BGIOSGA017960

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Revision as of 02:27, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA017960| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA017960, complete gene.| tag = B1110B0...")
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Gene Name

BGIOSGA017960

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA017960, complete gene.

LocusTag

B1110B01.17

Ensembl Transcript ID

BGIOSGA017960-TA

Ensembl Protein ID

BGIOSGA017960-PA

Length

2589

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23051240..23053828

Sequence Coding Region

23053756..23053828,23051765..23052822,23051240..23051290

Genome Context

<gbrowseImage1> name=IndicaChromosome05:23051240..23053828 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:23051240..23053828 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCTGCGCCGTCTTCTTCTCCTCGGCCTTCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCAGCAGCCAATGACGTCGTCGTGTCGGCGGCGACGTCGCCGCCGCTCAAGTTCGGGATCAACTACGGCCAGATCGCGAACAACCTGCCGCACCCGACGCAGGTGTCCGGCCTCCTCCAGTCGCTGAGCGTCAACCGGGTGAAGCTCTACGACGCCGACCCGGCCGTCCTCGCCGCCTTCGCCGGCACCGGCGTGGAGTTCATCGTCGGCAACGAGGACCTCCACAACCTGACCGACGCGCGCAAGGCCCGGGCGTGGGTGGCGCAGCACGTGCAGCCGTTCCTCCCGGCCACCCGCATCACCTGCGTCACCGTCGGCAACGAGGTGCTCTCCGGCAAGGACACGGCGGCGATGCAGAGCCTCCTCCCGGCCATGCAGTCCGTCCACCAGGCGCTGCTCGACCTCGGCCTCGCCGGCAGGGTGAACGTCTCGACGGCGCACTCCGTCAACATCCTCGCCACCAGCTACCCGCCGTCCGCCGGCGCGTTCCGGGAGGACCTCGCGCAGTACATCCAGCCGCTGCTCAACTTCCACGCCGAGGTCGGCTCGCCGTTCCTCGTCAACGCCTACCCGTTCTTCGCCTACAAGGCGAGCCCGGCGAGCGTGTCGCTGCCGTACGTGCTGTTCGAGCCCAACCCGGGCGTACGCGACCCGGCCACCAACCTCACCTACGACAACATGCTGTACGCCCAGATCGACGCCGTGTACGCCGCCATGAAGGCCATGGGCCACGCCGACATCACCGTGAGGATCTCCGAGACCGGGTGGCCGTCCAAGGGGGACGACGACGAGGTGGGCGCCACCCCGCAGAACGCCGCCGCGTACAACGGCAACCTCATGAAGCGGATCGCCGCCGGGGAAGGGACGCCGCTCAAGCCGGCCGTCCCCGTCGACGTGTTCGTGTTCGCGCTCTTCAACGAGGACATGAAGCCCGGCCCCTCGTCGGAGAGGAACTACGGCCTGTTCTACCCCAACGGCACGCCGGTGTACAACATCGGCTTCGACGCCGCGTCCTTCAGCCCGTCGCCGACGACATCCACGTTTTCCTCCTCTTCCAGGCCAACGAGTACATTTCTGATGGGGGTGGTTGTCCTACTCGCCGCATTCCTCCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MELCAVFFSSAFSLLLLLLLLLSAANDVVVSAATSPPLKFGINYGQIANNLPHPTQVSGLLQSLSVNRVKLYDADPAVLAAFAGTGVEFIVGNEDLHNLTDARKARAWVAQHVQPFLPATRITCVTVGNEVLSGKDTAAMQSLLPAMQSVHQALLDLGLAGRVNVSTAHSVNILATSYPPSAGAFREDLAQYIQPLLNFHAEVGSPFLVNAYPFFAYKASPASVSLPYVLFEPNPGVRDPATNLTYDNMLYAQIDAVYAAMKAMGHADITVRISETGWPSKGDDDEVGATPQNAAAYNGNLMKRIAAGEGTPLKPAVPVDVFVFALFNEDMKPGPSSERNYGLFYPNGTPVYNIGFDAASFSPSPTTSTFSSSSRPTSTFLMGVVVLLAAFLL</aaseq>

