGGCCCGGACGGTGTCGAGCACGAGTTTGAAGCCCCTGAAGATACCTACATTCTGGAGGCCGCTGAAACTGCCGGGGTGGAGCTGCCATTCTCATGCCGTGCTGGATCATGCTCCACATGTGCGGGTAAGATGTCATCGGGAGAAGTTGATCAGTCGGAAGGATCCTTCCTCGACGAGAACCAGATGGGCGAGGGATACGTTCTGACATGCATTTCGTACCCTAAGGCGGATTGCGTCATTCACACCCACAAGGAGGAAGAACTCTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017959