Gene Sequence

<dnaseqindica>1..73#1007..2064#2539..2589#ATGGAGCTCTGCGCCGTCTTCTTCTCCTCGGCCTTCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCAGCAGGTAGGGATACTCATGGCTCCTTCGTTTCATTCCATTCGTGCGTTCCTTGCGTGTTTTTGTCAGTGTGGATCATATGGAAGACTGAAACACAAGGATCAAGGATCGATGGTTTAGTTCCTTGTGTTCTCTGTTTCTTCTTCTCCTTCTCGTTTCATTTCGAAGAGACCATTGATGGCTTGGAGCGCTTTGAGTGCAGTTTTAAGAATTTAAGGGTGTTTACGCAAAAAAAAAAATAGAATAAAGGAGAGTAAATTTGAGCGTGGAGAAATGCGACCTTTGTACTACCGTGCAAAACAGCTGTGCTGGTGTTATCGTCTACAGGAAGTGAAAAACAGTGAATTGAATCAATTGATGATGATGCAGTTGTCTACAATGAGCCTATGAGGTCGTTTTCTTCGATTAATCAAGCATGTTTCAGGCGGCTGGTCCGACGTGTACTGGATAGTGAAAACATTGAATATTCCGCACCACGCGGTGATCCTGATCCTTTTGCTGAAAGTTTTCACGGCCATTTGATTTGACATTGTTTGATATTTTTTTCTCCCTTTGATTGCAAGCTCCGTGTTTCTGCTCGTCGAAAACGACCTCCTACCCAAGATCATTTCATGTAGTTTAATTATGTGATAGGGAAACTTCCCCCCTGGATTAACTTCTTACTATCTCTTACGATATTTCGAATGACTGGTTAAAAAAAAGATATTTCAAATGCCTTGCTGATTATAGCAATTAACTGAGCTTGAAATGGTAAGCATCATGTTCAGACATGATAAGCTCTCTTTCCCTGACAAAAACAAGTTCCATTTTTTTTTCTTTTTACGTAACTGGCATAAAAACAGGTTAAATGTTGCCGATGCAGCGCTGCTATACAAAAATGCAAGTGTAAATTTCATTTATCATTTCTGCCCTCCTTAATCTTGGTATTAATCACCGCAGCCAATGACGTCGTCGTGTCGGCGGCGACGTCGCCGCCGCTCAAGTTCGGGATCAACTACGGCCAGATCGCGAACAACCTGCCGCACCCGACGCAGGTGTCCGGCCTCCTCCAGTCGCTGAGCGTCAACCGGGTGAAGCTCTACGACGCCGACCCGGCCGTCCTCGCCGCCTTCGCCGGCACCGGCGTGGAGTTCATCGTCGGCAACGAGGACCTCCACAACCTGACCGACGCGCGCAAGGCCCGGGCGTGGGTGGCGCAGCACGTGCAGCCGTTCCTCCCGGCCACCCGCATCACCTGCGTCACCGTCGGCAACGAGGTGCTCTCCGGCAAGGACACGGCGGCGATGCAGAGCCTCCTCCCGGCCATGCAGTCCGTCCACCAGGCGCTGCTCGACCTCGGCCTCGCCGGCAGGGTGAACGTCTCGACGGCGCACTCCGTCAACATCCTCGCCACCAGCTACCCGCCGTCCGCCGGCGCGTTCCGGGAGGACCTCGCGCAGTACATCCAGCCGCTGCTCAACTTCCACGCCGAGGTCGGCTCGCCGTTCCTCGTCAACGCCTACCCGTTCTTCGCCTACAAGGCGAGCCCGGCGAGCGTGTCGCTGCCGTACGTGCTGTTCGAGCCCAACCCGGGCGTACGCGACCCGGCCACCAACCTCACCTACGACAACATGCTGTACGCCCAGATCGACGCCGTGTACGCCGCCATGAAGGCCATGGGCCACGCCGACATCACCGTGAGGATCTCCGAGACCGGGTGGCCGTCCAAGGGGGACGACGACGAGGTGGGCGCCACCCCGCAGAACGCCGCCGCGTACAACGGCAACCTCATGAAGCGGATCGCCGCCGGGGAAGGGACGCCGCTCAAGCCGGCCGTCCCCGTCGACGTGTTCGTGTTCGCGCTCTTCAACGAGGACATGAAGCCCGGCCCCTCGTCGGAGAGGAACTACGGCCTGTTCTACCCCAACGGCACGCCGGTGTACAACATCGGCTTCGACGCCGCGTCCTTCAGCCCGTCGCCGACGACATCCACGTTTTCCTCCTCTTCCAGGCCAACGGTAACAAAAAAGAATTTGAATTTTATTCTACTTCGAAATTTTGAATATGCAAATTTGAGTTTCATAGAACAAAGAGAACTTCTAATGGCCATGTCTTCTCTTATTGTCTTACCAGAAAAAATGTCCGTGCGTTGCAACGGGTGAAAACTATTTTAATTTTATTATAGTTAAGATGAAATTTATTGTGGAATTTCGCTTGGATATATATATTTTTAGAAAATCATGAGTTGCAATTAGGAGTCTATTCGTCTAAAGTTATCATGCAAGTTTTCTTATACAACTCCTTATCTATTTCCAAAAGCGAACGAATTTAAAAACCGACTCATACATGAATGACATATCAAAGTACCAACAAAAATATCTTCAATTTTTATATATTGTCTTATTAGAAAACGTACATTCTTTTTTTCGTCGGACCTTAATATAATGGTAAGTTTCTGATTGCAAATTATTTTGCTTATGTTCGTTCTGCAGAGTACATTTCTGATGGGGGTGGTTGTCCTACTCGCCGCATTCCTCCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA017960